RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 C6orf48Q9UBA6 75 aa10.77□□□□□ -0.69
LIN28B-202ENST00000635857 VPS13BQ7Z7G8 4022 aa10.76□□□□□ -0.69
LIN28B-202ENST00000635857 PDZD11Q5EBL8 140 aa10.76□□□□□ -0.69
LIN28B-202ENST00000635857 C10orf25Q5T742 122 aa10.76□□□□□ -0.69
LIN28B-202ENST00000635857 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
LIN28B-202ENST00000635857 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
LIN28B-202ENST00000635857 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
LIN28B-202ENST00000635857 SRRM2Q9UQ35 2752 aaKnown RBP10.74□□□□□ -0.69
LIN28B-202ENST00000635857 NDUFC2-KCTD14E9PQ53 114 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 F8VRH5 84 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 IGLC3P0DOY3 106 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 GAGE2EQ4V326 116 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 GAGE2DQ9UEU5 116 aa10.73□□□□□ -0.69
LIN28B-202ENST00000635857 COLCA2A8K830 154 aa10.72□□□□□ -0.69
LIN28B-202ENST00000635857 IFI27L1Q96BM0 104 aa10.72□□□□□ -0.69
LIN28B-202ENST00000635857 C9orf116Q5BN46 136 aaPredicted RBP10.71□□□□□ -0.69
LIN28B-202ENST00000635857 Q6ZRP5 223 aa10.71□□□□□ -0.69
LIN28B-202ENST00000635857 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
LIN28B-202ENST00000635857 KRTAP10-4P60372 401 aaPredicted RBP10.69□□□□□ -0.7
LIN28B-202ENST00000635857 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
LIN28B-202ENST00000635857 SERF1AO75920 110 aa10.68□□□□□ -0.7
LIN28B-202ENST00000635857 ZNF22P17026 224 aaPredicted RBP10.68□□□□□ -0.7
LIN28B-202ENST00000635857 FAM19A2Q8N3H0 131 aa10.68□□□□□ -0.7
LIN28B-202ENST00000635857 TRAV12-1A0A0B4J245 112 aa10.67□□□□□ -0.7
LIN28B-202ENST00000635857 A0A1W2PNN7 141 aa10.67□□□□□ -0.7
LIN28B-202ENST00000635857 SCO1O75880 301 aa10.67□□□□□ -0.7
LIN28B-202ENST00000635857 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
LIN28B-202ENST00000635857 FAM19A5Q7Z5A7 132 aaPredicted RBP10.67□□□□□ -0.7
LIN28B-202ENST00000635857 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
LIN28B-202ENST00000635857 J3QL48 77 aa10.66□□□□□ -0.7
LIN28B-202ENST00000635857 H0Y8G0 127 aa10.65□□□□□ -0.7
LIN28B-202ENST00000635857 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
LIN28B-202ENST00000635857 HSPB8Q9UJY1 196 aa10.65□□□□□ -0.7
LIN28B-202ENST00000635857 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
LIN28B-202ENST00000635857 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
LIN28B-202ENST00000635857 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
LIN28B-202ENST00000635857 FAM168BA1KXE4 195 aa10.62□□□□□ -0.71
LIN28B-202ENST00000635857 M0QXV9 152 aa10.62□□□□□ -0.71
LIN28B-202ENST00000635857 PHF5AQ7RTV0 110 aaKnown RBP10.62□□□□□ -0.71
LIN28B-202ENST00000635857 FABP4P15090 132 aa10.61□□□□□ -0.71
LIN28B-202ENST00000635857 UBE2BP63146 152 aa10.61□□□□□ -0.71
LIN28B-202ENST00000635857 OXTP01178 125 aa10.6□□□□□ -0.71
LIN28B-202ENST00000635857 HNRNPA3P51991 378 aaKnown RBP10.6□□□□□ -0.71
LIN28B-202ENST00000635857 LINC00310P59036 64 aa10.6□□□□□ -0.71
LIN28B-202ENST00000635857 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
LIN28B-202ENST00000635857 XAGE1AQ9HD64 81 aa10.6□□□□□ -0.71
LIN28B-202ENST00000635857 KRTAP29-1A8MX34 341 aaPredicted RBP10.59□□□□□ -0.71
LIN28B-202ENST00000635857 HIST1H2BKO60814 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BJP06899 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BOP23527 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BBP33778 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BDP58876 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BCP62807 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST2H2BEQ16778 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BHQ93079 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BNQ99877 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 HIST1H2BMQ99879 126 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 MAP1LC3CQ9BXW4 147 aa10.58□□□□□ -0.72
LIN28B-202ENST00000635857 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 PLNP26678 52 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 PFN2P35080 140 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 ODF1Q14990 250 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 PSORS1C2Q9UIG4 136 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 MYCBP2O75592 4640 aa10.57□□□□□ -0.72
LIN28B-202ENST00000635857 NUPR1O60356 82 aa10.56□□□□□ -0.72
LIN28B-202ENST00000635857 S100A1P23297 94 aa10.56□□□□□ -0.72
LIN28B-202ENST00000635857 LBHQ53QV2 105 aaPredicted RBP10.56□□□□□ -0.72
LIN28B-202ENST00000635857 ERG28Q9UKR5 140 aa10.56□□□□□ -0.72
LIN28B-202ENST00000635857 COX17Q14061 63 aa10.55□□□□□ -0.72
LIN28B-202ENST00000635857 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
LIN28B-202ENST00000635857 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
LIN28B-202ENST00000635857 DPM2O94777 84 aa10.54□□□□□ -0.72
LIN28B-202ENST00000635857 HERVK_113P61574 105 aa10.54□□□□□ -0.72
LIN28B-202ENST00000635857 ATP6V1G1O75348 118 aa10.53□□□□□ -0.72
LIN28B-202ENST00000635857 SERTAD4-AS1Q5TG53 156 aa10.53□□□□□ -0.72
LIN28B-202ENST00000635857 NKAPP1Q8N9T2 125 aa10.53□□□□□ -0.72
LIN28B-202ENST00000635857 C22orf24Q9Y442 160 aa10.53□□□□□ -0.72
LIN28B-202ENST00000635857 DMBT1Q9UGM3 2413 aaPredicted RBP10.53□□□□□ -0.72
LIN28B-202ENST00000635857 REG3GQ6UW15 175 aa10.52□□□□□ -0.73
LIN28B-202ENST00000635857 TP73-AS1Q9UF72 201 aa10.52□□□□□ -0.73
LIN28B-202ENST00000635857 IGKCP01834 107 aa10.51□□□□□ -0.73
LIN28B-202ENST00000635857 LINC00158P58513 81 aa10.51□□□□□ -0.73
LIN28B-202ENST00000635857 MRPL55Q7Z7F7 128 aaKnown RBP10.51□□□□□ -0.73
LIN28B-202ENST00000635857 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
LIN28B-202ENST00000635857 PKHD1L1Q86WI1 4243 aa10.5□□□□□ -0.73
LIN28B-202ENST00000635857 LINC00587B1AMM8 73 aa10.5□□□□□ -0.73
LIN28B-202ENST00000635857 HERV-K104P63124 156 aa10.5□□□□□ -0.73
LIN28B-202ENST00000635857 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
LIN28B-202ENST00000635857 PLA2G2DQ9UNK4 145 aa10.5□□□□□ -0.73
LIN28B-202ENST00000635857 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
LIN28B-202ENST00000635857 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
LIN28B-202ENST00000635857 PMCHL2Q9BQD1 86 aa10.49□□□□□ -0.73
LIN28B-202ENST00000635857 IGLV7-43P04211 117 aa10.48□□□□□ -0.73
LIN28B-202ENST00000635857 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
LIN28B-202ENST00000635857 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
LIN28B-202ENST00000635857 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms