RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 A0A096LNT2 108 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 COX6A2Q02221 97 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 FAM218AQ96MZ4 157 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 SERP1Q9Y6X1 66 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 TRGV2A0A075B6R0 118 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 F8WEM9 126 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 RNASE1P07998 156 aaKnown RBP7.66□□□□□ -1.18
CDH1-214ENST00000621016 ENHOQ6UWT2 76 aa7.66□□□□□ -1.18
CDH1-214ENST00000621016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.66□□□□□ -1.18
CDH1-214ENST00000621016 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
CDH1-214ENST00000621016 PRB2P02812 416 aaPredicted RBP7.65□□□□□ -1.18
CDH1-214ENST00000621016 DEFB113Q30KQ7 82 aa7.65□□□□□ -1.18
CDH1-214ENST00000621016 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
CDH1-214ENST00000621016 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
CDH1-214ENST00000621016 ODF3L2Q3SX64 289 aa7.65□□□□□ -1.18
CDH1-214ENST00000621016 UBE2D4Q9Y2X8 147 aa7.65□□□□□ -1.18
CDH1-214ENST00000621016 LOC100131303A0A0U1RQF7 123 aa7.65□□□□□ -1.19
CDH1-214ENST00000621016 NCR3O14931 201 aa7.65□□□□□ -1.19
CDH1-214ENST00000621016 Q9H8V8 135 aa7.65□□□□□ -1.19
CDH1-214ENST00000621016 IGHV1-58A0A0C4DH39 117 aa7.64□□□□□ -1.19
CDH1-214ENST00000621016 SLPIP03973 132 aa7.64□□□□□ -1.19
CDH1-214ENST00000621016 C11orf68Q9H3H3 251 aaKnown RBP7.64□□□□□ -1.19
CDH1-214ENST00000621016 UNC79Q9P2D8 2635 aa7.64□□□□□ -1.19
CDH1-214ENST00000621016 TRBV7-6A0A0J9YX20 115 aa7.64□□□□□ -1.19
CDH1-214ENST00000621016 NDUFC2O95298 119 aa7.64□□□□□ -1.19
CDH1-214ENST00000621016 FAM229BQ4G0N7 80 aa7.63□□□□□ -1.19
CDH1-214ENST00000621016 VSIG2Q96IQ7 327 aa7.63□□□□□ -1.19
CDH1-214ENST00000621016 CCL24O00175 119 aa7.63□□□□□ -1.19
CDH1-214ENST00000621016 H7BZZ5 65 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
CDH1-214ENST00000621016 A0A096LPF7 62 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 ZNF843Q8N446 348 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 C11orf72Q8NBR9 251 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 DNAJC9-AS1A6NH13 148 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 CCKP06307 115 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 DEFB130BP0DP73 79 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 DEFB130AP0DP74 79 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 C4orf3Q8WVX3 66 aa7.62□□□□□ -1.19
CDH1-214ENST00000621016 CR1P17927 2039 aa7.61□□□□□ -1.19
CDH1-214ENST00000621016 NDUFC2-KCTD14E9PQ53 114 aa7.61□□□□□ -1.19
CDH1-214ENST00000621016 UBE2L6O14933 153 aa7.61□□□□□ -1.19
CDH1-214ENST00000621016 ESM1Q9NQ30 184 aa7.61□□□□□ -1.19
CDH1-214ENST00000621016 TEP1Q99973 2627 aaKnown RBP7.6□□□□□ -1.19
CDH1-214ENST00000621016 PAX4O43316 350 aa7.6□□□□□ -1.19
CDH1-214ENST00000621016 INAFM2P0DMQ5 153 aa7.6□□□□□ -1.19
CDH1-214ENST00000621016 RPL36AP83881 106 aaKnown RBP7.6□□□□□ -1.19
CDH1-214ENST00000621016 C6orf226Q5I0X4 101 aa7.6□□□□□ -1.19
CDH1-214ENST00000621016 RPL36ALQ969Q0 106 aaKnown RBP7.6□□□□□ -1.19
CDH1-214ENST00000621016 LITAFQ99732 161 aa7.6□□□□□ -1.19
CDH1-214ENST00000621016 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
CDH1-214ENST00000621016 FLNBO75369 2602 aaKnown RBP7.6□□□□□ -1.19
CDH1-214ENST00000621016 PIK3CD-AS1Q5SR53 167 aa7.6□□□□□ -1.19
CDH1-214ENST00000621016 COX7A2LO14548 114 aa7.59□□□□□ -1.19
CDH1-214ENST00000621016 CLPSL2Q6UWE3 100 aa7.59□□□□□ -1.19
CDH1-214ENST00000621016 TRGV4A0A0C4DH28 118 aa7.59□□□□□ -1.19
CDH1-214ENST00000621016 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 TENM1Q9UKZ4 2725 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 MIAQ16674 131 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 SMR3AQ99954 134 aa7.58□□□□□ -1.2
CDH1-214ENST00000621016 DEFB4AO15263 64 aa7.57□□□□□ -1.2
CDH1-214ENST00000621016 LINC01600Q96MT4 127 aa7.57□□□□□ -1.2
CDH1-214ENST00000621016 FSHBP01225 129 aa7.57□□□□□ -1.2
CDH1-214ENST00000621016 K7EQD1 137 aa7.56□□□□□ -1.2
CDH1-214ENST00000621016 Q6JHZ5 121 aa7.56□□□□□ -1.2
CDH1-214ENST00000621016 C11orf45Q8TAV5 145 aa7.56□□□□□ -1.2
CDH1-214ENST00000621016 PSPHP1O15172 72 aa7.55□□□□□ -1.2
CDH1-214ENST00000621016 DAD1P61803 113 aa7.55□□□□□ -1.2
CDH1-214ENST00000621016 A0A087WYN8 130 aa7.55□□□□□ -1.2
CDH1-214ENST00000621016 TRAV10A0A0B4J240 114 aa7.54□□□□□ -1.2
CDH1-214ENST00000621016 A8MU10 97 aa7.54□□□□□ -1.2
CDH1-214ENST00000621016 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
CDH1-214ENST00000621016 LINC00158P58513 81 aa7.54□□□□□ -1.2
CDH1-214ENST00000621016 LINC01006Q8NI28 216 aa7.54□□□□□ -1.2
CDH1-214ENST00000621016 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
CDH1-214ENST00000621016 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 HAMPP81172 84 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 LECT2O14960 151 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 HIVEP1P15822 2718 aa7.53□□□□□ -1.2
CDH1-214ENST00000621016 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
CDH1-214ENST00000621016 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
CDH1-214ENST00000621016 PDZD2O15018 2839 aa7.52□□□□□ -1.21
CDH1-214ENST00000621016 NDUFA1O15239 70 aa7.51□□□□□ -1.21
CDH1-214ENST00000621016 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
CDH1-214ENST00000621016 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
CDH1-214ENST00000621016 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
CDH1-214ENST00000621016 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
CDH1-214ENST00000621016 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
CDH1-214ENST00000621016 PF4P02776 101 aa7.49□□□□□ -1.21
CDH1-214ENST00000621016 HTN3P15516 51 aa7.49□□□□□ -1.21
CDH1-214ENST00000621016 NANOS2P60321 138 aaKnown RBP7.48□□□□□ -1.21
CDH1-214ENST00000621016 C6orf223Q8N319 242 aa7.48□□□□□ -1.21
CDH1-214ENST00000621016 A8MTW9 85 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 EPM2AB3EWF7 344 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms