RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CAMK2N2Q96S95 79 aa12.61□□□□□ -0.39
LRP3-201ENST00000253193 LINC00612Q8N6U2 182 aa12.61□□□□□ -0.39
LRP3-201ENST00000253193 LELP1Q5T871 98 aa12.6□□□□□ -0.39
LRP3-201ENST00000253193 KIAA0087Q14695 138 aa12.6□□□□□ -0.39
LRP3-201ENST00000253193 C2orf48Q96LS8 159 aa12.6□□□□□ -0.39
LRP3-201ENST00000253193 RBM3P98179 157 aaKnown RBP12.6□□□□□ -0.39
LRP3-201ENST00000253193 COX7CP15954 63 aa12.59□□□□□ -0.39
LRP3-201ENST00000253193 TRAV23DV6A0A075B6W5 121 aa12.58□□□□□ -0.4
LRP3-201ENST00000253193 CCKP06307 115 aa12.58□□□□□ -0.4
LRP3-201ENST00000253193 DSCR8Q96T75 97 aa12.58□□□□□ -0.4
LRP3-201ENST00000253193 Q6ZQY7 126 aa12.58□□□□□ -0.4
LRP3-201ENST00000253193 ENHOQ6UWT2 76 aa12.58□□□□□ -0.4
LRP3-201ENST00000253193 RETNQ9HD89 108 aa12.57□□□□□ -0.4
LRP3-201ENST00000253193 NDUFC2O95298 119 aa12.57□□□□□ -0.4
LRP3-201ENST00000253193 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
LRP3-201ENST00000253193 Q6JHZ5 121 aa12.55□□□□□ -0.4
LRP3-201ENST00000253193 F8P00451 2351 aa12.55□□□□□ -0.4
LRP3-201ENST00000253193 IGKV2D-24A0A075B6R9 120 aa12.55□□□□□ -0.4
LRP3-201ENST00000253193 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
LRP3-201ENST00000253193 LINC01561Q8N1V8 128 aa12.54□□□□□ -0.4
LRP3-201ENST00000253193 Q8NAQ8 132 aa12.54□□□□□ -0.4
LRP3-201ENST00000253193 PDZD2O15018 2839 aa12.54□□□□□ -0.4
LRP3-201ENST00000253193 TRBV10-3A0A0K0K1G6 114 aa12.53□□□□□ -0.4
LRP3-201ENST00000253193 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
LRP3-201ENST00000253193 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
LRP3-201ENST00000253193 TENM1Q9UKZ4 2725 aa12.52□□□□□ -0.41
LRP3-201ENST00000253193 KPRPQ5T749 579 aaPredicted RBP12.52□□□□□ -0.41
LRP3-201ENST00000253193 LINC00575Q6W349 94 aa12.52□□□□□ -0.41
LRP3-201ENST00000253193 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
LRP3-201ENST00000253193 LYPD5Q6UWN5 251 aa12.51□□□□□ -0.41
LRP3-201ENST00000253193 FAM19A1Q7Z5A9 133 aa12.51□□□□□ -0.41
LRP3-201ENST00000253193 Q8NDZ9 215 aa12.5□□□□□ -0.41
LRP3-201ENST00000253193 C1orf43Q9BWL3 253 aa12.5□□□□□ -0.41
LRP3-201ENST00000253193 GHRHP01286 108 aa12.49□□□□□ -0.41
LRP3-201ENST00000253193 OBSCN-AS1Q96MR7 158 aa12.49□□□□□ -0.41
LRP3-201ENST00000253193 NSD1Q96L73 2696 aaPredicted RBP12.49□□□□□ -0.41
LRP3-201ENST00000253193 UPK3BQ9BT76 320 aa12.48□□□□□ -0.41
LRP3-201ENST00000253193 COX7BP24311 80 aa12.47□□□□□ -0.41
LRP3-201ENST00000253193 Q6ZTC4 211 aa12.47□□□□□ -0.41
LRP3-201ENST00000253193 DEFB105AQ8NG35 78 aa12.47□□□□□ -0.41
LRP3-201ENST00000253193 MAST4O15021 2626 aa12.47□□□□□ -0.41
LRP3-201ENST00000253193 C6orf48Q9UBA6 75 aa12.47□□□□□ -0.41
LRP3-201ENST00000253193 NOTCH1P46531 2555 aa12.46□□□□□ -0.41
LRP3-201ENST00000253193 CRYGAP11844 174 aa12.46□□□□□ -0.41
LRP3-201ENST00000253193 SCXQ7RTU7 201 aa12.46□□□□□ -0.41
LRP3-201ENST00000253193 SERP2Q8N6R1 65 aa12.46□□□□□ -0.41
LRP3-201ENST00000253193 FAM19A5Q7Z5A7 132 aaPredicted RBP12.46□□□□□ -0.42
LRP3-201ENST00000253193 ZNF73O43830 326 aaPredicted RBP12.45□□□□□ -0.42
LRP3-201ENST00000253193 HIVEP1P15822 2718 aa12.45□□□□□ -0.42
LRP3-201ENST00000253193 OTOGQ6ZRI0 2925 aa12.43□□□□□ -0.42
LRP3-201ENST00000253193 NKAPP1Q8N9T2 125 aa12.43□□□□□ -0.42
LRP3-201ENST00000253193 STAB1Q9NY15 2570 aa12.42□□□□□ -0.42
LRP3-201ENST00000253193 J3KT08 172 aa12.41□□□□□ -0.42
LRP3-201ENST00000253193 A0A0J9YWU9 116 aa12.41□□□□□ -0.42
LRP3-201ENST00000253193 Q6ZRU5 148 aa12.4□□□□□ -0.42
LRP3-201ENST00000253193 C20orf197Q8N268 126 aa12.4□□□□□ -0.42
LRP3-201ENST00000253193 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
LRP3-201ENST00000253193 M0R2N4 97 aa12.39□□□□□ -0.43
LRP3-201ENST00000253193 ATP5EP2Q5VTU8 51 aa12.38□□□□□ -0.43
LRP3-201ENST00000253193 PRR34Q9NV39 138 aa12.38□□□□□ -0.43
LRP3-201ENST00000253193 OXTP01178 125 aa12.37□□□□□ -0.43
LRP3-201ENST00000253193 MRAPQ8TCY5 172 aa12.37□□□□□ -0.43
LRP3-201ENST00000253193 IGLV6-57P01721 117 aa12.36□□□□□ -0.43
LRP3-201ENST00000253193 C11orf45Q8TAV5 145 aa12.36□□□□□ -0.43
LRP3-201ENST00000253193 Q6ZQT0 140 aa12.35□□□□□ -0.43
LRP3-201ENST00000253193 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
LRP3-201ENST00000253193 LINC00167Q96N53 147 aa12.35□□□□□ -0.43
LRP3-201ENST00000253193 DPH3Q96FX2 82 aa12.35□□□□□ -0.43
LRP3-201ENST00000253193 ESRGQ1W209 222 aa12.35□□□□□ -0.43
LRP3-201ENST00000253193 M0R378 163 aa12.34□□□□□ -0.43
LRP3-201ENST00000253193 PRB2P02812 416 aaPredicted RBP12.34□□□□□ -0.43
LRP3-201ENST00000253193 Q6ZVQ6 151 aa12.34□□□□□ -0.43
LRP3-201ENST00000253193 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
LRP3-201ENST00000253193 SYCNQ0VAF6 134 aa12.33□□□□□ -0.44
LRP3-201ENST00000253193 ANK3Q12955 4377 aaKnown RBP12.33□□□□□ -0.44
LRP3-201ENST00000253193 PDE6GP18545 87 aa12.32□□□□□ -0.44
LRP3-201ENST00000253193 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
LRP3-201ENST00000253193 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.32□□□□□ -0.44
LRP3-201ENST00000253193 NDUFC2-KCTD14E9PQ53 114 aa12.31□□□□□ -0.44
LRP3-201ENST00000253193 RPL37AP8A6NKH3 93 aa12.3□□□□□ -0.44
LRP3-201ENST00000253193 TRRAPQ9Y4A5 3859 aa12.29□□□□□ -0.44
LRP3-201ENST00000253193 C3orf84H3BNL1 204 aa12.29□□□□□ -0.44
LRP3-201ENST00000253193 TMEM258P61165 79 aa12.28□□□□□ -0.44
LRP3-201ENST00000253193 GVQW2A0A096LPI5 108 aaPredicted RBP12.27□□□□□ -0.45
LRP3-201ENST00000253193 H3BQ85 93 aa12.27□□□□□ -0.45
LRP3-201ENST00000253193 NREPQ16612 68 aa12.27□□□□□ -0.45
LRP3-201ENST00000253193 VPREB1P12018 145 aa12.27□□□□□ -0.45
LRP3-201ENST00000253193 C4orf26Q17RF5 130 aa12.27□□□□□ -0.45
LRP3-201ENST00000253193 SNURFQ9Y675 71 aa12.27□□□□□ -0.45
LRP3-201ENST00000253193 KRTAP10-11P60412 298 aa12.25□□□□□ -0.45
LRP3-201ENST00000253193 Q6ZRP5 223 aa12.25□□□□□ -0.45
LRP3-201ENST00000253193 ELOF1P60002 83 aaKnown RBP12.25□□□□□ -0.45
LRP3-201ENST00000253193 LOC110117498A0A087WWA1 95 aa12.24□□□□□ -0.45
LRP3-201ENST00000253193 COL6A5A8TX70 2615 aa12.24□□□□□ -0.45
LRP3-201ENST00000253193 PKD1L1Q8TDX9 2849 aa12.24□□□□□ -0.45
LRP3-201ENST00000253193 ETDCA0A1B0GVM5 59 aa12.24□□□□□ -0.45
LRP3-201ENST00000253193 Q8N9L7 120 aa12.23□□□□□ -0.45
LRP3-201ENST00000253193 C15orf56Q8N910 161 aa12.23□□□□□ -0.45
LRP3-201ENST00000253193 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
LRP3-201ENST00000253193 RPS28P62857 69 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms