RNA–Protein interactions for RNA: ENST00000606106.1

NECAB3-217, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 591 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-217ENST00000606106 PMVKQ15126 192 aa12.22□□□□□ -0.45
NECAB3-217ENST00000606106 C9orf116Q5BN46 136 aaPredicted RBP12.22□□□□□ -0.45
NECAB3-217ENST00000606106 C2orf82Q6UX34 121 aa12.21□□□□□ -0.45
NECAB3-217ENST00000606106 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
NECAB3-217ENST00000606106 RAB5BP61020 215 aa12.2□□□□□ -0.46
NECAB3-217ENST00000606106 SMIM1B2RUZ4 78 aa12.19□□□□□ -0.46
NECAB3-217ENST00000606106 HBDP02042 147 aa12.19□□□□□ -0.46
NECAB3-217ENST00000606106 PRSS2P07478 247 aa12.19□□□□□ -0.46
NECAB3-217ENST00000606106 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
NECAB3-217ENST00000606106 PACRGQ96M98 296 aaPredicted RBP12.19□□□□□ -0.46
NECAB3-217ENST00000606106 CXCL5P42830 114 aa12.18□□□□□ -0.46
NECAB3-217ENST00000606106 ODF1Q14990 250 aa12.18□□□□□ -0.46
NECAB3-217ENST00000606106 LINC00469Q8N7U9 141 aa12.18□□□□□ -0.46
NECAB3-217ENST00000606106 C6orf226Q5I0X4 101 aa12.17□□□□□ -0.46
NECAB3-217ENST00000606106 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
NECAB3-217ENST00000606106 CKS1BP61024 79 aa12.16□□□□□ -0.46
NECAB3-217ENST00000606106 TNXBP22105 4242 aa12.16□□□□□ -0.46
NECAB3-217ENST00000606106 F8VRH5 84 aa12.15□□□□□ -0.46
NECAB3-217ENST00000606106 TOMM7Q9P0U1 55 aa12.15□□□□□ -0.46
NECAB3-217ENST00000606106 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■□□□□ 8.9
NECAB3-217ENST00000606106 KRTAP7-1Q8IUC3 87 aa12.14□□□□□ -0.47
NECAB3-217ENST00000606106 CBLN2Q8IUK8 224 aa12.14□□□□□ -0.47
NECAB3-217ENST00000606106 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
NECAB3-217ENST00000606106 ATP5LO75964 103 aa12.13□□□□□ -0.47
NECAB3-217ENST00000606106 MT1HL1P0DM35 61 aa12.12□□□□□ -0.47
NECAB3-217ENST00000606106 GAGE2EQ4V326 116 aa12.12□□□□□ -0.47
NECAB3-217ENST00000606106 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
NECAB3-217ENST00000606106 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
NECAB3-217ENST00000606106 GAGE2DQ9UEU5 116 aa12.12□□□□□ -0.47
NECAB3-217ENST00000606106 HMCN2Q8NDA2 5059 aa12.11□□□□□ -0.47
NECAB3-217ENST00000606106 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
NECAB3-217ENST00000606106 FAM168BA1KXE4 195 aa12.11□□□□□ -0.47
NECAB3-217ENST00000606106 PHF5AQ7RTV0 110 aaKnown RBP12.11□□□□□ -0.47
NECAB3-217ENST00000606106 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
NECAB3-217ENST00000606106 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
NECAB3-217ENST00000606106 H3BRM9 83 aa12.1□□□□□ -0.47
NECAB3-217ENST00000606106 PMCHL1Q16048 86 aa12.1□□□□□ -0.47
NECAB3-217ENST00000606106 PSORS1C2Q9UIG4 136 aa12.1□□□□□ -0.47
NECAB3-217ENST00000606106 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
NECAB3-217ENST00000606106 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
NECAB3-217ENST00000606106 TRAV12-1A0A0B4J245 112 aa12.06□□□□□ -0.48
NECAB3-217ENST00000606106 FAM19A5Q7Z5A7 132 aaPredicted RBP12.06□□□□□ -0.48
NECAB3-217ENST00000606106 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
NECAB3-217ENST00000606106 M0QXV9 152 aa12.05□□□□□ -0.48
NECAB3-217ENST00000606106 TRGC2P03986 189 aa12.04□□□□□ -0.48
NECAB3-217ENST00000606106 BAGE3Q86Y29 109 aa12.04□□□□□ -0.48
NECAB3-217ENST00000606106 KRTAP11-1Q8IUC1 163 aa12.04□□□□□ -0.48
NECAB3-217ENST00000606106 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
NECAB3-217ENST00000606106 NDUFA6P56556 154 aa12.03□□□□□ -0.48
NECAB3-217ENST00000606106 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
NECAB3-217ENST00000606106 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
NECAB3-217ENST00000606106 COLCA2A8K830 154 aa12.02□□□□□ -0.49
NECAB3-217ENST00000606106 REG3GQ6UW15 175 aa12.02□□□□□ -0.49
NECAB3-217ENST00000606106 IFI27L1Q96BM0 104 aa12.02□□□□□ -0.49
NECAB3-217ENST00000606106 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.49
NECAB3-217ENST00000606106 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
NECAB3-217ENST00000606106 XAGE1AQ9HD64 81 aa12.01□□□□□ -0.49
NECAB3-217ENST00000606106 HSBP1O75506 76 aa12□□□□□ -0.49
NECAB3-217ENST00000606106 IGLV7-43P04211 117 aa12□□□□□ -0.49
NECAB3-217ENST00000606106 LINC00310P59036 64 aa12□□□□□ -0.49
NECAB3-217ENST00000606106 SFTA2Q6UW10 78 aa12□□□□□ -0.49
NECAB3-217ENST00000606106 CHTOPQ9Y3Y2 248 aaKnown RBP12□□□□□ -0.49
NECAB3-217ENST00000606106 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
NECAB3-217ENST00000606106 IGLV5-37A0A075B6J1 123 aa11.97□□□□□ -0.49
NECAB3-217ENST00000606106 LBHQ53QV2 105 aaPredicted RBP11.97□□□□□ -0.49
NECAB3-217ENST00000606106 KRTAP10-8P60410 259 aa11.96□□□□□ -0.49
NECAB3-217ENST00000606106 COX17Q14061 63 aa11.96□□□□□ -0.49
NECAB3-217ENST00000606106 TMEM170BQ5T4T1 132 aa11.96□□□□□ -0.49
NECAB3-217ENST00000606106 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
NECAB3-217ENST00000606106 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
NECAB3-217ENST00000606106 SERF1AO75920 110 aa11.95□□□□□ -0.5
NECAB3-217ENST00000606106 UBE2BP63146 152 aa11.95□□□□□ -0.5
NECAB3-217ENST00000606106 FAM19A2Q8N3H0 131 aa11.95□□□□□ -0.5
NECAB3-217ENST00000606106 NUPR1O60356 82 aa11.94□□□□□ -0.5
NECAB3-217ENST00000606106 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
NECAB3-217ENST00000606106 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
NECAB3-217ENST00000606106 ERG28Q9UKR5 140 aa11.93□□□□□ -0.5
NECAB3-217ENST00000606106 H0Y9J4 135 aa11.92□□□□□ -0.5
NECAB3-217ENST00000606106 LEPROTL1O95214 131 aa11.91□□□□□ -0.5
NECAB3-217ENST00000606106 LINC00167Q96N53 147 aa11.88□□□□□ -0.51
NECAB3-217ENST00000606106 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
NECAB3-217ENST00000606106 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
NECAB3-217ENST00000606106 PFN2P35080 140 aa11.87□□□□□ -0.51
NECAB3-217ENST00000606106 ZNF861PO60384 105 aa11.86□□□□□ -0.51
NECAB3-217ENST00000606106 KRTAP1-4P0C5Y4 121 aa11.85□□□□□ -0.51
NECAB3-217ENST00000606106 VPREB1P12018 145 aa11.85□□□□□ -0.51
NECAB3-217ENST00000606106 PLNP26678 52 aa11.85□□□□□ -0.51
NECAB3-217ENST00000606106 BCE1O60756 84 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
NECAB3-217ENST00000606106 NKAPP1Q8N9T2 125 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
NECAB3-217ENST00000606106 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms