RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	CIRBP	Q14011	172 aa	Known RBP	11.71	□□□□□ -0.53
RDH13-223	ENST00000610356	LINC01620	Q4KN68	170 aa		11.71	□□□□□ -0.53
RDH13-223	ENST00000610356	KPRP	Q5T749	579 aa	Predicted RBP	11.71	□□□□□ -0.53
RDH13-223	ENST00000610356	LINC00269	Q8N2A0	174 aa		11.71	□□□□□ -0.53
RDH13-223	ENST00000610356	COX7B2	Q8TF08	81 aa		11.71	□□□□□ -0.53
RDH13-223	ENST00000610356	ZNF625	Q96I27	306 aa	Predicted RBP	11.71	□□□□□ -0.53
RDH13-223	ENST00000610356	XCL1	P47992	114 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	HERV-K104	P63124	156 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	NANOS2	P60321	138 aa	Known RBP	11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	DEFB121	Q5J5C9	76 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	LYPD5	Q6UWN5	251 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	C5orf38	Q86SI9	138 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356		Q8N3U1	123 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	MDFI	Q99750	246 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	TM2D3	Q9BRN9	247 aa		11.7	□□□□□ -0.54
RDH13-223	ENST00000610356	TRBV10-2	A0A0K0K1G8	114 aa		11.68	□□□□□ -0.54
RDH13-223	ENST00000610356	REG3A	Q06141	175 aa		11.68	□□□□□ -0.54
RDH13-223	ENST00000610356	TOMM7	Q9P0U1	55 aa		11.68	□□□□□ -0.54
RDH13-223	ENST00000610356	COX6C	P09669	75 aa		11.68	□□□□□ -0.54
RDH13-223	ENST00000610356	PPDPF	Q9H3Y8	114 aa		11.68	□□□□□ -0.54
RDH13-223	ENST00000610356	DEFB131B	A0A096LNP1	70 aa		11.67	□□□□□ -0.54
RDH13-223	ENST00000610356	MEIG1	Q5JSS6	88 aa		11.67	□□□□□ -0.54
RDH13-223	ENST00000610356	COPS9	Q8WXC6	57 aa		11.67	□□□□□ -0.54
RDH13-223	ENST00000610356	MRAP	Q8TCY5	172 aa		11.66	□□□□□ -0.54
RDH13-223	ENST00000610356	NOTCH1	P46531	2555 aa		11.66	□□□□□ -0.54
RDH13-223	ENST00000610356	RPL13A	P40429	203 aa	Known RBP	11.66	□□□□□ -0.54
RDH13-223	ENST00000610356	LINC01561	Q8N1V8	128 aa		11.66	□□□□□ -0.54
RDH13-223	ENST00000610356	LINC00308	Q8TCZ7	52 aa		11.66	□□□□□ -0.54
RDH13-223	ENST00000610356	NPC2	P61916	151 aa		11.65	□□□□□ -0.54
RDH13-223	ENST00000610356	CD164L2	Q6UWJ8	174 aa		11.65	□□□□□ -0.54
RDH13-223	ENST00000610356	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.65	□□□□□ -0.54
RDH13-223	ENST00000610356	DAND5	Q8N907	189 aa		11.64	□□□□□ -0.55
RDH13-223	ENST00000610356		A0A0U1RRA0	63 aa		11.63	□□□□□ -0.55
RDH13-223	ENST00000610356	LST1	O00453	97 aa		11.63	□□□□□ -0.55
RDH13-223	ENST00000610356	IGLV10-54	A0A075B6I4	117 aa		11.62	□□□□□ -0.55
RDH13-223	ENST00000610356		H3BT86	120 aa		11.62	□□□□□ -0.55
RDH13-223	ENST00000610356	TENM3	Q9P273	2699 aa		11.62	□□□□□ -0.55
RDH13-223	ENST00000610356	COX7A2L	O14548	114 aa		11.62	□□□□□ -0.55
RDH13-223	ENST00000610356	XG	P55808	180 aa		11.62	□□□□□ -0.55
RDH13-223	ENST00000610356	KLK12	Q9UKR0	248 aa		11.62	□□□□□ -0.55
RDH13-223	ENST00000610356	NTN5	Q8WTR8	489 aa	Predicted RBP	11.61	□□□□□ -0.55
RDH13-223	ENST00000610356	PRR34	Q9NV39	138 aa		11.61	□□□□□ -0.55
RDH13-223	ENST00000610356	TRAV10	A0A0B4J240	114 aa		11.6	□□□□□ -0.55
RDH13-223	ENST00000610356	MT-ATP8	P03928	68 aa		11.6	□□□□□ -0.55
RDH13-223	ENST00000610356	C6orf226	Q5I0X4	101 aa		11.6	□□□□□ -0.55
RDH13-223	ENST00000610356		Q8IZM0	81 aa		11.6	□□□□□ -0.55
RDH13-223	ENST00000610356	WFDC10B	Q8IUB3	73 aa		11.6	□□□□□ -0.55
RDH13-223	ENST00000610356	C2orf82	Q6UX34	121 aa		11.59	□□□□□ -0.55
RDH13-223	ENST00000610356	NBEAL1	Q6ZS30	2694 aa		11.59	□□□□□ -0.55
RDH13-223	ENST00000610356	CRP	P02741	224 aa		11.58	□□□□□ -0.55
RDH13-223	ENST00000610356	MAL	P21145	153 aa		11.58	□□□□□ -0.55
RDH13-223	ENST00000610356	ESRG	Q1W209	222 aa		11.58	□□□□□ -0.55
RDH13-223	ENST00000610356	SOSTDC1	Q6X4U4	206 aa		11.58	□□□□□ -0.55
RDH13-223	ENST00000610356		A0A1B0GV72	72 aa		11.57	□□□□□ -0.56
RDH13-223	ENST00000610356	IBA57-AS1	B1ANH7	110 aa		11.57	□□□□□ -0.56
RDH13-223	ENST00000610356	CLEC2B	Q92478	149 aa		11.57	□□□□□ -0.56
RDH13-223	ENST00000610356	MGAM2	Q2M2H8	2515 aa		11.57	□□□□□ -0.56
RDH13-223	ENST00000610356	ENHO	Q6UWT2	76 aa		11.56	□□□□□ -0.56
RDH13-223	ENST00000610356	UBE2W	Q96B02	151 aa		11.56	□□□□□ -0.56
RDH13-223	ENST00000610356	TEX49	A0A1B0GTD5	131 aa		11.56	□□□□□ -0.56
RDH13-223	ENST00000610356	LINC00158	P58513	81 aa		11.55	□□□□□ -0.56
RDH13-223	ENST00000610356	CFAP161	Q6P656	301 aa		11.55	□□□□□ -0.56
RDH13-223	ENST00000610356	MIR7-3HG	Q8N6C7	128 aa		11.55	□□□□□ -0.56
RDH13-223	ENST00000610356	C15orf53	Q8NAA6	179 aa		11.55	□□□□□ -0.56
RDH13-223	ENST00000610356	TRAV8-4	A0A0B4J246	113 aa		11.54	□□□□□ -0.56
RDH13-223	ENST00000610356	CXCL5	P42830	114 aa		11.54	□□□□□ -0.56
RDH13-223	ENST00000610356	CKS1B	P61024	79 aa		11.54	□□□□□ -0.56
RDH13-223	ENST00000610356	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.54	□□□□□ -0.56
RDH13-223	ENST00000610356	KIAA0087	Q14695	138 aa		11.53	□□□□□ -0.56
RDH13-223	ENST00000610356	PFN2	P35080	140 aa		11.52	□□□□□ -0.57
RDH13-223	ENST00000610356	LINC01556	Q5JQF7	62 aa		11.51	□□□□□ -0.57
RDH13-223	ENST00000610356	KLK5	Q9Y337	293 aa	Predicted RBP	11.51	□□□□□ -0.57
RDH13-223	ENST00000610356	FAM240A	A0A1B0GVK7	77 aa		11.5	□□□□□ -0.57
RDH13-223	ENST00000610356	TRAV13-2	A0A0B4J235	113 aa		11.49	□□□□□ -0.57
RDH13-223	ENST00000610356	TRAC	P01848	142 aa		11.49	□□□□□ -0.57
RDH13-223	ENST00000610356	SPAG11B	Q08648	103 aa		11.49	□□□□□ -0.57
RDH13-223	ENST00000610356	B9D2	Q9BPU9	175 aa		11.47	□□□□□ -0.57
RDH13-223	ENST00000610356	SND1-IT1	Q9HBX3	110 aa		11.47	□□□□□ -0.57
RDH13-223	ENST00000610356	RPL28	P46779	137 aa	Known RBP	11.47	□□□□□ -0.57
RDH13-223	ENST00000610356	CCL18	P55774	89 aa		11.47	□□□□□ -0.57
RDH13-223	ENST00000610356	DNAH10OS	P0CZ25	163 aa		11.46	□□□□□ -0.58
RDH13-223	ENST00000610356	COX17	Q14061	63 aa		11.46	□□□□□ -0.58
RDH13-223	ENST00000610356		Q6Q795	121 aa		11.46	□□□□□ -0.58
RDH13-223	ENST00000610356	SNCG	O76070	127 aa		11.45	□□□□□ -0.58
RDH13-223	ENST00000610356	LINC00588	Q9Y4M8	146 aa		11.45	□□□□□ -0.58
RDH13-223	ENST00000610356	KRTAP26-1	Q6PEX3	210 aa		11.44	□□□□□ -0.58
RDH13-223	ENST00000610356	C1orf43	Q9BWL3	253 aa		11.44	□□□□□ -0.58
RDH13-223	ENST00000610356	IGKV2-28	A0A075B6P5	120 aa		11.43	□□□□□ -0.58
RDH13-223	ENST00000610356	IGKV2D-28	P01615	120 aa		11.43	□□□□□ -0.58
RDH13-223	ENST00000610356	C6orf223	Q8N319	242 aa		11.43	□□□□□ -0.58
RDH13-223	ENST00000610356	GAGE2B	Q13066	116 aa		11.42	□□□□□ -0.58
RDH13-223	ENST00000610356	GAGE2E	Q4V326	116 aa		11.42	□□□□□ -0.58
RDH13-223	ENST00000610356	LINC00337	Q8N6G1	96 aa		11.42	□□□□□ -0.58
RDH13-223	ENST00000610356	GAGE2D	Q9UEU5	116 aa		11.42	□□□□□ -0.58
RDH13-223	ENST00000610356	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.41	□□□□□ -0.58
RDH13-223	ENST00000610356	LINC00526	Q96FQ7	95 aa		11.41	□□□□□ -0.58
RDH13-223	ENST00000610356	ACYP1	P07311	99 aa		11.41	□□□□□ -0.58
RDH13-223	ENST00000610356	IGKV2D-24	A0A075B6R9	120 aa		11.4	□□□□□ -0.58
RDH13-223	ENST00000610356	C9orf116	Q5BN46	136 aa	Predicted RBP	11.4	□□□□□ -0.58
RDH13-223	ENST00000610356	C10orf25	Q5T742	122 aa		11.4	□□□□□ -0.58

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