RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
LMBR1-220ENST00000609081 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
LMBR1-220ENST00000609081 CXCL5P42830 114 aa9.37□□□□□ -0.91
LMBR1-220ENST00000609081 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
LMBR1-220ENST00000609081 TRAPPC1Q9Y5R8 145 aa9.37□□□□□ -0.91
LMBR1-220ENST00000609081 LOC100996750A0A140TA64 210 aa9.36□□□□□ -0.91
LMBR1-220ENST00000609081 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
LMBR1-220ENST00000609081 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
LMBR1-220ENST00000609081 KRTAP4-6Q9BYQ5 205 aa9.36□□□□□ -0.91
LMBR1-220ENST00000609081 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
LMBR1-220ENST00000609081 IGLV5-45A0A087WSX0 123 aa9.35□□□□□ -0.91
LMBR1-220ENST00000609081 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
LMBR1-220ENST00000609081 PMVKQ15126 192 aa9.35□□□□□ -0.91
LMBR1-220ENST00000609081 GAGE2EQ4V326 116 aa9.35□□□□□ -0.91
LMBR1-220ENST00000609081 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
LMBR1-220ENST00000609081 CST9LQ9H4G1 147 aa9.35□□□□□ -0.91
LMBR1-220ENST00000609081 GAGE2DQ9UEU5 116 aa9.35□□□□□ -0.91
LMBR1-220ENST00000609081 F8VRH5 84 aa9.34□□□□□ -0.91
LMBR1-220ENST00000609081 MT1HL1P0DM35 61 aa9.34□□□□□ -0.91
LMBR1-220ENST00000609081 RAB5BP61020 215 aa9.34□□□□□ -0.91
LMBR1-220ENST00000609081 PDZD11Q5EBL8 140 aa9.34□□□□□ -0.91
LMBR1-220ENST00000609081 LINC00614P0C842 121 aa9.33□□□□□ -0.92
LMBR1-220ENST00000609081 ODF1Q14990 250 aa9.33□□□□□ -0.92
LMBR1-220ENST00000609081 PHF5AQ7RTV0 110 aaKnown RBP9.33□□□□□ -0.92
LMBR1-220ENST00000609081 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
LMBR1-220ENST00000609081 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
LMBR1-220ENST00000609081 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
LMBR1-220ENST00000609081 SMIM1B2RUZ4 78 aa9.32□□□□□ -0.92
LMBR1-220ENST00000609081 H3BRM9 83 aa9.31□□□□□ -0.92
LMBR1-220ENST00000609081 LCE2BO14633 110 aa9.31□□□□□ -0.92
LMBR1-220ENST00000609081 HBDP02042 147 aa9.31□□□□□ -0.92
LMBR1-220ENST00000609081 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
LMBR1-220ENST00000609081 COX7B2Q8TF08 81 aa9.3□□□□□ -0.92
LMBR1-220ENST00000609081 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
LMBR1-220ENST00000609081 M0QXV9 152 aa9.29□□□□□ -0.92
LMBR1-220ENST00000609081 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
LMBR1-220ENST00000609081 C9orf129Q5T035 196 aaKnown RBP9.29□□□□□ -0.92
LMBR1-220ENST00000609081 A0A096LNJ9 63 aa9.28□□□□□ -0.92
LMBR1-220ENST00000609081 ATP5LO75964 103 aa9.28□□□□□ -0.92
LMBR1-220ENST00000609081 IGLC3P0DOY3 106 aa9.27□□□□□ -0.93
LMBR1-220ENST00000609081 UBE2BP63146 152 aa9.27□□□□□ -0.93
LMBR1-220ENST00000609081 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
LMBR1-220ENST00000609081 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
LMBR1-220ENST00000609081 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
LMBR1-220ENST00000609081 LBHQ53QV2 105 aaPredicted RBP9.26□□□□□ -0.93
LMBR1-220ENST00000609081 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
LMBR1-220ENST00000609081 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
LMBR1-220ENST00000609081 YPEL4Q96NS1 127 aa9.26□□□□□ -0.93
LMBR1-220ENST00000609081 NDUFA6P56556 154 aa9.25□□□□□ -0.93
LMBR1-220ENST00000609081 CHCHD1Q96BP2 118 aaKnown RBP9.25□□□□□ -0.93
LMBR1-220ENST00000609081 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
LMBR1-220ENST00000609081 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
LMBR1-220ENST00000609081 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
LMBR1-220ENST00000609081 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
LMBR1-220ENST00000609081 KRTAP10-8P60410 259 aa9.23□□□□□ -0.93
LMBR1-220ENST00000609081 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
LMBR1-220ENST00000609081 BAGE3Q86Y29 109 aa9.22□□□□□ -0.93
LMBR1-220ENST00000609081 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
LMBR1-220ENST00000609081 TNXBP22105 4242 aa9.22□□□□□ -0.93
LMBR1-220ENST00000609081 NUPR1O60356 82 aa9.21□□□□□ -0.94
LMBR1-220ENST00000609081 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.94
LMBR1-220ENST00000609081 PMCHL1Q16048 86 aa9.21□□□□□ -0.94
LMBR1-220ENST00000609081 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
LMBR1-220ENST00000609081 H0Y9J4 135 aa9.2□□□□□ -0.94
LMBR1-220ENST00000609081 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
LMBR1-220ENST00000609081 TRAV12-1A0A0B4J245 112 aa9.19□□□□□ -0.94
LMBR1-220ENST00000609081 COX17Q14061 63 aa9.19□□□□□ -0.94
LMBR1-220ENST00000609081 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
LMBR1-220ENST00000609081 C11orf86A6NJI1 115 aa9.18□□□□□ -0.94
LMBR1-220ENST00000609081 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
LMBR1-220ENST00000609081 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
LMBR1-220ENST00000609081 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
LMBR1-220ENST00000609081 HSBP1O75506 76 aa9.17□□□□□ -0.94
LMBR1-220ENST00000609081 TMEM170BQ5T4T1 132 aa9.17□□□□□ -0.94
LMBR1-220ENST00000609081 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
LMBR1-220ENST00000609081 ZNF861PO60384 105 aa9.15□□□□□ -0.94
LMBR1-220ENST00000609081 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
LMBR1-220ENST00000609081 ERG28Q9UKR5 140 aa9.15□□□□□ -0.94
LMBR1-220ENST00000609081 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
LMBR1-220ENST00000609081 TRGC2P03986 189 aa9.13□□□□□ -0.95
LMBR1-220ENST00000609081 PFN2P35080 140 aa9.13□□□□□ -0.95
LMBR1-220ENST00000609081 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
LMBR1-220ENST00000609081 LINC00167Q96N53 147 aa9.13□□□□□ -0.95
LMBR1-220ENST00000609081 BCE1O60756 84 aa9.12□□□□□ -0.95
LMBR1-220ENST00000609081 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
LMBR1-220ENST00000609081 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
LMBR1-220ENST00000609081 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
LMBR1-220ENST00000609081 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
LMBR1-220ENST00000609081 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
LMBR1-220ENST00000609081 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
LMBR1-220ENST00000609081 SLC7A5P1Q8MH63 180 aa9.1□□□□□ -0.95
LMBR1-220ENST00000609081 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
LMBR1-220ENST00000609081 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
LMBR1-220ENST00000609081 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
LMBR1-220ENST00000609081 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
LMBR1-220ENST00000609081 SERF1AO75920 110 aa9.08□□□□□ -0.96
LMBR1-220ENST00000609081 HERV-K104P63124 156 aa9.08□□□□□ -0.96
LMBR1-220ENST00000609081 PRR26Q8N8Z3 221 aa9.08□□□□□ -0.96
LMBR1-220ENST00000609081 HSPB8Q9UJY1 196 aa9.08□□□□□ -0.96
LMBR1-220ENST00000609081 GAGE10A6NGK3 116 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms