RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
CLN6-213ENST00000636212 TOMM6Q96B49 74 aa11.7□□□□□ -0.54
CLN6-213ENST00000636212 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
CLN6-213ENST00000636212 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
CLN6-213ENST00000636212 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
CLN6-213ENST00000636212 SCGB3A1Q96QR1 104 aa11.69□□□□□ -0.54
CLN6-213ENST00000636212 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
CLN6-213ENST00000636212 FABP9Q0Z7S8 132 aa11.68□□□□□ -0.54
CLN6-213ENST00000636212 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
CLN6-213ENST00000636212 ERASQ7Z444 233 aa11.67□□□□□ -0.54
CLN6-213ENST00000636212 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
CLN6-213ENST00000636212 Q8IZM0 81 aa11.67□□□□□ -0.54
CLN6-213ENST00000636212 FAM168BA1KXE4 195 aa11.66□□□□□ -0.54
CLN6-213ENST00000636212 UBE2BP63146 152 aa11.66□□□□□ -0.54
CLN6-213ENST00000636212 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
CLN6-213ENST00000636212 M0QXV9 152 aa11.65□□□□□ -0.54
CLN6-213ENST00000636212 FA2HQ7L5A8 372 aa11.64□□□□□ -0.55
CLN6-213ENST00000636212 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
CLN6-213ENST00000636212 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
CLN6-213ENST00000636212 CXCL5P42830 114 aa11.63□□□□□ -0.55
CLN6-213ENST00000636212 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
CLN6-213ENST00000636212 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
CLN6-213ENST00000636212 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
CLN6-213ENST00000636212 LINC01546A6NGU7 62 aa11.61□□□□□ -0.55
CLN6-213ENST00000636212 F8VRH5 84 aa11.61□□□□□ -0.55
CLN6-213ENST00000636212 HMCN2Q8NDA2 5059 aa11.6□□□□□ -0.55
CLN6-213ENST00000636212 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
CLN6-213ENST00000636212 TINCRA0A1B0GVN0 87 aa11.59□□□□□ -0.55
CLN6-213ENST00000636212 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
CLN6-213ENST00000636212 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
CLN6-213ENST00000636212 PMVKQ15126 192 aa11.57□□□□□ -0.56
CLN6-213ENST00000636212 COX7B2Q8TF08 81 aa11.57□□□□□ -0.56
CLN6-213ENST00000636212 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
CLN6-213ENST00000636212 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
CLN6-213ENST00000636212 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
CLN6-213ENST00000636212 CST9LQ9H4G1 147 aa11.56□□□□□ -0.56
CLN6-213ENST00000636212 H0Y9J4 135 aa11.55□□□□□ -0.56
CLN6-213ENST00000636212 H3BRM9 83 aa11.55□□□□□ -0.56
CLN6-213ENST00000636212 XAGE1AQ9HD64 81 aa11.55□□□□□ -0.56
CLN6-213ENST00000636212 IGLV5-45A0A087WSX0 123 aa11.54□□□□□ -0.56
CLN6-213ENST00000636212 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
CLN6-213ENST00000636212 RAB5BP61020 215 aa11.53□□□□□ -0.56
CLN6-213ENST00000636212 C22orf24Q9Y442 160 aa11.53□□□□□ -0.56
CLN6-213ENST00000636212 NUPR1O60356 82 aa11.52□□□□□ -0.57
CLN6-213ENST00000636212 NDUFA6P56556 154 aa11.52□□□□□ -0.57
CLN6-213ENST00000636212 URB1-AS1Q96HZ7 61 aa11.52□□□□□ -0.57
CLN6-213ENST00000636212 COLCA2A8K830 154 aa11.51□□□□□ -0.57
CLN6-213ENST00000636212 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
CLN6-213ENST00000636212 ODF1Q14990 250 aa11.51□□□□□ -0.57
CLN6-213ENST00000636212 LINC00614P0C842 121 aa11.5□□□□□ -0.57
CLN6-213ENST00000636212 TP73-AS1Q9UF72 201 aa11.5□□□□□ -0.57
CLN6-213ENST00000636212 HBDP02042 147 aa11.49□□□□□ -0.57
CLN6-213ENST00000636212 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
CLN6-213ENST00000636212 A0A096LNJ9 63 aa11.48□□□□□ -0.57
CLN6-213ENST00000636212 SCO1O75880 301 aa11.48□□□□□ -0.57
CLN6-213ENST00000636212 ATP5LO75964 103 aa11.48□□□□□ -0.57
CLN6-213ENST00000636212 TRGC2P03986 189 aa11.48□□□□□ -0.57
CLN6-213ENST00000636212 MRPL55Q7Z7F7 128 aaKnown RBP11.48□□□□□ -0.57
CLN6-213ENST00000636212 PRR26Q8N8Z3 221 aa11.48□□□□□ -0.57
CLN6-213ENST00000636212 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
CLN6-213ENST00000636212 TNXBP22105 4242 aa11.46□□□□□ -0.57
CLN6-213ENST00000636212 ZNF861PO60384 105 aa11.46□□□□□ -0.57
CLN6-213ENST00000636212 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
CLN6-213ENST00000636212 RPL13AP40429 203 aaKnown RBP11.44□□□□□ -0.58
CLN6-213ENST00000636212 NKAPP1Q8N9T2 125 aa11.44□□□□□ -0.58
CLN6-213ENST00000636212 UBR4Q5T4S7 5183 aa11.43□□□□□ -0.58
CLN6-213ENST00000636212 S100A1P23297 94 aa11.43□□□□□ -0.58
CLN6-213ENST00000636212 BAGE3Q86Y29 109 aa11.43□□□□□ -0.58
CLN6-213ENST00000636212 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
CLN6-213ENST00000636212 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
CLN6-213ENST00000636212 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
CLN6-213ENST00000636212 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
CLN6-213ENST00000636212 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
CLN6-213ENST00000636212 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
CLN6-213ENST00000636212 RPL37AP8A6NKH3 93 aa11.4□□□□□ -0.58
CLN6-213ENST00000636212 BCE1O60756 84 aa11.4□□□□□ -0.58
CLN6-213ENST00000636212 HSBP1O75506 76 aa11.4□□□□□ -0.58
CLN6-213ENST00000636212 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
CLN6-213ENST00000636212 PFN2P35080 140 aa11.4□□□□□ -0.58
CLN6-213ENST00000636212 TMEM170BQ5T4T1 132 aa11.39□□□□□ -0.59
CLN6-213ENST00000636212 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
CLN6-213ENST00000636212 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
CLN6-213ENST00000636212 GAGE10A6NGK3 116 aa11.38□□□□□ -0.59
CLN6-213ENST00000636212 SERF1AO75920 110 aa11.38□□□□□ -0.59
CLN6-213ENST00000636212 COX17Q14061 63 aa11.37□□□□□ -0.59
CLN6-213ENST00000636212 ERG28Q9UKR5 140 aa11.37□□□□□ -0.59
CLN6-213ENST00000636212 LINC00310P59036 64 aa11.36□□□□□ -0.59
CLN6-213ENST00000636212 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
CLN6-213ENST00000636212 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
CLN6-213ENST00000636212 UBE2AP49459 152 aa11.35□□□□□ -0.59
CLN6-213ENST00000636212 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
CLN6-213ENST00000636212 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
CLN6-213ENST00000636212 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms