RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
TUBE1-204ENST00000603621 C6orf226Q5I0X4 101 aa9.02□□□□□ -0.97
TUBE1-204ENST00000603621 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
TUBE1-204ENST00000603621 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
TUBE1-204ENST00000603621 NDUFA6P56556 154 aa9.01□□□□□ -0.97
TUBE1-204ENST00000603621 CKS1BP61024 79 aa9.01□□□□□ -0.97
TUBE1-204ENST00000603621 Q6ZRP5 223 aa9.01□□□□□ -0.97
TUBE1-204ENST00000603621 CBLN2Q8IUK8 224 aa9.01□□□□□ -0.97
TUBE1-204ENST00000603621 YPEL4Q96NS1 127 aa9.01□□□□□ -0.97
TUBE1-204ENST00000603621 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
TUBE1-204ENST00000603621 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
TUBE1-204ENST00000603621 PMVKQ15126 192 aa9□□□□□ -0.97
TUBE1-204ENST00000603621 A0A096LNJ9 63 aa8.99□□□□□ -0.97
TUBE1-204ENST00000603621 TRBV30A0A0K0K1B3 111 aa8.99□□□□□ -0.97
TUBE1-204ENST00000603621 HBDP02042 147 aa8.99□□□□□ -0.97
TUBE1-204ENST00000603621 RAB5BP61020 215 aa8.99□□□□□ -0.97
TUBE1-204ENST00000603621 PRR3P79522 188 aaKnown RBP8.99□□□□□ -0.97
TUBE1-204ENST00000603621 Q8IZM0 81 aa8.99□□□□□ -0.97
TUBE1-204ENST00000603621 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
TUBE1-204ENST00000603621 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
TUBE1-204ENST00000603621 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
TUBE1-204ENST00000603621 OXTP01178 125 aa8.97□□□□□ -0.97
TUBE1-204ENST00000603621 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
TUBE1-204ENST00000603621 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
TUBE1-204ENST00000603621 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
TUBE1-204ENST00000603621 NDUFC2-KCTD14E9PQ53 114 aa8.96□□□□□ -0.98
TUBE1-204ENST00000603621 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
TUBE1-204ENST00000603621 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
TUBE1-204ENST00000603621 COX7B2Q8TF08 81 aa8.95□□□□□ -0.98
TUBE1-204ENST00000603621 F8VRH5 84 aa8.93□□□□□ -0.98
TUBE1-204ENST00000603621 H3BRM9 83 aa8.93□□□□□ -0.98
TUBE1-204ENST00000603621 ATP5LO75964 103 aa8.93□□□□□ -0.98
TUBE1-204ENST00000603621 TRGC2P03986 189 aa8.93□□□□□ -0.98
TUBE1-204ENST00000603621 IGLC3P0DOY3 106 aa8.93□□□□□ -0.98
TUBE1-204ENST00000603621 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
TUBE1-204ENST00000603621 BAGE3Q86Y29 109 aa8.93□□□□□ -0.98
TUBE1-204ENST00000603621 CXCL5P42830 114 aa8.92□□□□□ -0.98
TUBE1-204ENST00000603621 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
TUBE1-204ENST00000603621 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
TUBE1-204ENST00000603621 C1orf137Q5JT78 98 aa8.91□□□□□ -0.98
TUBE1-204ENST00000603621 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
TUBE1-204ENST00000603621 M0QXV9 152 aa8.9□□□□□ -0.98
TUBE1-204ENST00000603621 ZNF22P17026 224 aaPredicted RBP8.9□□□□□ -0.98
TUBE1-204ENST00000603621 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
TUBE1-204ENST00000603621 HSBP1O75506 76 aa8.89□□□□□ -0.99
TUBE1-204ENST00000603621 UBE2BP63146 152 aa8.89□□□□□ -0.99
TUBE1-204ENST00000603621 SPINK6Q6UWN8 80 aa8.89□□□□□ -0.99
TUBE1-204ENST00000603621 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
TUBE1-204ENST00000603621 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
TUBE1-204ENST00000603621 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
TUBE1-204ENST00000603621 TMEM170BQ5T4T1 132 aa8.88□□□□□ -0.99
TUBE1-204ENST00000603621 KRTAP11-1Q8IUC1 163 aa8.88□□□□□ -0.99
TUBE1-204ENST00000603621 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
TUBE1-204ENST00000603621 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
TUBE1-204ENST00000603621 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
TUBE1-204ENST00000603621 COLCA2A8K830 154 aa8.86□□□□□ -0.99
TUBE1-204ENST00000603621 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
TUBE1-204ENST00000603621 H0Y8G0 127 aa8.85□□□□□ -0.99
TUBE1-204ENST00000603621 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
TUBE1-204ENST00000603621 SCO1O75880 301 aa8.84□□□□□ -0.99
TUBE1-204ENST00000603621 SERF1AO75920 110 aa8.84□□□□□ -0.99
TUBE1-204ENST00000603621 MT1HL1P0DM35 61 aa8.84□□□□□ -0.99
TUBE1-204ENST00000603621 PFN2P35080 140 aa8.84□□□□□ -0.99
TUBE1-204ENST00000603621 REG3GQ6UW15 175 aa8.84□□□□□ -0.99
TUBE1-204ENST00000603621 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
TUBE1-204ENST00000603621 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
TUBE1-204ENST00000603621 IGLV7-43P04211 117 aa8.83□□□□□ -1
TUBE1-204ENST00000603621 LINC00310P59036 64 aa8.82□□□□□ -1
TUBE1-204ENST00000603621 LINC01600Q96MT4 127 aa8.82□□□□□ -1
TUBE1-204ENST00000603621 NUPR1O60356 82 aa8.81□□□□□ -1
TUBE1-204ENST00000603621 LEPROTL1O95214 131 aa8.81□□□□□ -1
TUBE1-204ENST00000603621 FABP4P15090 132 aa8.81□□□□□ -1
TUBE1-204ENST00000603621 LBHQ53QV2 105 aaPredicted RBP8.81□□□□□ -1
TUBE1-204ENST00000603621 TNXBP22105 4242 aa8.81□□□□□ -1
TUBE1-204ENST00000603621 TMEM223A0PJW6 202 aa8.8□□□□□ -1
TUBE1-204ENST00000603621 ERG28Q9UKR5 140 aa8.8□□□□□ -1
TUBE1-204ENST00000603621 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
TUBE1-204ENST00000603621 GAGE10A6NGK3 116 aa8.78□□□□□ -1
TUBE1-204ENST00000603621 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
TUBE1-204ENST00000603621 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
TUBE1-204ENST00000603621 DIRC1Q969H9 104 aa8.78□□□□□ -1
TUBE1-204ENST00000603621 ODF1Q14990 250 aa8.77□□□□□ -1.01
TUBE1-204ENST00000603621 NKAPP1Q8N9T2 125 aa8.77□□□□□ -1.01
TUBE1-204ENST00000603621 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
TUBE1-204ENST00000603621 TP73-AS1Q9UF72 201 aa8.77□□□□□ -1.01
TUBE1-204ENST00000603621 HSPB8Q9UJY1 196 aa8.77□□□□□ -1.01
TUBE1-204ENST00000603621 PLA2G2DQ9UNK4 145 aa8.77□□□□□ -1.01
TUBE1-204ENST00000603621 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
TUBE1-204ENST00000603621 LINC00158P58513 81 aa8.76□□□□□ -1.01
TUBE1-204ENST00000603621 SND1-IT1Q9HBX3 110 aa8.76□□□□□ -1.01
TUBE1-204ENST00000603621 H0Y9J4 135 aa8.75□□□□□ -1.01
TUBE1-204ENST00000603621 COX17Q14061 63 aa8.75□□□□□ -1.01
TUBE1-204ENST00000603621 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
TUBE1-204ENST00000603621 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
TUBE1-204ENST00000603621 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
TUBE1-204ENST00000603621 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
TUBE1-204ENST00000603621 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BKO60814 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BJP06899 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BOP23527 126 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms