RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
CTNS-201ENST00000046640 A0A1B0GX51 115 aa8.95□□□□□ -0.98
CTNS-201ENST00000046640 J3KT08 172 aa8.95□□□□□ -0.98
CTNS-201ENST00000046640 CD164L2Q6UWJ8 174 aa8.94□□□□□ -0.98
CTNS-201ENST00000046640 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
CTNS-201ENST00000046640 Q8IZM0 81 aa8.94□□□□□ -0.98
CTNS-201ENST00000046640 CRYGAP11844 174 aa8.93□□□□□ -0.98
CTNS-201ENST00000046640 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
CTNS-201ENST00000046640 ATOX1O00244 68 aa8.92□□□□□ -0.98
CTNS-201ENST00000046640 C10orf25Q5T742 122 aa8.92□□□□□ -0.98
CTNS-201ENST00000046640 COL6A5A8TX70 2615 aa8.92□□□□□ -0.98
CTNS-201ENST00000046640 NANOS2P60321 138 aaKnown RBP8.91□□□□□ -0.98
CTNS-201ENST00000046640 UNQ6190/PRO20217Q6UXQ8 127 aa8.91□□□□□ -0.98
CTNS-201ENST00000046640 Q8NDZ9 215 aa8.91□□□□□ -0.98
CTNS-201ENST00000046640 ANK2Q01484 3957 aa8.91□□□□□ -0.98
CTNS-201ENST00000046640 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
CTNS-201ENST00000046640 C5orf47Q569G3 176 aa8.9□□□□□ -0.98
CTNS-201ENST00000046640 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.99
CTNS-201ENST00000046640 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.99
CTNS-201ENST00000046640 Q8N814 137 aa8.9□□□□□ -0.99
CTNS-201ENST00000046640 KRTAP24-1Q3LI83 254 aa8.89□□□□□ -0.99
CTNS-201ENST00000046640 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
CTNS-201ENST00000046640 LELP1Q5T871 98 aa8.89□□□□□ -0.99
CTNS-201ENST00000046640 Q6ZTC4 211 aa8.89□□□□□ -0.99
CTNS-201ENST00000046640 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
CTNS-201ENST00000046640 PRB2P02812 416 aaPredicted RBP8.88□□□□□ -0.99
CTNS-201ENST00000046640 SPAG11BQ08648 103 aa8.88□□□□□ -0.99
CTNS-201ENST00000046640 WFDC10BQ8IUB3 73 aa8.88□□□□□ -0.99
CTNS-201ENST00000046640 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
CTNS-201ENST00000046640 ENHOQ6UWT2 76 aa8.88□□□□□ -0.99
CTNS-201ENST00000046640 TRAV23DV6A0A075B6W5 121 aa8.87□□□□□ -0.99
CTNS-201ENST00000046640 Q6JHZ5 121 aa8.87□□□□□ -0.99
CTNS-201ENST00000046640 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
CTNS-201ENST00000046640 CCKP06307 115 aa8.87□□□□□ -0.99
CTNS-201ENST00000046640 FAM19A1Q7Z5A9 133 aa8.87□□□□□ -0.99
CTNS-201ENST00000046640 CYSRT1A8MQ03 144 aa8.87□□□□□ -0.99
CTNS-201ENST00000046640 KPRPQ5T749 579 aaPredicted RBP8.87□□□□□ -0.99
CTNS-201ENST00000046640 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
CTNS-201ENST00000046640 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
CTNS-201ENST00000046640 HIGD2BQ4VC39 106 aa8.85□□□□□ -0.99
CTNS-201ENST00000046640 DPH3Q96FX2 82 aa8.85□□□□□ -0.99
CTNS-201ENST00000046640 DSCR8Q96T75 97 aa8.85□□□□□ -0.99
CTNS-201ENST00000046640 LAMTOR3Q9UHA4 124 aa8.85□□□□□ -0.99
CTNS-201ENST00000046640 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
CTNS-201ENST00000046640 NBEAL1Q6ZS30 2694 aa8.84□□□□□ -0.99
CTNS-201ENST00000046640 A0A0J9YWU9 116 aa8.83□□□□□ -1
CTNS-201ENST00000046640 TMEM256-PLSCR3K7ERE1 68 aa8.83□□□□□ -1
CTNS-201ENST00000046640 UPK3BQ9BT76 320 aa8.83□□□□□ -1
CTNS-201ENST00000046640 M0R2N4 97 aa8.83□□□□□ -1
CTNS-201ENST00000046640 WIPF1O43516 503 aa8.83□□□□□ -1
CTNS-201ENST00000046640 OXTP01178 125 aa8.83□□□□□ -1
CTNS-201ENST00000046640 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
CTNS-201ENST00000046640 TMEM258P61165 79 aa8.82□□□□□ -1
CTNS-201ENST00000046640 PRR34Q9NV39 138 aa8.82□□□□□ -1
CTNS-201ENST00000046640 GHRHP01286 108 aa8.81□□□□□ -1
CTNS-201ENST00000046640 ESRGQ1W209 222 aa8.8□□□□□ -1
CTNS-201ENST00000046640 COX17Q14061 63 aa8.8□□□□□ -1
CTNS-201ENST00000046640 HAMPP81172 84 aa8.79□□□□□ -1
CTNS-201ENST00000046640 LINC00575Q6W349 94 aa8.79□□□□□ -1
CTNS-201ENST00000046640 MRAPQ8TCY5 172 aa8.79□□□□□ -1
CTNS-201ENST00000046640 UBL5Q9BZL1 73 aa8.79□□□□□ -1
CTNS-201ENST00000046640 NDUFC2O95298 119 aa8.78□□□□□ -1
CTNS-201ENST00000046640 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
CTNS-201ENST00000046640 C4orf26Q17RF5 130 aa8.78□□□□□ -1
CTNS-201ENST00000046640 Q6ZQY7 126 aa8.78□□□□□ -1
CTNS-201ENST00000046640 LINC00167Q96N53 147 aa8.78□□□□□ -1
CTNS-201ENST00000046640 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
CTNS-201ENST00000046640 MGAM2Q2M2H8 2515 aa8.78□□□□□ -1
CTNS-201ENST00000046640 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
CTNS-201ENST00000046640 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1.01
CTNS-201ENST00000046640 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
CTNS-201ENST00000046640 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
CTNS-201ENST00000046640 CAMK2N2Q96S95 79 aa8.76□□□□□ -1.01
CTNS-201ENST00000046640 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
CTNS-201ENST00000046640 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
CTNS-201ENST00000046640 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
CTNS-201ENST00000046640 HRCT1Q6UXD1 115 aa8.75□□□□□ -1.01
CTNS-201ENST00000046640 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
CTNS-201ENST00000046640 BAHCC1Q9P281 2608 aa8.73□□□□□ -1.01
CTNS-201ENST00000046640 Q6ZQT0 140 aa8.73□□□□□ -1.01
CTNS-201ENST00000046640 Q6ZRU5 148 aa8.73□□□□□ -1.01
CTNS-201ENST00000046640 Q5XG85 94 aa8.72□□□□□ -1.01
CTNS-201ENST00000046640 CMYA5Q8N3K9 4069 aa8.71□□□□□ -1.01
CTNS-201ENST00000046640 C1orf43Q9BWL3 253 aa8.71□□□□□ -1.02
CTNS-201ENST00000046640 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
CTNS-201ENST00000046640 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
CTNS-201ENST00000046640 TRAV10A0A0B4J240 114 aa8.69□□□□□ -1.02
CTNS-201ENST00000046640 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
CTNS-201ENST00000046640 Q6ZVQ6 151 aa8.69□□□□□ -1.02
CTNS-201ENST00000046640 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
CTNS-201ENST00000046640 H3BNG1 76 aa8.68□□□□□ -1.02
CTNS-201ENST00000046640 DIRC1Q969H9 104 aa8.68□□□□□ -1.02
CTNS-201ENST00000046640 SNURFQ9Y675 71 aa8.68□□□□□ -1.02
CTNS-201ENST00000046640 ATP5EP2Q5VTU8 51 aa8.67□□□□□ -1.02
CTNS-201ENST00000046640 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
CTNS-201ENST00000046640 GVQW2A0A096LPI5 108 aaPredicted RBP8.66□□□□□ -1.02
CTNS-201ENST00000046640 COX7BP24311 80 aa8.65□□□□□ -1.02
CTNS-201ENST00000046640 Q6ZRP5 223 aa8.65□□□□□ -1.02
CTNS-201ENST00000046640 CASC10Q5T4H9 136 aa8.65□□□□□ -1.03
CTNS-201ENST00000046640 MUC7Q8TAX7 377 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms