RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 PKD1L2Q7Z442 2459 aa6.31□□□□□ -1.4
PATJ-216ENST00000635214 CSPG4Q6UVK1 2322 aa6.31□□□□□ -1.4
PATJ-216ENST00000635214 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
PATJ-216ENST00000635214 C10orf25Q5T742 122 aa6.31□□□□□ -1.4
PATJ-216ENST00000635214 HIVEP2P31629 2446 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 INAFM1C9JVW0 142 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 VPREB1P12018 145 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 KRTAP10-9P60411 292 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 CDSNQ15517 529 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 H0Y9P7 68 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
PATJ-216ENST00000635214 SONP18583 2426 aaKnown RBP6.29□□□□□ -1.4
PATJ-216ENST00000635214 HILS1P60008 231 aa6.29□□□□□ -1.4
PATJ-216ENST00000635214 LOC100131303A0A0U1RQF7 123 aa6.29□□□□□ -1.4
PATJ-216ENST00000635214 UNQ6190/PRO20217Q6UXQ8 127 aa6.29□□□□□ -1.4
PATJ-216ENST00000635214 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 IGHV4-30-4P0DP06 118 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
PATJ-216ENST00000635214 LINC01561Q8N1V8 128 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 C4orf26Q17RF5 130 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 PRRC2AP48634 2157 aaKnown RBP6.28□□□□□ -1.4
PATJ-216ENST00000635214 RPL37AP8A6NKH3 93 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 COX6A2Q02221 97 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 PCSK5Q92824 1860 aa6.28□□□□□ -1.4
PATJ-216ENST00000635214 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 SBSPONQ8IVN8 264 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 C7orf33Q8WU49 177 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 PTPN13Q12923 2485 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 F8WDY8 70 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 MYO18BQ8IUG5 2567 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 KLK9Q2XQG4 91 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
PATJ-216ENST00000635214 C16orf95Q9H693 158 aa6.26□□□□□ -1.41
PATJ-216ENST00000635214 NAV3Q8IVL0 2385 aa6.26□□□□□ -1.41
PATJ-216ENST00000635214 CHD7Q9P2D1 2997 aa6.26□□□□□ -1.41
PATJ-216ENST00000635214 TRAV10A0A0B4J240 114 aa6.26□□□□□ -1.41
PATJ-216ENST00000635214 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
PATJ-216ENST00000635214 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
PATJ-216ENST00000635214 A0A1B0GW54 56 aa6.25□□□□□ -1.41
PATJ-216ENST00000635214 ZNF292O60281 2723 aa6.25□□□□□ -1.41
PATJ-216ENST00000635214 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.25□□□□□ -1.41
PATJ-216ENST00000635214 ANKRD11Q6UB99 2663 aaPredicted RBP6.25□□□□□ -1.41
PATJ-216ENST00000635214 LINC00337Q8N6G1 96 aa6.24□□□□□ -1.41
PATJ-216ENST00000635214 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
PATJ-216ENST00000635214 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
PATJ-216ENST00000635214 AGRNO00468 2067 aa6.24□□□□□ -1.41
PATJ-216ENST00000635214 DSCAMO60469 2012 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 NOTCH2Q04721 2471 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
PATJ-216ENST00000635214 C10orf99Q6UWK7 81 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 A0A087WSZ3 146 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 C1orf64Q8NEQ6 169 aa6.23□□□□□ -1.41
PATJ-216ENST00000635214 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
PATJ-216ENST00000635214 IGLV5-39A0A0G2JS06 123 aa6.22□□□□□ -1.41
PATJ-216ENST00000635214 H3BPC8 53 aa6.22□□□□□ -1.41
PATJ-216ENST00000635214 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
PATJ-216ENST00000635214 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 PRM2P04554 102 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 Q8N2B8 174 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 C2orf48Q96LS8 159 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 LINC01006Q8NI28 216 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 CEP295Q9C0D2 2601 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 EPG5Q9HCE0 2579 aa6.21□□□□□ -1.42
PATJ-216ENST00000635214 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
PATJ-216ENST00000635214 Q9BRP9 147 aa6.2□□□□□ -1.42
PATJ-216ENST00000635214 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
PATJ-216ENST00000635214 KIF25-AS1Q9Y6Z4 181 aa6.2□□□□□ -1.42
PATJ-216ENST00000635214 ZNF462Q96JM2 2506 aa6.2□□□□□ -1.42
PATJ-216ENST00000635214 ODF3L2Q3SX64 289 aa6.19□□□□□ -1.42
PATJ-216ENST00000635214 SMIM29Q86T20 159 aa6.19□□□□□ -1.42
PATJ-216ENST00000635214 A0A1B0GU69 56 aa6.18□□□□□ -1.42
PATJ-216ENST00000635214 FHL2Q14192 279 aa6.18□□□□□ -1.42
PATJ-216ENST00000635214 USP24Q9UPU5 2620 aa6.18□□□□□ -1.42
PATJ-216ENST00000635214 MYO9AB2RTY4 2548 aa6.18□□□□□ -1.42
PATJ-216ENST00000635214 A0A1W2PPR1 153 aa6.17□□□□□ -1.42
PATJ-216ENST00000635214 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
PATJ-216ENST00000635214 C6orf223Q8N319 242 aa6.17□□□□□ -1.42
PATJ-216ENST00000635214 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
PATJ-216ENST00000635214 IGLV1-51P01701 117 aa6.16□□□□□ -1.42
PATJ-216ENST00000635214 CHD8Q9HCK8 2581 aa6.16□□□□□ -1.42
PATJ-216ENST00000635214 RAI1Q7Z5J4 1906 aaPredicted RBP6.16□□□□□ -1.42
PATJ-216ENST00000635214 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
PATJ-216ENST00000635214 AVPP01185 164 aa6.16□□□□□ -1.42
PATJ-216ENST00000635214 ACYP2P14621 99 aa6.16□□□□□ -1.42
PATJ-216ENST00000635214 ERC2-IT1O76042 136 aa6.15□□□□□ -1.42
PATJ-216ENST00000635214 Q6ZTC4 211 aa6.15□□□□□ -1.42
PATJ-216ENST00000635214 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
PATJ-216ENST00000635214 TLN1Q9Y490 2541 aaKnown RBP6.14□□□□□ -1.43
PATJ-216ENST00000635214 Q6ZQT0 140 aa6.14□□□□□ -1.43
PATJ-216ENST00000635214 Q6ZSN1 163 aa6.14□□□□□ -1.43
PATJ-216ENST00000635214 FAM19A4Q96LR4 140 aa6.14□□□□□ -1.43
PATJ-216ENST00000635214 IGHV3OR16-9A0A0B4J2B5 98 aa6.14□□□□□ -1.43
PATJ-216ENST00000635214 C18orf65Q6ZTR6 163 aa6.14□□□□□ -1.43
PATJ-216ENST00000635214 A8MTW9 85 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms