RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 C2orf48Q96LS8 159 aa10.34□□□□□ -0.75
PTPN9-206ENST00000618819 TMEM131Q92545 1883 aa10.34□□□□□ -0.75
PTPN9-206ENST00000618819 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
PTPN9-206ENST00000618819 KIF26AQ9ULI4 1882 aaPredicted RBP10.34□□□□□ -0.75
PTPN9-206ENST00000618819 Q8NA96 180 aa10.34□□□□□ -0.75
PTPN9-206ENST00000618819 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
PTPN9-206ENST00000618819 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
PTPN9-206ENST00000618819 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
PTPN9-206ENST00000618819 COL4A3Q01955 1670 aa10.32□□□□□ -0.76
PTPN9-206ENST00000618819 AMELXQ99217 191 aa10.32□□□□□ -0.76
PTPN9-206ENST00000618819 PSMG3-AS1Q96PY0 264 aa10.31□□□□□ -0.76
PTPN9-206ENST00000618819 KIAA0087Q14695 138 aa10.31□□□□□ -0.76
PTPN9-206ENST00000618819 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
PTPN9-206ENST00000618819 NUP210LQ5VU65 1888 aa10.31□□□□□ -0.76
PTPN9-206ENST00000618819 FBXL19-AS1Q494R0 122 aa10.31□□□□□ -0.76
PTPN9-206ENST00000618819 A0A096LNJ9 63 aa10.3□□□□□ -0.76
PTPN9-206ENST00000618819 GPR179Q6PRD1 2367 aa10.3□□□□□ -0.76
PTPN9-206ENST00000618819 NOTCH4Q99466 2003 aa10.3□□□□□ -0.76
PTPN9-206ENST00000618819 Q6ZSN1 163 aa10.3□□□□□ -0.76
PTPN9-206ENST00000618819 TANC1Q9C0D5 1861 aa10.29□□□□□ -0.76
PTPN9-206ENST00000618819 DSCAMO60469 2012 aa10.29□□□□□ -0.76
PTPN9-206ENST00000618819 BRI3O95415 125 aa10.28□□□□□ -0.76
PTPN9-206ENST00000618819 OXLD1Q5BKU9 147 aa10.28□□□□□ -0.76
PTPN9-206ENST00000618819 RPS28P62857 69 aaKnown RBP10.28□□□□□ -0.76
PTPN9-206ENST00000618819 ALPK3Q96L96 1907 aa10.27□□□□□ -0.76
PTPN9-206ENST00000618819 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.77
PTPN9-206ENST00000618819 FHL2Q14192 279 aa10.27□□□□□ -0.77
PTPN9-206ENST00000618819 AGRNO00468 2067 aa10.27□□□□□ -0.77
PTPN9-206ENST00000618819 Q6ZRU5 148 aa10.26□□□□□ -0.77
PTPN9-206ENST00000618819 CSPG4Q6UVK1 2322 aa10.26□□□□□ -0.77
PTPN9-206ENST00000618819 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
PTPN9-206ENST00000618819 PTPRQQ9UMZ3 2332 aa10.25□□□□□ -0.77
PTPN9-206ENST00000618819 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
PTPN9-206ENST00000618819 TM2D3Q9BRN9 247 aa10.24□□□□□ -0.77
PTPN9-206ENST00000618819 LY6G6DO95868 133 aa10.24□□□□□ -0.77
PTPN9-206ENST00000618819 SPACA4Q8TDM5 124 aa10.24□□□□□ -0.77
PTPN9-206ENST00000618819 TECTAO75443 2155 aa10.23□□□□□ -0.77
PTPN9-206ENST00000618819 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
PTPN9-206ENST00000618819 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
PTPN9-206ENST00000618819 A8MUN3 132 aa10.21□□□□□ -0.77
PTPN9-206ENST00000618819 TP53AIP1Q9HCN2 124 aa10.21□□□□□ -0.78
PTPN9-206ENST00000618819 Q8N2B8 174 aa10.21□□□□□ -0.78
PTPN9-206ENST00000618819 FAM19A4Q96LR4 140 aa10.21□□□□□ -0.78
PTPN9-206ENST00000618819 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
PTPN9-206ENST00000618819 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
PTPN9-206ENST00000618819 PCNX3Q9H6A9 2034 aa10.2□□□□□ -0.78
PTPN9-206ENST00000618819 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
PTPN9-206ENST00000618819 FAM218AQ96MZ4 157 aa10.2□□□□□ -0.78
PTPN9-206ENST00000618819 HIVEP2P31629 2446 aa10.19□□□□□ -0.78
PTPN9-206ENST00000618819 MOBPQ13875 183 aa10.19□□□□□ -0.78
PTPN9-206ENST00000618819 LINC01561Q8N1V8 128 aa10.19□□□□□ -0.78
PTPN9-206ENST00000618819 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
PTPN9-206ENST00000618819 EXPH5Q8NEV8 1989 aa10.18□□□□□ -0.78
PTPN9-206ENST00000618819 SPG11Q96JI7 2443 aa10.17□□□□□ -0.78
PTPN9-206ENST00000618819 OTOGLQ3ZCN5 2332 aa10.16□□□□□ -0.78
PTPN9-206ENST00000618819 ATG2AQ2TAZ0 1938 aa10.16□□□□□ -0.78
PTPN9-206ENST00000618819 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
PTPN9-206ENST00000618819 CEP192Q8TEP8 1941 aa10.16□□□□□ -0.78
PTPN9-206ENST00000618819 LYPD5Q6UWN5 251 aa10.15□□□□□ -0.78
PTPN9-206ENST00000618819 TRAV22A0A0B4J277 110 aa10.13□□□□□ -0.79
PTPN9-206ENST00000618819 APLNQ9ULZ1 77 aa10.13□□□□□ -0.79
PTPN9-206ENST00000618819 A0A1B0GUV1 79 aa10.13□□□□□ -0.79
PTPN9-206ENST00000618819 Q6ZQT0 140 aa10.13□□□□□ -0.79
PTPN9-206ENST00000618819 BCE1O60756 84 aa10.12□□□□□ -0.79
PTPN9-206ENST00000618819 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
PTPN9-206ENST00000618819 COA5Q86WW8 74 aa10.11□□□□□ -0.79
PTPN9-206ENST00000618819 F8WDY8 70 aa10.1□□□□□ -0.79
PTPN9-206ENST00000618819 CRIPTQ9P021 101 aa10.09□□□□□ -0.79
PTPN9-206ENST00000618819 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
PTPN9-206ENST00000618819 AVPP01185 164 aa10.09□□□□□ -0.79
PTPN9-206ENST00000618819 LINC00313P59037 77 aa10.09□□□□□ -0.79
PTPN9-206ENST00000618819 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
PTPN9-206ENST00000618819 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
PTPN9-206ENST00000618819 SMR3AQ99954 134 aa10.08□□□□□ -0.8
PTPN9-206ENST00000618819 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
PTPN9-206ENST00000618819 C1orf134Q5TEV5 83 aa10.08□□□□□ -0.8
PTPN9-206ENST00000618819 CD164Q04900 197 aa10.08□□□□□ -0.8
PTPN9-206ENST00000618819 H3BPC8 53 aa10.08□□□□□ -0.8
PTPN9-206ENST00000618819 IGLV1-51P01701 117 aa10.06□□□□□ -0.8
PTPN9-206ENST00000618819 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
PTPN9-206ENST00000618819 C2CD3Q4AC94 2353 aa10.06□□□□□ -0.8
PTPN9-206ENST00000618819 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
PTPN9-206ENST00000618819 SONP18583 2426 aaKnown RBP10.05□□□□□ -0.8
PTPN9-206ENST00000618819 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
PTPN9-206ENST00000618819 UQCR11O14957 56 aa10.04□□□□□ -0.8
PTPN9-206ENST00000618819 LINC00336Q6ZUF6 198 aa10.04□□□□□ -0.8
PTPN9-206ENST00000618819 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
PTPN9-206ENST00000618819 ELOF1P60002 83 aaKnown RBP10.04□□□□□ -0.8
PTPN9-206ENST00000618819 MIR22HGQ0VDD5 57 aa10.04□□□□□ -0.8
PTPN9-206ENST00000618819 COX8CQ7Z4L0 72 aa10.03□□□□□ -0.8
PTPN9-206ENST00000618819 LOC110117498A0A087WWA1 95 aa10.03□□□□□ -0.8
PTPN9-206ENST00000618819 CYP4F30PQ9H0H9 118 aa10.03□□□□□ -0.8
PTPN9-206ENST00000618819 Q96NJ1 140 aa10.02□□□□□ -0.81
PTPN9-206ENST00000618819 Q8NBF4 154 aa10.02□□□□□ -0.81
PTPN9-206ENST00000618819 COL5A1P20908 1838 aaPredicted RBP10.02□□□□□ -0.81
PTPN9-206ENST00000618819 RAI1Q7Z5J4 1906 aaPredicted RBP10.02□□□□□ -0.81
PTPN9-206ENST00000618819 TRBV7-4A0A0J9YYF1 115 aa10.01□□□□□ -0.81
PTPN9-206ENST00000618819 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
PTPN9-206ENST00000618819 KTN1-AS1Q86SY8 53 aa10□□□□□ -0.81
PTPN9-206ENST00000618819 K7EQZ3 153 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms