RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 YPEL4Q96NS1 127 aa16.9■□□□□ 0.3
SMAD4-213ENST00000591914 TOMM7Q9P0U1 55 aa16.9■□□□□ 0.3
SMAD4-213ENST00000591914 IGLV5-45A0A087WSX0 123 aa16.88■□□□□ 0.29
SMAD4-213ENST00000591914 A0A096LNJ9 63 aa16.88■□□□□ 0.29
SMAD4-213ENST00000591914 NDUFC2-KCTD14E9PQ53 114 aa16.88■□□□□ 0.29
SMAD4-213ENST00000591914 CKS1BP61024 79 aa16.88■□□□□ 0.29
SMAD4-213ENST00000591914 C6orf226Q5I0X4 101 aa16.88■□□□□ 0.29
SMAD4-213ENST00000591914 LINC00469Q8N7U9 141 aa16.88■□□□□ 0.29
SMAD4-213ENST00000591914 LINC00614P0C842 121 aa16.87■□□□□ 0.29
SMAD4-213ENST00000591914 PMVKQ15126 192 aa16.87■□□□□ 0.29
SMAD4-213ENST00000591914 GAGE2EQ4V326 116 aa16.87■□□□□ 0.29
SMAD4-213ENST00000591914 GAGE2DQ9UEU5 116 aa16.87■□□□□ 0.29
SMAD4-213ENST00000591914 FAM168BA1KXE4 195 aa16.85■□□□□ 0.29
SMAD4-213ENST00000591914 SMIM1B2RUZ4 78 aa16.85■□□□□ 0.29
SMAD4-213ENST00000591914 PHF5AQ7RTV0 110 aaKnown RBP16.85■□□□□ 0.29
SMAD4-213ENST00000591914 MT1HL1P0DM35 61 aa16.83■□□□□ 0.28
SMAD4-213ENST00000591914 PDZD11Q5EBL8 140 aa16.82■□□□□ 0.28
SMAD4-213ENST00000591914 F8VRH5 84 aa16.81■□□□□ 0.28
SMAD4-213ENST00000591914 HBDP02042 147 aa16.81■□□□□ 0.28
SMAD4-213ENST00000591914 SRSF9Q13242 221 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMAD4-213ENST00000591914 SPINK6Q6UWN8 80 aa16.81■□□□□ 0.28
SMAD4-213ENST00000591914 KRTAP7-1Q8IUC3 87 aa16.81■□□□□ 0.28
SMAD4-213ENST00000591914 PSORS1C2Q9UIG4 136 aa16.81■□□□□ 0.28
SMAD4-213ENST00000591914 CXCL5P42830 114 aa16.8■□□□□ 0.28
SMAD4-213ENST00000591914 RAB5BP61020 215 aa16.8■□□□□ 0.28
SMAD4-213ENST00000591914 C9orf129Q5T035 196 aaKnown RBP16.8■□□□□ 0.28
SMAD4-213ENST00000591914 FAM19A5Q7Z5A7 132 aaPredicted RBP16.8■□□□□ 0.28
SMAD4-213ENST00000591914 PMCHL1Q16048 86 aa16.79■□□□□ 0.28
SMAD4-213ENST00000591914 CBLN2Q8IUK8 224 aa16.77■□□□□ 0.28
SMAD4-213ENST00000591914 COX7B2Q8TF08 81 aa16.77■□□□□ 0.28
SMAD4-213ENST00000591914 SPINK8P0C7L1 97 aa16.76■□□□□ 0.27
SMAD4-213ENST00000591914 IGLC3P0DOY3 106 aa16.76■□□□□ 0.27
SMAD4-213ENST00000591914 SERTAD4-AS1Q5TG53 156 aa16.75■□□□□ 0.27
SMAD4-213ENST00000591914 H3BRM9 83 aa16.73■□□□□ 0.27
SMAD4-213ENST00000591914 M0QXV9 152 aa16.73■□□□□ 0.27
SMAD4-213ENST00000591914 ATP5LO75964 103 aa16.73■□□□□ 0.27
SMAD4-213ENST00000591914 NDUFA6P56556 154 aa16.73■□□□□ 0.27
SMAD4-213ENST00000591914 KRTAP11-1Q8IUC1 163 aa16.73■□□□□ 0.27
SMAD4-213ENST00000591914 LINC01600Q96MT4 127 aa16.73■□□□□ 0.27
SMAD4-213ENST00000591914 C1orf137Q5JT78 98 aa16.72■□□□□ 0.27
SMAD4-213ENST00000591914 SLC7A5P1Q8MH63 180 aa16.71■□□□□ 0.27
SMAD4-213ENST00000591914 REG3GQ6UW15 175 aa16.7■□□□□ 0.26
SMAD4-213ENST00000591914 CHCHD1Q96BP2 118 aaKnown RBP16.7■□□□□ 0.26
SMAD4-213ENST00000591914 TNXBP22105 4242 aa16.7■□□□□ 0.26
SMAD4-213ENST00000591914 ZNF22P17026 224 aaPredicted RBP16.69■□□□□ 0.26
SMAD4-213ENST00000591914 XAGE1AQ9HD64 81 aa16.69■□□□□ 0.26
SMAD4-213ENST00000591914 IGLV5-39A0A0G2JS06 123 aa16.68■□□□□ 0.26
SMAD4-213ENST00000591914 BAGE3Q86Y29 109 aa16.67■□□□□ 0.26
SMAD4-213ENST00000591914 HMCN2Q8NDA2 5059 aa16.66■□□□□ 0.26
SMAD4-213ENST00000591914 IGLV7-43P04211 117 aa16.65■□□□□ 0.26
SMAD4-213ENST00000591914 UBE2BP63146 152 aa16.65■□□□□ 0.26
SMAD4-213ENST00000591914 ODF1Q14990 250 aa16.64■□□□□ 0.25
SMAD4-213ENST00000591914 C11orf86A6NJI1 115 aa16.63■□□□□ 0.25
SMAD4-213ENST00000591914 C22orf24Q9Y442 160 aa16.62■□□□□ 0.25
SMAD4-213ENST00000591914 TRGC2P03986 189 aa16.61■□□□□ 0.25
SMAD4-213ENST00000591914 IFI27L1Q96BM0 104 aa16.6■□□□□ 0.25
SMAD4-213ENST00000591914 CHTOPQ9Y3Y2 248 aaKnown RBP16.6■□□□□ 0.25
SMAD4-213ENST00000591914 TRAV12-1A0A0B4J245 112 aa16.59■□□□□ 0.25
SMAD4-213ENST00000591914 KRTAP10-8P60410 259 aa16.58■□□□□ 0.24
SMAD4-213ENST00000591914 TMEM170BQ5T4T1 132 aa16.58■□□□□ 0.24
SMAD4-213ENST00000591914 TP73-AS1Q9UF72 201 aa16.58■□□□□ 0.24
SMAD4-213ENST00000591914 HSBP1O75506 76 aa16.57■□□□□ 0.24
SMAD4-213ENST00000591914 LBHQ53QV2 105 aaPredicted RBP16.57■□□□□ 0.24
SMAD4-213ENST00000591914 DIRC1Q969H9 104 aa16.56■□□□□ 0.24
SMAD4-213ENST00000591914 PLA2G2DQ9UNK4 145 aa16.56■□□□□ 0.24
SMAD4-213ENST00000591914 FAM19A2Q8N3H0 131 aa16.55■□□□□ 0.24
SMAD4-213ENST00000591914 MRPL55Q7Z7F7 128 aaKnown RBP16.54■□□□□ 0.24
SMAD4-213ENST00000591914 COLCA2A8K830 154 aa16.53■□□□□ 0.24
SMAD4-213ENST00000591914 H0Y9J4 135 aa16.52■□□□□ 0.24
SMAD4-213ENST00000591914 LINC00310P59036 64 aa16.52■□□□□ 0.24
SMAD4-213ENST00000591914 PFN2P35080 140 aa16.51■□□□□ 0.23
SMAD4-213ENST00000591914 SFTA2Q6UW10 78 aa16.51■□□□□ 0.23
SMAD4-213ENST00000591914 ERG28Q9UKR5 140 aa16.51■□□□□ 0.23
SMAD4-213ENST00000591914 IGLV5-37A0A075B6J1 123 aa16.5■□□□□ 0.23
SMAD4-213ENST00000591914 SERF1AO75920 110 aa16.5■□□□□ 0.23
SMAD4-213ENST00000591914 TMEM223A0PJW6 202 aa16.49■□□□□ 0.23
SMAD4-213ENST00000591914 NUPR1O60356 82 aa16.49■□□□□ 0.23
SMAD4-213ENST00000591914 COX17Q14061 63 aa16.49■□□□□ 0.23
SMAD4-213ENST00000591914 ZNF625Q96I27 306 aaPredicted RBP16.49■□□□□ 0.23
SMAD4-213ENST00000591914 LINC00167Q96N53 147 aa16.47■□□□□ 0.23
SMAD4-213ENST00000591914 LEPROTL1O95214 131 aa16.45■□□□□ 0.22
SMAD4-213ENST00000591914 SND1-IT1Q9HBX3 110 aa16.45■□□□□ 0.22
SMAD4-213ENST00000591914 ZNF861PO60384 105 aa16.43■□□□□ 0.22
SMAD4-213ENST00000591914 NKAPP1Q8N9T2 125 aa16.43■□□□□ 0.22
SMAD4-213ENST00000591914 RPL37AP8A6NKH3 93 aa16.42■□□□□ 0.22
SMAD4-213ENST00000591914 GAGE10A6NGK3 116 aa16.41■□□□□ 0.22
SMAD4-213ENST00000591914 KRTAP1-4P0C5Y4 121 aa16.41■□□□□ 0.22
SMAD4-213ENST00000591914 H0Y8G0 127 aa16.4■□□□□ 0.22
SMAD4-213ENST00000591914 BCE1O60756 84 aa16.4■□□□□ 0.22
SMAD4-213ENST00000591914 VPREB1P12018 145 aa16.39■□□□□ 0.21
SMAD4-213ENST00000591914 PRR26Q8N8Z3 221 aa16.38■□□□□ 0.21
SMAD4-213ENST00000591914 HSPB8Q9UJY1 196 aa16.38■□□□□ 0.21
SMAD4-213ENST00000591914 SCO1O75880 301 aa16.36■□□□□ 0.21
SMAD4-213ENST00000591914 FABP4P15090 132 aa16.35■□□□□ 0.21
SMAD4-213ENST00000591914 IGLV1-50A0A075B6I6 118 aa16.34■□□□□ 0.21
SMAD4-213ENST00000591914 RPL28P46779 137 aaKnown RBP16.34■□□□□ 0.21
SMAD4-213ENST00000591914 LINC00158P58513 81 aa16.34■□□□□ 0.21
SMAD4-213ENST00000591914 RPL24P83731 157 aaKnown RBP16.34■□□□□ 0.21
SMAD4-213ENST00000591914 Q8NDZ9 215 aa16.34■□□□□ 0.21
SMAD4-213ENST00000591914 PLNP26678 52 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms