RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
VHL-201ENST00000256474 Q8N814 137 aa9.24□□□□□ -0.93
VHL-201ENST00000256474 MAST4O15021 2626 aa9.24□□□□□ -0.93
VHL-201ENST00000256474 A0A0U1RQV1 116 aa9.23□□□□□ -0.93
VHL-201ENST00000256474 STAB1Q9NY15 2570 aa9.23□□□□□ -0.93
VHL-201ENST00000256474 FBN1P35555 2871 aaKnown RBP9.23□□□□□ -0.93
VHL-201ENST00000256474 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
VHL-201ENST00000256474 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
VHL-201ENST00000256474 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
VHL-201ENST00000256474 SCXQ7RTU7 201 aa9.22□□□□□ -0.93
VHL-201ENST00000256474 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
VHL-201ENST00000256474 C9orf66Q5T8R8 295 aa9.22□□□□□ -0.93
VHL-201ENST00000256474 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
VHL-201ENST00000256474 IMUPQ9GZP8 106 aa9.22□□□□□ -0.93
VHL-201ENST00000256474 APOC4P55056 127 aa9.21□□□□□ -0.93
VHL-201ENST00000256474 NANOS2P60321 138 aaKnown RBP9.21□□□□□ -0.93
VHL-201ENST00000256474 KIAA0087Q14695 138 aa9.21□□□□□ -0.93
VHL-201ENST00000256474 Q6ZQY7 126 aa9.21□□□□□ -0.93
VHL-201ENST00000256474 SPART-AS1P0CW21 52 aa9.21□□□□□ -0.94
VHL-201ENST00000256474 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.94
VHL-201ENST00000256474 UQCRQO14949 82 aa9.2□□□□□ -0.94
VHL-201ENST00000256474 OXLD1Q5BKU9 147 aa9.2□□□□□ -0.94
VHL-201ENST00000256474 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
VHL-201ENST00000256474 USP17L23D6RBM5 183 aa9.19□□□□□ -0.94
VHL-201ENST00000256474 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
VHL-201ENST00000256474 TMEM256-PLSCR3K7ERE1 68 aa9.19□□□□□ -0.94
VHL-201ENST00000256474 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
VHL-201ENST00000256474 ATOX1O00244 68 aa9.18□□□□□ -0.94
VHL-201ENST00000256474 UBL5Q9BZL1 73 aa9.18□□□□□ -0.94
VHL-201ENST00000256474 COX7CP15954 63 aa9.18□□□□□ -0.94
VHL-201ENST00000256474 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
VHL-201ENST00000256474 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
VHL-201ENST00000256474 BAHCC1Q9P281 2608 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 M0R2N4 97 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 CCKP06307 115 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
VHL-201ENST00000256474 RBM3P98179 157 aaKnown RBP9.17□□□□□ -0.94
VHL-201ENST00000256474 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
VHL-201ENST00000256474 DEFB105AQ8NG35 78 aa9.16□□□□□ -0.94
VHL-201ENST00000256474 GHRHP01286 108 aa9.16□□□□□ -0.94
VHL-201ENST00000256474 JMJD7-PLA2G4BH0Y9G9 81 aa9.15□□□□□ -0.94
VHL-201ENST00000256474 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.95
VHL-201ENST00000256474 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
VHL-201ENST00000256474 Q6JHZ5 121 aa9.14□□□□□ -0.95
VHL-201ENST00000256474 LINC00612Q8N6U2 182 aa9.13□□□□□ -0.95
VHL-201ENST00000256474 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
VHL-201ENST00000256474 KMT2BQ9UMN6 2715 aaPredicted RBP9.13□□□□□ -0.95
VHL-201ENST00000256474 Q8NAQ8 132 aa9.13□□□□□ -0.95
VHL-201ENST00000256474 COL6A5A8TX70 2615 aa9.13□□□□□ -0.95
VHL-201ENST00000256474 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
VHL-201ENST00000256474 LELP1Q5T871 98 aa9.12□□□□□ -0.95
VHL-201ENST00000256474 C20orf197Q8N268 126 aa9.12□□□□□ -0.95
VHL-201ENST00000256474 C6orf48Q9UBA6 75 aa9.12□□□□□ -0.95
VHL-201ENST00000256474 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
VHL-201ENST00000256474 J3KT08 172 aa9.11□□□□□ -0.95
VHL-201ENST00000256474 Q6ZTC4 211 aa9.11□□□□□ -0.95
VHL-201ENST00000256474 COX17Q14061 63 aa9.11□□□□□ -0.95
VHL-201ENST00000256474 KPRPQ5T749 579 aaPredicted RBP9.11□□□□□ -0.95
VHL-201ENST00000256474 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
VHL-201ENST00000256474 LYPD5Q6UWN5 251 aa9.1□□□□□ -0.95
VHL-201ENST00000256474 MIFP14174 115 aa9.1□□□□□ -0.95
VHL-201ENST00000256474 SERP2Q8N6R1 65 aa9.09□□□□□ -0.95
VHL-201ENST00000256474 NDUFC2O95298 119 aa9.09□□□□□ -0.95
VHL-201ENST00000256474 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
VHL-201ENST00000256474 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
VHL-201ENST00000256474 Q6ZRU5 148 aa9.07□□□□□ -0.96
VHL-201ENST00000256474 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
VHL-201ENST00000256474 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
VHL-201ENST00000256474 BRK1Q8WUW1 75 aa9.07□□□□□ -0.96
VHL-201ENST00000256474 COX7BP24311 80 aa9.06□□□□□ -0.96
VHL-201ENST00000256474 LYSTQ99698 3801 aa9.06□□□□□ -0.96
VHL-201ENST00000256474 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
VHL-201ENST00000256474 Q8N9L7 120 aa9.06□□□□□ -0.96
VHL-201ENST00000256474 SNURFQ9Y675 71 aa9.06□□□□□ -0.96
VHL-201ENST00000256474 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
VHL-201ENST00000256474 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.05□□□□□ -0.96
VHL-201ENST00000256474 RPL37AP8A6NKH3 93 aa9.04□□□□□ -0.96
VHL-201ENST00000256474 C3orf84H3BNL1 204 aa9.04□□□□□ -0.96
VHL-201ENST00000256474 Q6ZVQ6 151 aa9.03□□□□□ -0.96
VHL-201ENST00000256474 Q6ZQT0 140 aa9.03□□□□□ -0.96
VHL-201ENST00000256474 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
VHL-201ENST00000256474 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
VHL-201ENST00000256474 ESRGQ1W209 222 aa9.01□□□□□ -0.97
VHL-201ENST00000256474 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
VHL-201ENST00000256474 TRAV10A0A0B4J240 114 aa9.01□□□□□ -0.97
VHL-201ENST00000256474 CRYGAP11844 174 aa9.01□□□□□ -0.97
VHL-201ENST00000256474 IGLV6-57P01721 117 aa9□□□□□ -0.97
VHL-201ENST00000256474 MUC7Q8TAX7 377 aa9□□□□□ -0.97
VHL-201ENST00000256474 DEFB131BA0A096LNP1 70 aa9□□□□□ -0.97
VHL-201ENST00000256474 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
VHL-201ENST00000256474 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
VHL-201ENST00000256474 LINC00167Q96N53 147 aa8.98□□□□□ -0.97
VHL-201ENST00000256474 Q6ZRP5 223 aa8.97□□□□□ -0.97
VHL-201ENST00000256474 KRTAP10-11P60412 298 aa8.96□□□□□ -0.98
VHL-201ENST00000256474 VPREB1P12018 145 aa8.95□□□□□ -0.98
VHL-201ENST00000256474 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
VHL-201ENST00000256474 RMI2Q96E14 147 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms