RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 C2orf82Q6UX34 121 aa10.7□□□□□ -0.7
HERC3-214ENST00000601319 Q6ZRP5 223 aa10.7□□□□□ -0.7
HERC3-214ENST00000601319 YPEL4Q96NS1 127 aa10.7□□□□□ -0.7
HERC3-214ENST00000601319 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
HERC3-214ENST00000601319 PRSS2P07478 247 aa10.69□□□□□ -0.7
HERC3-214ENST00000601319 PACRGQ96M98 296 aaPredicted RBP10.69□□□□□ -0.7
HERC3-214ENST00000601319 CST9LQ9H4G1 147 aa10.69□□□□□ -0.7
HERC3-214ENST00000601319 A0A096LNJ9 63 aa10.68□□□□□ -0.7
HERC3-214ENST00000601319 NDUFC2-KCTD14E9PQ53 114 aa10.68□□□□□ -0.7
HERC3-214ENST00000601319 PMVKQ15126 192 aa10.68□□□□□ -0.7
HERC3-214ENST00000601319 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
HERC3-214ENST00000601319 LINC00614P0C842 121 aa10.67□□□□□ -0.7
HERC3-214ENST00000601319 CKS1BP61024 79 aa10.67□□□□□ -0.7
HERC3-214ENST00000601319 LINC00469Q8N7U9 141 aa10.67□□□□□ -0.7
HERC3-214ENST00000601319 SMIM1B2RUZ4 78 aa10.66□□□□□ -0.7
HERC3-214ENST00000601319 CXCL5P42830 114 aa10.66□□□□□ -0.7
HERC3-214ENST00000601319 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
HERC3-214ENST00000601319 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
HERC3-214ENST00000601319 HBDP02042 147 aa10.65□□□□□ -0.7
HERC3-214ENST00000601319 F8VRH5 84 aa10.64□□□□□ -0.71
HERC3-214ENST00000601319 RAB5BP61020 215 aa10.64□□□□□ -0.71
HERC3-214ENST00000601319 PDZD11Q5EBL8 140 aa10.64□□□□□ -0.71
HERC3-214ENST00000601319 GAGE2EQ4V326 116 aa10.63□□□□□ -0.71
HERC3-214ENST00000601319 SPINK6Q6UWN8 80 aa10.63□□□□□ -0.71
HERC3-214ENST00000601319 GAGE2DQ9UEU5 116 aa10.63□□□□□ -0.71
HERC3-214ENST00000601319 FAM168BA1KXE4 195 aa10.62□□□□□ -0.71
HERC3-214ENST00000601319 PHF5AQ7RTV0 110 aaKnown RBP10.62□□□□□ -0.71
HERC3-214ENST00000601319 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
HERC3-214ENST00000601319 IGLC3P0DOY3 106 aa10.61□□□□□ -0.71
HERC3-214ENST00000601319 SRSF9Q13242 221 aaKnown RBP eCLIP10.61□□□□□ -0.71
HERC3-214ENST00000601319 COX7B2Q8TF08 81 aa10.61□□□□□ -0.71
HERC3-214ENST00000601319 PSORS1C2Q9UIG4 136 aa10.61□□□□□ -0.71
HERC3-214ENST00000601319 H3BRM9 83 aa10.6□□□□□ -0.71
HERC3-214ENST00000601319 ATP5LO75964 103 aa10.6□□□□□ -0.71
HERC3-214ENST00000601319 ODF1Q14990 250 aa10.6□□□□□ -0.71
HERC3-214ENST00000601319 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
HERC3-214ENST00000601319 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
HERC3-214ENST00000601319 KRTAP7-1Q8IUC3 87 aa10.6□□□□□ -0.71
HERC3-214ENST00000601319 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
HERC3-214ENST00000601319 LOC100996750A0A140TA64 210 aa10.59□□□□□ -0.71
HERC3-214ENST00000601319 PMCHL1Q16048 86 aa10.59□□□□□ -0.71
HERC3-214ENST00000601319 CHCHD1Q96BP2 118 aaKnown RBP10.59□□□□□ -0.71
HERC3-214ENST00000601319 KRTAP4-6Q9BYQ5 205 aa10.59□□□□□ -0.71
HERC3-214ENST00000601319 M0QXV9 152 aa10.58□□□□□ -0.72
HERC3-214ENST00000601319 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
HERC3-214ENST00000601319 SPINK8P0C7L1 97 aa10.57□□□□□ -0.72
HERC3-214ENST00000601319 LINC01600Q96MT4 127 aa10.57□□□□□ -0.72
HERC3-214ENST00000601319 IGLV5-39A0A0G2JS06 123 aa10.56□□□□□ -0.72
HERC3-214ENST00000601319 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
HERC3-214ENST00000601319 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
HERC3-214ENST00000601319 NDUFA6P56556 154 aa10.55□□□□□ -0.72
HERC3-214ENST00000601319 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
HERC3-214ENST00000601319 KRTAP11-1Q8IUC1 163 aa10.54□□□□□ -0.72
HERC3-214ENST00000601319 SLC7A5P1Q8MH63 180 aa10.54□□□□□ -0.72
HERC3-214ENST00000601319 XAGE1AQ9HD64 81 aa10.53□□□□□ -0.72
HERC3-214ENST00000601319 C11orf86A6NJI1 115 aa10.52□□□□□ -0.73
HERC3-214ENST00000601319 IGLV7-43P04211 117 aa10.52□□□□□ -0.73
HERC3-214ENST00000601319 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
HERC3-214ENST00000601319 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
HERC3-214ENST00000601319 UBE2BP63146 152 aa10.51□□□□□ -0.73
HERC3-214ENST00000601319 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
HERC3-214ENST00000601319 TNXBP22105 4242 aa10.5□□□□□ -0.73
HERC3-214ENST00000601319 TRGC2P03986 189 aa10.5□□□□□ -0.73
HERC3-214ENST00000601319 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
HERC3-214ENST00000601319 HMCN2Q8NDA2 5059 aa10.49□□□□□ -0.73
HERC3-214ENST00000601319 HSBP1O75506 76 aa10.49□□□□□ -0.73
HERC3-214ENST00000601319 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
HERC3-214ENST00000601319 PLA2G2DQ9UNK4 145 aa10.49□□□□□ -0.73
HERC3-214ENST00000601319 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
HERC3-214ENST00000601319 LBHQ53QV2 105 aaPredicted RBP10.48□□□□□ -0.73
HERC3-214ENST00000601319 LCE2CQ5TA81 110 aa10.48□□□□□ -0.73
HERC3-214ENST00000601319 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
HERC3-214ENST00000601319 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
HERC3-214ENST00000601319 TMEM170BQ5T4T1 132 aa10.47□□□□□ -0.73
HERC3-214ENST00000601319 IGLV5-37A0A075B6J1 123 aa10.46□□□□□ -0.73
HERC3-214ENST00000601319 KRTAP10-8P60410 259 aa10.46□□□□□ -0.73
HERC3-214ENST00000601319 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.73
HERC3-214ENST00000601319 COLCA2A8K830 154 aa10.45□□□□□ -0.74
HERC3-214ENST00000601319 H0Y9J4 135 aa10.45□□□□□ -0.74
HERC3-214ENST00000601319 NUPR1O60356 82 aa10.45□□□□□ -0.74
HERC3-214ENST00000601319 LINC00310P59036 64 aa10.45□□□□□ -0.74
HERC3-214ENST00000601319 COX17Q14061 63 aa10.45□□□□□ -0.74
HERC3-214ENST00000601319 FAM19A2Q8N3H0 131 aa10.44□□□□□ -0.74
HERC3-214ENST00000601319 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
HERC3-214ENST00000601319 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
HERC3-214ENST00000601319 TMEM223A0PJW6 202 aa10.43□□□□□ -0.74
HERC3-214ENST00000601319 SERF1AO75920 110 aa10.43□□□□□ -0.74
HERC3-214ENST00000601319 PFN2P35080 140 aa10.41□□□□□ -0.74
HERC3-214ENST00000601319 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
HERC3-214ENST00000601319 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.74
HERC3-214ENST00000601319 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
HERC3-214ENST00000601319 LINC00167Q96N53 147 aa10.39□□□□□ -0.75
HERC3-214ENST00000601319 ZNF861PO60384 105 aa10.38□□□□□ -0.75
HERC3-214ENST00000601319 BCE1O60756 84 aa10.37□□□□□ -0.75
HERC3-214ENST00000601319 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
HERC3-214ENST00000601319 KRTAP1-4P0C5Y4 121 aa10.36□□□□□ -0.75
HERC3-214ENST00000601319 VPREB1P12018 145 aa10.36□□□□□ -0.75
HERC3-214ENST00000601319 PLNP26678 52 aa10.36□□□□□ -0.75
HERC3-214ENST00000601319 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
HERC3-214ENST00000601319 IGLV1-50A0A075B6I6 118 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms