RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 C6orf226Q5I0X4 101 aa11.65□□□□□ -0.54
SNRPA-205ENST00000598923 LINC00469Q8N7U9 141 aa11.65□□□□□ -0.54
SNRPA-205ENST00000598923 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
SNRPA-205ENST00000598923 RAB5BP61020 215 aa11.64□□□□□ -0.55
SNRPA-205ENST00000598923 PMVKQ15126 192 aa11.64□□□□□ -0.55
SNRPA-205ENST00000598923 CKS1BP61024 79 aa11.63□□□□□ -0.55
SNRPA-205ENST00000598923 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
SNRPA-205ENST00000598923 C9orf116Q5BN46 136 aaPredicted RBP11.63□□□□□ -0.55
SNRPA-205ENST00000598923 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
SNRPA-205ENST00000598923 A0A096LNJ9 63 aa11.62□□□□□ -0.55
SNRPA-205ENST00000598923 TINCRA0A1B0GVN0 87 aa11.62□□□□□ -0.55
SNRPA-205ENST00000598923 HBDP02042 147 aa11.62□□□□□ -0.55
SNRPA-205ENST00000598923 Q6ZRP5 223 aa11.62□□□□□ -0.55
SNRPA-205ENST00000598923 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
SNRPA-205ENST00000598923 HMCN2Q8NDA2 5059 aa11.6□□□□□ -0.55
SNRPA-205ENST00000598923 Q8IZM0 81 aa11.6□□□□□ -0.55
SNRPA-205ENST00000598923 TLX1NBP0CAT3 122 aa11.59□□□□□ -0.55
SNRPA-205ENST00000598923 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
SNRPA-205ENST00000598923 MT1HL1P0DM35 61 aa11.58□□□□□ -0.56
SNRPA-205ENST00000598923 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
SNRPA-205ENST00000598923 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
SNRPA-205ENST00000598923 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
SNRPA-205ENST00000598923 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
SNRPA-205ENST00000598923 PHF5AQ7RTV0 110 aaKnown RBP11.57□□□□□ -0.56
SNRPA-205ENST00000598923 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
SNRPA-205ENST00000598923 NDUFC2-KCTD14E9PQ53 114 aa11.56□□□□□ -0.56
SNRPA-205ENST00000598923 ATP5LO75964 103 aa11.56□□□□□ -0.56
SNRPA-205ENST00000598923 TRGC2P03986 189 aa11.56□□□□□ -0.56
SNRPA-205ENST00000598923 COX7B2Q8TF08 81 aa11.56□□□□□ -0.56
SNRPA-205ENST00000598923 PLA2G2DQ9UNK4 145 aa11.56□□□□□ -0.56
SNRPA-205ENST00000598923 H3BRM9 83 aa11.55□□□□□ -0.56
SNRPA-205ENST00000598923 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
SNRPA-205ENST00000598923 BAGE3Q86Y29 109 aa11.55□□□□□ -0.56
SNRPA-205ENST00000598923 CHCHD1Q96BP2 118 aaKnown RBP11.55□□□□□ -0.56
SNRPA-205ENST00000598923 F8VRH5 84 aa11.53□□□□□ -0.56
SNRPA-205ENST00000598923 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
SNRPA-205ENST00000598923 CXCL5P42830 114 aa11.52□□□□□ -0.57
SNRPA-205ENST00000598923 C9orf129Q5T035 196 aaKnown RBP11.51□□□□□ -0.57
SNRPA-205ENST00000598923 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
SNRPA-205ENST00000598923 COLCA2A8K830 154 aa11.5□□□□□ -0.57
SNRPA-205ENST00000598923 HSBP1O75506 76 aa11.5□□□□□ -0.57
SNRPA-205ENST00000598923 ZNF22P17026 224 aaPredicted RBP11.49□□□□□ -0.57
SNRPA-205ENST00000598923 IFI27L1Q96BM0 104 aa11.49□□□□□ -0.57
SNRPA-205ENST00000598923 XAGE1AQ9HD64 81 aa11.49□□□□□ -0.57
SNRPA-205ENST00000598923 PSORS1C2Q9UIG4 136 aa11.49□□□□□ -0.57
SNRPA-205ENST00000598923 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
SNRPA-205ENST00000598923 C11orf86A6NJI1 115 aa11.48□□□□□ -0.57
SNRPA-205ENST00000598923 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
SNRPA-205ENST00000598923 M0QXV9 152 aa11.47□□□□□ -0.57
SNRPA-205ENST00000598923 C1orf137Q5JT78 98 aa11.47□□□□□ -0.57
SNRPA-205ENST00000598923 KRTAP7-1Q8IUC3 87 aa11.47□□□□□ -0.57
SNRPA-205ENST00000598923 SCO1O75880 301 aa11.46□□□□□ -0.57
SNRPA-205ENST00000598923 UBE2BP63146 152 aa11.46□□□□□ -0.57
SNRPA-205ENST00000598923 SERF1AO75920 110 aa11.45□□□□□ -0.58
SNRPA-205ENST00000598923 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
SNRPA-205ENST00000598923 TNXBP22105 4242 aa11.44□□□□□ -0.58
SNRPA-205ENST00000598923 IGLV5-39A0A0G2JS06 123 aa11.44□□□□□ -0.58
SNRPA-205ENST00000598923 H0Y8G0 127 aa11.44□□□□□ -0.58
SNRPA-205ENST00000598923 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
SNRPA-205ENST00000598923 KRTAP11-1Q8IUC1 163 aa11.44□□□□□ -0.58
SNRPA-205ENST00000598923 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
SNRPA-205ENST00000598923 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNRPA-205ENST00000598923 PFN2P35080 140 aa11.42□□□□□ -0.58
SNRPA-205ENST00000598923 NUPR1O60356 82 aa11.41□□□□□ -0.58
SNRPA-205ENST00000598923 LEPROTL1O95214 131 aa11.41□□□□□ -0.58
SNRPA-205ENST00000598923 LINC00310P59036 64 aa11.41□□□□□ -0.58
SNRPA-205ENST00000598923 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
SNRPA-205ENST00000598923 LINC01600Q96MT4 127 aa11.41□□□□□ -0.58
SNRPA-205ENST00000598923 C22orf24Q9Y442 160 aa11.41□□□□□ -0.58
SNRPA-205ENST00000598923 FABP4P15090 132 aa11.39□□□□□ -0.59
SNRPA-205ENST00000598923 LBHQ53QV2 105 aaPredicted RBP11.38□□□□□ -0.59
SNRPA-205ENST00000598923 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
SNRPA-205ENST00000598923 TMEM223A0PJW6 202 aa11.37□□□□□ -0.59
SNRPA-205ENST00000598923 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
SNRPA-205ENST00000598923 HSPB8Q9UJY1 196 aa11.36□□□□□ -0.59
SNRPA-205ENST00000598923 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
SNRPA-205ENST00000598923 ODF1Q14990 250 aa11.35□□□□□ -0.59
SNRPA-205ENST00000598923 MRPL55Q7Z7F7 128 aaKnown RBP11.34□□□□□ -0.59
SNRPA-205ENST00000598923 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
SNRPA-205ENST00000598923 KRTAP10-8P60410 259 aa11.33□□□□□ -0.6
SNRPA-205ENST00000598923 A0A0U1RRA0 63 aa11.32□□□□□ -0.6
SNRPA-205ENST00000598923 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 LINC00158P58513 81 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 COX17Q14061 63 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
SNRPA-205ENST00000598923 SFTA2Q6UW10 78 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 LINC00167Q96N53 147 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
SNRPA-205ENST00000598923 SND1-IT1Q9HBX3 110 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms