RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
DDX39A-201ENST00000242776 SMIM6P0DI80 62 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 S100A12P80511 92 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
DDX39A-201ENST00000242776 ZNF625Q96I27 306 aaPredicted RBP8.51□□□□□ -1.05
DDX39A-201ENST00000242776 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 SPATA45Q537H7 98 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 Q6ZRP5 223 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 PAM16Q9Y3D7 125 aa8.51□□□□□ -1.05
DDX39A-201ENST00000242776 ZNF815PA8K554 130 aa8.5□□□□□ -1.05
DDX39A-201ENST00000242776 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
DDX39A-201ENST00000242776 C10orf25Q5T742 122 aa8.5□□□□□ -1.05
DDX39A-201ENST00000242776 KRTAP9-2Q9BYQ4 174 aa8.5□□□□□ -1.05
DDX39A-201ENST00000242776 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
DDX39A-201ENST00000242776 LOC107984640A0A0U1RRK4 108 aa8.48□□□□□ -1.05
DDX39A-201ENST00000242776 COX17Q14061 63 aa8.47□□□□□ -1.05
DDX39A-201ENST00000242776 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
DDX39A-201ENST00000242776 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.05
DDX39A-201ENST00000242776 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.05
DDX39A-201ENST00000242776 NDUFC2-KCTD14E9PQ53 114 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 GAGE2BQ13066 116 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 C9orf116Q5BN46 136 aaPredicted RBP8.45□□□□□ -1.06
DDX39A-201ENST00000242776 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 TTTY13Q9BZ97 58 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 LINC00474Q9P2X8 69 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 A0A0J9YXY3 114 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 COX8AP10176 69 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 PFN2P35080 140 aa8.45□□□□□ -1.06
DDX39A-201ENST00000242776 LINC00158P58513 81 aa8.44□□□□□ -1.06
DDX39A-201ENST00000242776 PRR26Q8N8Z3 221 aa8.44□□□□□ -1.06
DDX39A-201ENST00000242776 TIMM17BO60830 172 aa8.43□□□□□ -1.06
DDX39A-201ENST00000242776 SMIM13P0DJ93 91 aa8.43□□□□□ -1.06
DDX39A-201ENST00000242776 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
DDX39A-201ENST00000242776 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
DDX39A-201ENST00000242776 DLEU1O43261 78 aa8.42□□□□□ -1.06
DDX39A-201ENST00000242776 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
DDX39A-201ENST00000242776 BOD1L2Q8IYS8 172 aa8.42□□□□□ -1.06
DDX39A-201ENST00000242776 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
DDX39A-201ENST00000242776 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 GAGE2EQ4V326 116 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 C14orf144Q96I85 54 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 C12orf57Q99622 126 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 GAGE2DQ9UEU5 116 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 MUC2Q02817 5179 aa8.41□□□□□ -1.06
DDX39A-201ENST00000242776 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
DDX39A-201ENST00000242776 PRR4Q16378 134 aa8.4□□□□□ -1.06
DDX39A-201ENST00000242776 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
DDX39A-201ENST00000242776 PHF5AQ7RTV0 110 aaKnown RBP8.39□□□□□ -1.07
DDX39A-201ENST00000242776 COPS9Q8WXC6 57 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 Q6ZVH6 145 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 SPANXDQ9BXN6 97 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
DDX39A-201ENST00000242776 LINC00518Q8N0U6 118 aa8.37□□□□□ -1.07
DDX39A-201ENST00000242776 LITAFQ99732 161 aa8.37□□□□□ -1.07
DDX39A-201ENST00000242776 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
DDX39A-201ENST00000242776 DAND5Q8N907 189 aa8.36□□□□□ -1.07
DDX39A-201ENST00000242776 SPANXB1Q9NS25 103 aaPredicted RBP8.36□□□□□ -1.07
DDX39A-201ENST00000242776 TSTD3H0UI37 97 aa8.35□□□□□ -1.07
DDX39A-201ENST00000242776 C9orf129Q5T035 196 aaKnown RBP8.35□□□□□ -1.07
DDX39A-201ENST00000242776 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
DDX39A-201ENST00000242776 HIGD1BQ9P298 99 aa8.35□□□□□ -1.07
DDX39A-201ENST00000242776 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
DDX39A-201ENST00000242776 A0A0U1RQV1 116 aa8.34□□□□□ -1.07
DDX39A-201ENST00000242776 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
DDX39A-201ENST00000242776 IFITM1P13164 125 aa8.34□□□□□ -1.07
DDX39A-201ENST00000242776 NPC2P61916 151 aa8.33□□□□□ -1.08
DDX39A-201ENST00000242776 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
DDX39A-201ENST00000242776 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
DDX39A-201ENST00000242776 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
DDX39A-201ENST00000242776 PRO1933Q9H354 126 aa8.33□□□□□ -1.08
DDX39A-201ENST00000242776 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
DDX39A-201ENST00000242776 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
DDX39A-201ENST00000242776 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
DDX39A-201ENST00000242776 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
DDX39A-201ENST00000242776 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
DDX39A-201ENST00000242776 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
DDX39A-201ENST00000242776 PPDPFQ9H3Y8 114 aa8.32□□□□□ -1.08
DDX39A-201ENST00000242776 KRTAP11-1Q8IUC1 163 aa8.31□□□□□ -1.08
DDX39A-201ENST00000242776 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
DDX39A-201ENST00000242776 H0Y9J4 135 aa8.3□□□□□ -1.08
DDX39A-201ENST00000242776 TAL2Q16559 108 aa8.3□□□□□ -1.08
DDX39A-201ENST00000242776 IGLV5-37A0A075B6J1 123 aa8.29□□□□□ -1.08
DDX39A-201ENST00000242776 FAM168BA1KXE4 195 aa8.29□□□□□ -1.08
DDX39A-201ENST00000242776 NDUFC2O95298 119 aa8.29□□□□□ -1.08
DDX39A-201ENST00000242776 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
DDX39A-201ENST00000242776 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
DDX39A-201ENST00000242776 M0QXV9 152 aa8.28□□□□□ -1.08
DDX39A-201ENST00000242776 TSPAN13O95857 204 aa8.28□□□□□ -1.08
DDX39A-201ENST00000242776 VPREB1P12018 145 aa8.28□□□□□ -1.08
DDX39A-201ENST00000242776 HSD52Q0P140 79 aa8.28□□□□□ -1.08
DDX39A-201ENST00000242776 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
DDX39A-201ENST00000242776 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 LBHQ53QV2 105 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-201ENST00000242776 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms