RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 COX17Q14061 63 aa11.83□□□□□ -0.52
SCARB2-210ENST00000638567 ZNF292O60281 2723 aa11.83□□□□□ -0.52
SCARB2-210ENST00000638567 Q6JHZ5 121 aa11.83□□□□□ -0.52
SCARB2-210ENST00000638567 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
SCARB2-210ENST00000638567 MP68P56378 58 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 LY6G6DO95868 133 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-210ENST00000638567 FAM236DA0A1B0GTK5 79 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 M0QXV9 152 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 NDUFS5O43920 106 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 FAM236CP0DP71 79 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 LINC00337Q8N6G1 96 aa11.82□□□□□ -0.52
SCARB2-210ENST00000638567 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
SCARB2-210ENST00000638567 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
SCARB2-210ENST00000638567 C3orf84H3BNL1 204 aa11.81□□□□□ -0.52
SCARB2-210ENST00000638567 SMR3AQ99954 134 aa11.81□□□□□ -0.52
SCARB2-210ENST00000638567 HECTD1Q9ULT8 2610 aa11.81□□□□□ -0.52
SCARB2-210ENST00000638567 VCANP13611 3396 aa11.8□□□□□ -0.52
SCARB2-210ENST00000638567 Q8N2B8 174 aa11.8□□□□□ -0.52
SCARB2-210ENST00000638567 NTM-AS1Q6ZSK4 140 aa11.8□□□□□ -0.52
SCARB2-210ENST00000638567 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-210ENST00000638567 UBE2AP49459 152 aa11.79□□□□□ -0.52
SCARB2-210ENST00000638567 ZNF73O43830 326 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-210ENST00000638567 Q8N814 137 aa11.79□□□□□ -0.52
SCARB2-210ENST00000638567 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
SCARB2-210ENST00000638567 SNURFQ9Y675 71 aa11.77□□□□□ -0.53
SCARB2-210ENST00000638567 CELSR3Q9NYQ7 3312 aa11.77□□□□□ -0.53
SCARB2-210ENST00000638567 M0R378 163 aa11.77□□□□□ -0.53
SCARB2-210ENST00000638567 NDUFB1O75438 58 aa11.76□□□□□ -0.53
SCARB2-210ENST00000638567 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-210ENST00000638567 A0A096LNI7 61 aa11.75□□□□□ -0.53
SCARB2-210ENST00000638567 NDUFC2O95298 119 aa11.75□□□□□ -0.53
SCARB2-210ENST00000638567 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
SCARB2-210ENST00000638567 DNAH14Q0VDD8 3507 aa11.74□□□□□ -0.53
SCARB2-210ENST00000638567 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
SCARB2-210ENST00000638567 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
SCARB2-210ENST00000638567 KLK5Q9Y337 293 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-210ENST00000638567 SOSTDC1Q6X4U4 206 aa11.73□□□□□ -0.53
SCARB2-210ENST00000638567 LINC00846Q9NV44 126 aa11.73□□□□□ -0.53
SCARB2-210ENST00000638567 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-210ENST00000638567 A0A1B0GUV1 79 aa11.72□□□□□ -0.53
SCARB2-210ENST00000638567 OXLD1Q5BKU9 147 aa11.72□□□□□ -0.53
SCARB2-210ENST00000638567 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
SCARB2-210ENST00000638567 MUC7Q8TAX7 377 aa11.72□□□□□ -0.53
SCARB2-210ENST00000638567 C6orf223Q8N319 242 aa11.72□□□□□ -0.53
SCARB2-210ENST00000638567 IGLV5-45A0A087WSX0 123 aa11.71□□□□□ -0.53
SCARB2-210ENST00000638567 C5orf47Q569G3 176 aa11.71□□□□□ -0.53
SCARB2-210ENST00000638567 FAM19A1Q7Z5A9 133 aa11.71□□□□□ -0.53
SCARB2-210ENST00000638567 A8MTW9 85 aa11.7□□□□□ -0.54
SCARB2-210ENST00000638567 H0Y9J4 135 aa11.7□□□□□ -0.54
SCARB2-210ENST00000638567 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-210ENST00000638567 RPL37AP8A6NKH3 93 aa11.7□□□□□ -0.54
SCARB2-210ENST00000638567 DSPP15924 2871 aaKnown RBP11.69□□□□□ -0.54
SCARB2-210ENST00000638567 PKIGQ9Y2B9 76 aa11.69□□□□□ -0.54
SCARB2-210ENST00000638567 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
SCARB2-210ENST00000638567 TRBV7-7A0A0K0K1E9 115 aa11.68□□□□□ -0.54
SCARB2-210ENST00000638567 BRK1Q8WUW1 75 aa11.68□□□□□ -0.54
SCARB2-210ENST00000638567 SHISA2Q6UWI4 295 aa11.68□□□□□ -0.54
SCARB2-210ENST00000638567 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
SCARB2-210ENST00000638567 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
SCARB2-210ENST00000638567 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-210ENST00000638567 C16orf95Q9H693 158 aa11.67□□□□□ -0.54
SCARB2-210ENST00000638567 EGFEM1PQ0D2K5 195 aa11.66□□□□□ -0.54
SCARB2-210ENST00000638567 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
SCARB2-210ENST00000638567 RETNQ9HD89 108 aa11.66□□□□□ -0.54
SCARB2-210ENST00000638567 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
SCARB2-210ENST00000638567 LITAFQ99732 161 aa11.65□□□□□ -0.54
SCARB2-210ENST00000638567 F8P00451 2351 aa11.64□□□□□ -0.55
SCARB2-210ENST00000638567 DHRS4-AS1Q9P1J3 65 aa11.63□□□□□ -0.55
SCARB2-210ENST00000638567 TRAV10A0A0B4J240 114 aa11.63□□□□□ -0.55
SCARB2-210ENST00000638567 B9D2Q9BPU9 175 aa11.62□□□□□ -0.55
SCARB2-210ENST00000638567 A0A0J9YWU9 116 aa11.62□□□□□ -0.55
SCARB2-210ENST00000638567 LINC00575Q6W349 94 aa11.61□□□□□ -0.55
SCARB2-210ENST00000638567 Q6ZTC4 211 aa11.61□□□□□ -0.55
SCARB2-210ENST00000638567 TRAV7A0A075B6U4 112 aa11.61□□□□□ -0.55
SCARB2-210ENST00000638567 NDUFC1O43677 76 aa11.61□□□□□ -0.55
SCARB2-210ENST00000638567 WFDC10BQ8IUB3 73 aa11.61□□□□□ -0.55
SCARB2-210ENST00000638567 FHL3Q13643 280 aa11.6□□□□□ -0.55
SCARB2-210ENST00000638567 C14orf177Q52M58 125 aa11.6□□□□□ -0.55
SCARB2-210ENST00000638567 Q8N3U1 123 aa11.6□□□□□ -0.55
SCARB2-210ENST00000638567 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
SCARB2-210ENST00000638567 EIF4EBP3O60516 100 aaPredicted RBP11.59□□□□□ -0.55
SCARB2-210ENST00000638567 WFDC13Q8IUB5 93 aa11.59□□□□□ -0.55
SCARB2-210ENST00000638567 CELA1Q9UNI1 258 aa11.59□□□□□ -0.55
SCARB2-210ENST00000638567 NDUFC2-KCTD14E9PQ53 114 aa11.58□□□□□ -0.56
SCARB2-210ENST00000638567 AKAP13Q12802 2813 aa11.58□□□□□ -0.56
SCARB2-210ENST00000638567 CFAP46Q8IYW2 2715 aa11.58□□□□□ -0.56
SCARB2-210ENST00000638567 FLNAP21333 2647 aaKnown RBP11.58□□□□□ -0.56
SCARB2-210ENST00000638567 LINC01561Q8N1V8 128 aa11.57□□□□□ -0.56
SCARB2-210ENST00000638567 FRYQ5TBA9 3013 aa11.57□□□□□ -0.56
SCARB2-210ENST00000638567 PRR4Q16378 134 aa11.57□□□□□ -0.56
SCARB2-210ENST00000638567 Q6ZVQ6 151 aa11.57□□□□□ -0.56
SCARB2-210ENST00000638567 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
SCARB2-210ENST00000638567 NBEAQ8NFP9 2946 aa11.56□□□□□ -0.56
SCARB2-210ENST00000638567 SPEGQ15772 3267 aa11.55□□□□□ -0.56
SCARB2-210ENST00000638567 LOC107984640A0A0U1RRK4 108 aa11.55□□□□□ -0.56
SCARB2-210ENST00000638567 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
SCARB2-210ENST00000638567 HRCT1Q6UXD1 115 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms