RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 Q6ZQY7 126 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 Q8N9L7 120 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 C1orf134Q5TEV5 83 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 KIF25-AS1Q9Y6Z4 181 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 LYPD5Q6UWN5 251 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 PRB4P10163 310 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-202ENST00000261517 APCP25054 2843 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 LAMA5O15230 3695 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 FAM30AQ9NZY2 134 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 CEMP1Q6PRD7 247 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-202ENST00000261517 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 IGLV5-52A0A0A0MRZ9 124 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 MAPKAPK5-AS1Q8N8E1 139 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 DEFB4AO15263 64 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 ASH1LQ9NR48 2969 aaKnown RBP3.06□□□□□ -1.92
VPS13C-202ENST00000261517 AVPP01185 164 aa3.06□□□□□ -1.92
VPS13C-202ENST00000261517 IGKV2-24A0A0C4DH68 120 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 LINC00575Q6W349 94 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 C1orf137Q5JT78 98 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 FAM19A5Q7Z5A7 132 aaPredicted RBP3.05□□□□□ -1.92
VPS13C-202ENST00000261517 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 SPATA3Q8NHX4 192 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 DEFB1P60022 68 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 LOC110117498A0A087WWA1 95 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 ENHOQ6UWT2 76 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 C20orf197Q8N268 126 aa3.05□□□□□ -1.92
VPS13C-202ENST00000261517 TRBV7-7A0A0K0K1E9 115 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 DMDP11532 3685 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 LINC00526Q96FQ7 95 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 DNAH10OSP0CZ25 163 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 CELSR2Q9HCU4 2923 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 DCHS2Q6V1P9 2916 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
VPS13C-202ENST00000261517 HCG22E2RYF7 251 aa3.04□□□□□ -1.92
VPS13C-202ENST00000261517 ERC2-IT1O76042 136 aa3.03□□□□□ -1.92
VPS13C-202ENST00000261517 ESM1Q9NQ30 184 aa3.03□□□□□ -1.92
VPS13C-202ENST00000261517 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
VPS13C-202ENST00000261517 TTTY13Q9BZ97 58 aa3.03□□□□□ -1.92
VPS13C-202ENST00000261517 LINC00310P59036 64 aa3.03□□□□□ -1.92
VPS13C-202ENST00000261517 C10orf99Q6UWK7 81 aa3.03□□□□□ -1.92
VPS13C-202ENST00000261517 MXRA5Q9NR99 2828 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 CDSNQ15517 529 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 PLA2G2DQ9UNK4 145 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 IGLV4-60A0A075B6I1 120 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 C16orf90A8MZG2 172 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 SDIM1Q6ZPB5 146 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 Q6ZS46 218 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 C3orf84H3BNL1 204 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 EDN2P20800 178 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 UNQ6190/PRO20217Q6UXQ8 127 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 Q9BRP9 147 aa3.02□□□□□ -1.93
VPS13C-202ENST00000261517 MT-ATP8P03928 68 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 C6orf223Q8N319 242 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 URB1-AS1Q96HZ7 61 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 C8orf87E5RJ46 101 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 LINC00337Q8N6G1 96 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 A0A1W2PPR1 153 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 Q6ZTC4 211 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 C18orf65Q6ZTR6 163 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 A0A096LNJ9 63 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 WDFY3Q8IZQ1 3526 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 LINC00315P59091 139 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 LY6G6CO95867 125 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 ASPMQ8IZT6 3477 aa3.01□□□□□ -1.93
VPS13C-202ENST00000261517 LOC100131303A0A0U1RQF7 123 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 ELOF1P60002 83 aaKnown RBP3□□□□□ -1.93
VPS13C-202ENST00000261517 Q8NBF4 154 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 RPS28P62857 69 aaKnown RBP3□□□□□ -1.93
VPS13C-202ENST00000261517 CELA1Q9UNI1 258 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 LINC00612Q8N6U2 182 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 IGKV2-28A0A075B6P5 120 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 IGKV2D-28P01615 120 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 MOBPQ13875 183 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 TLX1NBP0CAT3 122 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 Q6ZRP5 223 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 SBSPONQ8IVN8 264 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 SPAG11AQ6PDA7 123 aa3□□□□□ -1.93
VPS13C-202ENST00000261517 COX6A2Q02221 97 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 Q8NAQ8 132 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 OXLD1Q5BKU9 147 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 WFDC10BQ8IUB3 73 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 Q6ZRX8 168 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-202ENST00000261517 X6R8D5 127 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 LINC00694P0DN24 101 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 WFDC10AQ9H1F0 79 aa2.99□□□□□ -1.93
VPS13C-202ENST00000261517 PLA2G1BP04054 148 aaKnown RBP2.98□□□□□ -1.93
VPS13C-202ENST00000261517 LINC00336Q6ZUF6 198 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 NBDYA0A0U1RRE5 68 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 WWC2-AS2Q96NR7 200 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 WIPF1O43516 503 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 CRYGAP11844 174 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 TSPEAR-AS2P59090 65 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 ADAMTSL4-AS1Q5T5F5 129 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 SLPIP03973 132 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 KRTAP10-9P60411 292 aa2.98□□□□□ -1.93
VPS13C-202ENST00000261517 IGLV6-57P01721 117 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms