RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 ACYP1P07311 99 aa12.23□□□□□ -0.45
USP18-201ENST00000215794 H3BNG1 76 aa12.22□□□□□ -0.45
USP18-201ENST00000215794 RPL28P46779 137 aaKnown RBP12.22□□□□□ -0.45
USP18-201ENST00000215794 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
USP18-201ENST00000215794 CSMD3Q7Z407 3707 aa12.22□□□□□ -0.45
USP18-201ENST00000215794 C10orf25Q5T742 122 aa12.22□□□□□ -0.45
USP18-201ENST00000215794 CXCL5P42830 114 aa12.21□□□□□ -0.45
USP18-201ENST00000215794 SPAG11BQ08648 103 aa12.21□□□□□ -0.45
USP18-201ENST00000215794 ESRGQ1W209 222 aa12.2□□□□□ -0.46
USP18-201ENST00000215794 IMUPQ9GZP8 106 aa12.2□□□□□ -0.46
USP18-201ENST00000215794 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
USP18-201ENST00000215794 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
USP18-201ENST00000215794 PRR3P79522 188 aaKnown RBP12.19□□□□□ -0.46
USP18-201ENST00000215794 UNQ6190/PRO20217Q6UXQ8 127 aa12.19□□□□□ -0.46
USP18-201ENST00000215794 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
USP18-201ENST00000215794 KLK5Q9Y337 293 aaPredicted RBP12.19□□□□□ -0.46
USP18-201ENST00000215794 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
USP18-201ENST00000215794 TMEM126AQ9H061 195 aa12.18□□□□□ -0.46
USP18-201ENST00000215794 LYSTQ99698 3801 aa12.18□□□□□ -0.46
USP18-201ENST00000215794 DNAH7Q8WXX0 4024 aa12.18□□□□□ -0.46
USP18-201ENST00000215794 COX17Q14061 63 aa12.17□□□□□ -0.46
USP18-201ENST00000215794 TRACP01848 142 aa12.16□□□□□ -0.46
USP18-201ENST00000215794 Q8NDZ9 215 aa12.16□□□□□ -0.46
USP18-201ENST00000215794 Q9HAA7 133 aa12.15□□□□□ -0.46
USP18-201ENST00000215794 A0A087WYN8 130 aa12.14□□□□□ -0.47
USP18-201ENST00000215794 STARD9Q9P2P6 4700 aa12.12□□□□□ -0.47
USP18-201ENST00000215794 KRTAP26-1Q6PEX3 210 aa12.12□□□□□ -0.47
USP18-201ENST00000215794 C22orf24Q9Y442 160 aa12.11□□□□□ -0.47
USP18-201ENST00000215794 NCR3O14931 201 aa12.1□□□□□ -0.47
USP18-201ENST00000215794 BAALC-AS2P0C853 105 aa12.1□□□□□ -0.47
USP18-201ENST00000215794 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
USP18-201ENST00000215794 NDUFC2O95298 119 aa12.1□□□□□ -0.47
USP18-201ENST00000215794 TRAV10A0A0B4J240 114 aa12.09□□□□□ -0.47
USP18-201ENST00000215794 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
USP18-201ENST00000215794 LINC00643Q86TS7 51 aa12.07□□□□□ -0.48
USP18-201ENST00000215794 H0YGX0 51 aa12.07□□□□□ -0.48
USP18-201ENST00000215794 LECT2O14960 151 aa12.06□□□□□ -0.48
USP18-201ENST00000215794 LINC01556Q5JQF7 62 aa12.06□□□□□ -0.48
USP18-201ENST00000215794 PLECQ15149 4684 aaKnown RBP12.06□□□□□ -0.48
USP18-201ENST00000215794 C15orf56Q8N910 161 aa12.05□□□□□ -0.48
USP18-201ENST00000215794 TENM2Q9NT68 2774 aa12.04□□□□□ -0.48
USP18-201ENST00000215794 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
USP18-201ENST00000215794 DNAL4O96015 105 aa12.04□□□□□ -0.48
USP18-201ENST00000215794 ZNF561-AS1K7EIQ3 104 aa12.04□□□□□ -0.48
USP18-201ENST00000215794 DYNC2H1Q8NCM8 4307 aaKnown RBP12.03□□□□□ -0.48
USP18-201ENST00000215794 SLPIP03973 132 aa12.03□□□□□ -0.48
USP18-201ENST00000215794 XAGE1AQ9HD64 81 aa12.03□□□□□ -0.48
USP18-201ENST00000215794 IGKV2D-24A0A075B6R9 120 aa12.02□□□□□ -0.48
USP18-201ENST00000215794 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.48
USP18-201ENST00000215794 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.48
USP18-201ENST00000215794 INAFM2P0DMQ5 153 aa12.01□□□□□ -0.49
USP18-201ENST00000215794 S100A7L2Q5SY68 101 aa12.01□□□□□ -0.49
USP18-201ENST00000215794 C9orf129Q5T035 196 aaKnown RBP12.01□□□□□ -0.49
USP18-201ENST00000215794 Q6ZRU5 148 aa12.01□□□□□ -0.49
USP18-201ENST00000215794 LINC00588Q9Y4M8 146 aa12.01□□□□□ -0.49
USP18-201ENST00000215794 RPL18AQ02543 176 aaKnown RBP12□□□□□ -0.49
USP18-201ENST00000215794 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
USP18-201ENST00000215794 MUC7Q8TAX7 377 aa12□□□□□ -0.49
USP18-201ENST00000215794 UQCRQO14949 82 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 DNAH10OSP0CZ25 163 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 C3orf22Q8N5N4 141 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 C6orf99Q4VX62 202 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
USP18-201ENST00000215794 F8WDY8 70 aa11.97□□□□□ -0.49
USP18-201ENST00000215794 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
USP18-201ENST00000215794 Q8N814 137 aa11.95□□□□□ -0.5
USP18-201ENST00000215794 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
USP18-201ENST00000215794 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
USP18-201ENST00000215794 ORMDL1Q9P0S3 153 aa11.93□□□□□ -0.5
USP18-201ENST00000215794 TRBV10-3A0A0K0K1G6 114 aa11.92□□□□□ -0.5
USP18-201ENST00000215794 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
USP18-201ENST00000215794 LINC00167Q96N53 147 aa11.92□□□□□ -0.5
USP18-201ENST00000215794 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
USP18-201ENST00000215794 CASC10Q5T4H9 136 aa11.92□□□□□ -0.5
USP18-201ENST00000215794 WWC2-AS2Q96NR7 200 aa11.91□□□□□ -0.5
USP18-201ENST00000215794 C14orf132Q9NPU4 83 aa11.91□□□□□ -0.5
USP18-201ENST00000215794 NDUFC2-KCTD14E9PQ53 114 aa11.9□□□□□ -0.5
USP18-201ENST00000215794 ATOX1O00244 68 aa11.9□□□□□ -0.5
USP18-201ENST00000215794 Q6ZRP5 223 aa11.9□□□□□ -0.5
USP18-201ENST00000215794 VPREB1P12018 145 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 COX7CP15954 63 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 A0A1B0GX51 115 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 OBSCN-AS1Q96MR7 158 aa11.89□□□□□ -0.51
USP18-201ENST00000215794 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
USP18-201ENST00000215794 TRAV23DV6A0A075B6W5 121 aa11.87□□□□□ -0.51
USP18-201ENST00000215794 J3KT08 172 aa11.86□□□□□ -0.51
USP18-201ENST00000215794 CRYGAP11844 174 aa11.86□□□□□ -0.51
USP18-201ENST00000215794 HIST1H4AP62805 103 aaKnown RBP11.85□□□□□ -0.51
USP18-201ENST00000215794 RPS28P62857 69 aaKnown RBP11.85□□□□□ -0.51
USP18-201ENST00000215794 USP17L23D6RBM5 183 aa11.84□□□□□ -0.51
USP18-201ENST00000215794 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
USP18-201ENST00000215794 KMT2AQ03164 3969 aa11.83□□□□□ -0.52
USP18-201ENST00000215794 UBE2DNLQ8IWF7 75 aa11.83□□□□□ -0.52
USP18-201ENST00000215794 DIRC1Q969H9 104 aa11.83□□□□□ -0.52
USP18-201ENST00000215794 UPK3BQ9BT76 320 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms