RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
UBE3A-227ENST00000638011 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
UBE3A-227ENST00000638011 CD164Q04900 197 aa11.05□□□□□ -0.64
UBE3A-227ENST00000638011 C1orf64Q8NEQ6 169 aa11.05□□□□□ -0.64
UBE3A-227ENST00000638011 CDIP1Q9H305 208 aa11.05□□□□□ -0.64
UBE3A-227ENST00000638011 A0A087WVE0 104 aa11.05□□□□□ -0.64
UBE3A-227ENST00000638011 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
UBE3A-227ENST00000638011 Q6ZTC4 211 aa11.04□□□□□ -0.64
UBE3A-227ENST00000638011 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
UBE3A-227ENST00000638011 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
UBE3A-227ENST00000638011 A0A087WYN8 130 aa11.03□□□□□ -0.64
UBE3A-227ENST00000638011 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.64
UBE3A-227ENST00000638011 SMIM1B2RUZ4 78 aa11.02□□□□□ -0.64
UBE3A-227ENST00000638011 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
UBE3A-227ENST00000638011 DEFB4AO15263 64 aa11.02□□□□□ -0.65
UBE3A-227ENST00000638011 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
UBE3A-227ENST00000638011 ERC2-IT1O76042 136 aa11.01□□□□□ -0.65
UBE3A-227ENST00000638011 SPRNQ5BIV9 151 aa11.01□□□□□ -0.65
UBE3A-227ENST00000638011 CYSRT1A8MQ03 144 aa11.01□□□□□ -0.65
UBE3A-227ENST00000638011 ZNF843Q8N446 348 aa11.01□□□□□ -0.65
UBE3A-227ENST00000638011 AMELXQ99217 191 aa11.01□□□□□ -0.65
UBE3A-227ENST00000638011 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
UBE3A-227ENST00000638011 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
UBE3A-227ENST00000638011 IGHV6-1A0A0B4J1U7 121 aa11□□□□□ -0.65
UBE3A-227ENST00000638011 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
UBE3A-227ENST00000638011 LINC00846Q9NV44 126 aa11□□□□□ -0.65
UBE3A-227ENST00000638011 J3QKU1 62 aa11□□□□□ -0.65
UBE3A-227ENST00000638011 DEFB1P60022 68 aa11□□□□□ -0.65
UBE3A-227ENST00000638011 A0A1B0GUV1 79 aa10.99□□□□□ -0.65
UBE3A-227ENST00000638011 C4orf26Q17RF5 130 aa10.99□□□□□ -0.65
UBE3A-227ENST00000638011 LINC00242Q5T6M2 205 aa10.99□□□□□ -0.65
UBE3A-227ENST00000638011 DNAJC9-AS1A6NH13 148 aa10.98□□□□□ -0.65
UBE3A-227ENST00000638011 PIP4P1Q86T03 277 aa10.98□□□□□ -0.65
UBE3A-227ENST00000638011 KPRPQ5T749 579 aaPredicted RBP10.97□□□□□ -0.65
UBE3A-227ENST00000638011 MUC22E2RYF6 1773 aaPredicted RBP10.97□□□□□ -0.65
UBE3A-227ENST00000638011 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
UBE3A-227ENST00000638011 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
UBE3A-227ENST00000638011 PSMG3-AS1Q96PY0 264 aa10.97□□□□□ -0.65
UBE3A-227ENST00000638011 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
UBE3A-227ENST00000638011 COL4A6Q14031 1691 aa10.96□□□□□ -0.66
UBE3A-227ENST00000638011 NHLRC4P0CG21 123 aaPredicted RBP10.95□□□□□ -0.66
UBE3A-227ENST00000638011 C2orf48Q96LS8 159 aa10.95□□□□□ -0.66
UBE3A-227ENST00000638011 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
UBE3A-227ENST00000638011 C6orf48Q9UBA6 75 aa10.95□□□□□ -0.66
UBE3A-227ENST00000638011 Q9BRP9 147 aa10.94□□□□□ -0.66
UBE3A-227ENST00000638011 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
UBE3A-227ENST00000638011 Q8N2B8 174 aa10.94□□□□□ -0.66
UBE3A-227ENST00000638011 LINC00310P59036 64 aa10.94□□□□□ -0.66
UBE3A-227ENST00000638011 Q6YL49 198 aa10.93□□□□□ -0.66
UBE3A-227ENST00000638011 X6R8D5 127 aa10.92□□□□□ -0.66
UBE3A-227ENST00000638011 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
UBE3A-227ENST00000638011 LINC01546A6NGU7 62 aa10.92□□□□□ -0.66
UBE3A-227ENST00000638011 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
UBE3A-227ENST00000638011 COL4A4P53420 1690 aaPredicted RBP10.92□□□□□ -0.66
UBE3A-227ENST00000638011 LOC110117498A0A087WWA1 95 aa10.91□□□□□ -0.66
UBE3A-227ENST00000638011 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
UBE3A-227ENST00000638011 TRAV22A0A0B4J277 110 aa10.9□□□□□ -0.66
UBE3A-227ENST00000638011 CIRBP-AS1Q8TBR5 109 aa10.9□□□□□ -0.66
UBE3A-227ENST00000638011 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
UBE3A-227ENST00000638011 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
UBE3A-227ENST00000638011 A0A087WSZ3 146 aa10.88□□□□□ -0.67
UBE3A-227ENST00000638011 OXLD1Q5BKU9 147 aa10.88□□□□□ -0.67
UBE3A-227ENST00000638011 KTN1-AS1Q86SY8 53 aa10.88□□□□□ -0.67
UBE3A-227ENST00000638011 PLA2G2AP14555 144 aa10.86□□□□□ -0.67
UBE3A-227ENST00000638011 GRNP28799 593 aaKnown RBP10.86□□□□□ -0.67
UBE3A-227ENST00000638011 LINC00482Q8N8I6 264 aa10.86□□□□□ -0.67
UBE3A-227ENST00000638011 SBSPONQ8IVN8 264 aa10.86□□□□□ -0.67
UBE3A-227ENST00000638011 PROK1P58294 105 aa10.85□□□□□ -0.67
UBE3A-227ENST00000638011 LMO4P61968 165 aa10.84□□□□□ -0.67
UBE3A-227ENST00000638011 UNQ6190/PRO20217Q6UXQ8 127 aa10.84□□□□□ -0.67
UBE3A-227ENST00000638011 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
UBE3A-227ENST00000638011 SPINK1P00995 79 aa10.84□□□□□ -0.67
UBE3A-227ENST00000638011 Q6ZPA2 131 aa10.84□□□□□ -0.67
UBE3A-227ENST00000638011 C11orf72Q8NBR9 251 aa10.83□□□□□ -0.68
UBE3A-227ENST00000638011 UQCR11O14957 56 aa10.83□□□□□ -0.68
UBE3A-227ENST00000638011 Q6ZSV7 163 aa10.83□□□□□ -0.68
UBE3A-227ENST00000638011 SMIM29Q86T20 159 aa10.83□□□□□ -0.68
UBE3A-227ENST00000638011 ELOF1P60002 83 aaKnown RBP10.82□□□□□ -0.68
UBE3A-227ENST00000638011 HECTD1Q9ULT8 2610 aa10.82□□□□□ -0.68
UBE3A-227ENST00000638011 IGLV2-18A0A075B6J9 118 aa10.82□□□□□ -0.68
UBE3A-227ENST00000638011 MSMPQ1L6U9 139 aa10.82□□□□□ -0.68
UBE3A-227ENST00000638011 PRR9Q5T870 116 aa10.82□□□□□ -0.68
UBE3A-227ENST00000638011 LINC00337Q8N6G1 96 aa10.82□□□□□ -0.68
UBE3A-227ENST00000638011 URB1-AS1Q96HZ7 61 aa10.81□□□□□ -0.68
UBE3A-227ENST00000638011 PRLHP81277 87 aa10.81□□□□□ -0.68
UBE3A-227ENST00000638011 BRI3O95415 125 aa10.81□□□□□ -0.68
UBE3A-227ENST00000638011 ADORA2A-AS1P86434 159 aa10.81□□□□□ -0.68
UBE3A-227ENST00000638011 C11orf21Q9P2W6 132 aa10.81□□□□□ -0.68
UBE3A-227ENST00000638011 IGLV1-40P01703 118 aa10.8□□□□□ -0.68
UBE3A-227ENST00000638011 COX6A2Q02221 97 aa10.79□□□□□ -0.68
UBE3A-227ENST00000638011 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
UBE3A-227ENST00000638011 LOC101927531A0A1B0GV80 90 aa10.79□□□□□ -0.68
UBE3A-227ENST00000638011 NUPR2A6NF83 97 aa10.78□□□□□ -0.68
UBE3A-227ENST00000638011 MOBPQ13875 183 aa10.78□□□□□ -0.68
UBE3A-227ENST00000638011 CRIPTQ9P021 101 aa10.78□□□□□ -0.68
UBE3A-227ENST00000638011 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.68
UBE3A-227ENST00000638011 KLKP1Q107X0 134 aa10.77□□□□□ -0.69
UBE3A-227ENST00000638011 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
UBE3A-227ENST00000638011 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
UBE3A-227ENST00000638011 SPATA3Q8NHX4 192 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms