RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 NDUFC2-KCTD14E9PQ53 114 aa11.95□□□□□ -0.5
TCF3-219ENST00000610756 LINC00614P0C842 121 aa11.95□□□□□ -0.5
TCF3-219ENST00000610756 C18orf32Q8TCD1 76 aa11.95□□□□□ -0.5
TCF3-219ENST00000610756 TOMM7Q9P0U1 55 aa11.95□□□□□ -0.5
TCF3-219ENST00000610756 SRSF9Q13242 221 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCF3-219ENST00000610756 PMVKQ15126 192 aa11.94□□□□□ -0.5
TCF3-219ENST00000610756 GAGE2EQ4V326 116 aa11.94□□□□□ -0.5
TCF3-219ENST00000610756 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
TCF3-219ENST00000610756 GAGE2DQ9UEU5 116 aa11.94□□□□□ -0.5
TCF3-219ENST00000610756 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
TCF3-219ENST00000610756 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
TCF3-219ENST00000610756 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
TCF3-219ENST00000610756 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
TCF3-219ENST00000610756 SERTAD4-AS1Q5TG53 156 aa11.92□□□□□ -0.5
TCF3-219ENST00000610756 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
TCF3-219ENST00000610756 YPEL4Q96NS1 127 aa11.92□□□□□ -0.5
TCF3-219ENST00000610756 A0A096LNJ9 63 aa11.91□□□□□ -0.5
TCF3-219ENST00000610756 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
TCF3-219ENST00000610756 PDZD11Q5EBL8 140 aa11.91□□□□□ -0.5
TCF3-219ENST00000610756 SMIM1B2RUZ4 78 aa11.9□□□□□ -0.5
TCF3-219ENST00000610756 RAB5BP61020 215 aa11.9□□□□□ -0.5
TCF3-219ENST00000610756 PSORS1C2Q9UIG4 136 aa11.9□□□□□ -0.5
TCF3-219ENST00000610756 F8VRH5 84 aa11.89□□□□□ -0.51
TCF3-219ENST00000610756 CXCL5P42830 114 aa11.89□□□□□ -0.51
TCF3-219ENST00000610756 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
TCF3-219ENST00000610756 KRTAP7-1Q8IUC3 87 aa11.88□□□□□ -0.51
TCF3-219ENST00000610756 LINC01600Q96MT4 127 aa11.88□□□□□ -0.51
TCF3-219ENST00000610756 HBDP02042 147 aa11.87□□□□□ -0.51
TCF3-219ENST00000610756 FAM19A5Q7Z5A7 132 aaPredicted RBP11.86□□□□□ -0.51
TCF3-219ENST00000610756 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
TCF3-219ENST00000610756 REG3GQ6UW15 175 aa11.86□□□□□ -0.51
TCF3-219ENST00000610756 H3BRM9 83 aa11.85□□□□□ -0.51
TCF3-219ENST00000610756 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
TCF3-219ENST00000610756 NDUFA6P56556 154 aa11.85□□□□□ -0.51
TCF3-219ENST00000610756 PMCHL1Q16048 86 aa11.85□□□□□ -0.51
TCF3-219ENST00000610756 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
TCF3-219ENST00000610756 TNXBP22105 4242 aa11.84□□□□□ -0.51
TCF3-219ENST00000610756 ATP5LO75964 103 aa11.84□□□□□ -0.51
TCF3-219ENST00000610756 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
TCF3-219ENST00000610756 M0QXV9 152 aa11.83□□□□□ -0.52
TCF3-219ENST00000610756 KRTAP11-1Q8IUC1 163 aa11.83□□□□□ -0.52
TCF3-219ENST00000610756 HMCN2Q8NDA2 5059 aa11.82□□□□□ -0.52
TCF3-219ENST00000610756 ODF1Q14990 250 aa11.82□□□□□ -0.52
TCF3-219ENST00000610756 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
TCF3-219ENST00000610756 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
TCF3-219ENST00000610756 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
TCF3-219ENST00000610756 IGLV5-39A0A0G2JS06 123 aa11.8□□□□□ -0.52
TCF3-219ENST00000610756 IGLV7-43P04211 117 aa11.8□□□□□ -0.52
TCF3-219ENST00000610756 BAGE3Q86Y29 109 aa11.8□□□□□ -0.52
TCF3-219ENST00000610756 ZNF22P17026 224 aaPredicted RBP11.79□□□□□ -0.52
TCF3-219ENST00000610756 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
TCF3-219ENST00000610756 UBE2BP63146 152 aa11.79□□□□□ -0.52
TCF3-219ENST00000610756 SLC7A5P1Q8MH63 180 aa11.79□□□□□ -0.52
TCF3-219ENST00000610756 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
TCF3-219ENST00000610756 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
TCF3-219ENST00000610756 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
TCF3-219ENST00000610756 DIRC1Q969H9 104 aa11.75□□□□□ -0.53
TCF3-219ENST00000610756 TP73-AS1Q9UF72 201 aa11.75□□□□□ -0.53
TCF3-219ENST00000610756 TRGC2P03986 189 aa11.74□□□□□ -0.53
TCF3-219ENST00000610756 PLA2G2DQ9UNK4 145 aa11.74□□□□□ -0.53
TCF3-219ENST00000610756 CHTOPQ9Y3Y2 248 aaKnown RBP11.74□□□□□ -0.53
TCF3-219ENST00000610756 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
TCF3-219ENST00000610756 TMEM170BQ5T4T1 132 aa11.73□□□□□ -0.53
TCF3-219ENST00000610756 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
TCF3-219ENST00000610756 HSBP1O75506 76 aa11.71□□□□□ -0.53
TCF3-219ENST00000610756 MRPL55Q7Z7F7 128 aaKnown RBP11.71□□□□□ -0.53
TCF3-219ENST00000610756 H0Y9J4 135 aa11.7□□□□□ -0.54
TCF3-219ENST00000610756 NUPR1O60356 82 aa11.69□□□□□ -0.54
TCF3-219ENST00000610756 COX17Q14061 63 aa11.69□□□□□ -0.54
TCF3-219ENST00000610756 SFTA2Q6UW10 78 aa11.69□□□□□ -0.54
TCF3-219ENST00000610756 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
TCF3-219ENST00000610756 COLCA2A8K830 154 aa11.68□□□□□ -0.54
TCF3-219ENST00000610756 PFN2P35080 140 aa11.68□□□□□ -0.54
TCF3-219ENST00000610756 IGLV5-37A0A075B6J1 123 aa11.67□□□□□ -0.54
TCF3-219ENST00000610756 LINC00167Q96N53 147 aa11.67□□□□□ -0.54
TCF3-219ENST00000610756 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
TCF3-219ENST00000610756 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
TCF3-219ENST00000610756 ZNF861PO60384 105 aa11.66□□□□□ -0.54
TCF3-219ENST00000610756 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
TCF3-219ENST00000610756 LINC00310P59036 64 aa11.64□□□□□ -0.55
TCF3-219ENST00000610756 SERF1AO75920 110 aa11.63□□□□□ -0.55
TCF3-219ENST00000610756 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
TCF3-219ENST00000610756 RPL37AP8A6NKH3 93 aa11.62□□□□□ -0.55
TCF3-219ENST00000610756 LEPROTL1O95214 131 aa11.62□□□□□ -0.55
TCF3-219ENST00000610756 NKAPP1Q8N9T2 125 aa11.62□□□□□ -0.55
TCF3-219ENST00000610756 BCE1O60756 84 aa11.61□□□□□ -0.55
TCF3-219ENST00000610756 KRTAP1-4P0C5Y4 121 aa11.61□□□□□ -0.55
TCF3-219ENST00000610756 GAGE10A6NGK3 116 aa11.6□□□□□ -0.55
TCF3-219ENST00000610756 PRR26Q8N8Z3 221 aa11.6□□□□□ -0.55
TCF3-219ENST00000610756 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
TCF3-219ENST00000610756 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
TCF3-219ENST00000610756 VPREB1P12018 145 aa11.59□□□□□ -0.55
TCF3-219ENST00000610756 RPL28P46779 137 aaKnown RBP11.59□□□□□ -0.55
TCF3-219ENST00000610756 HSPB8Q9UJY1 196 aa11.59□□□□□ -0.55
TCF3-219ENST00000610756 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
TCF3-219ENST00000610756 LINC00158P58513 81 aa11.58□□□□□ -0.56
TCF3-219ENST00000610756 H0Y8G0 127 aa11.57□□□□□ -0.56
TCF3-219ENST00000610756 SCO1O75880 301 aa11.55□□□□□ -0.56
TCF3-219ENST00000610756 FABP4P15090 132 aa11.55□□□□□ -0.56
TCF3-219ENST00000610756 HERV-K104P63124 156 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms