RNA–Protein interactions for RNA: ENST00000591736.5

RANBP3-223, Transcript of RAN binding protein 3, human

TSL 4

Gene RANBP3, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-223	ENST00000591736	TRAPPC1	Q9Y5R8	145 aa		11.39	□□□□□ -0.59
RANBP3-223	ENST00000591736	TNXB	P22105	4242 aa		11.39	□□□□□ -0.59
RANBP3-223	ENST00000591736	IGLV5-45	A0A087WSX0	123 aa		11.38	□□□□□ -0.59
RANBP3-223	ENST00000591736	TINCR	A0A1B0GVN0	87 aa		11.38	□□□□□ -0.59
RANBP3-223	ENST00000591736	CST9L	Q9H4G1	147 aa		11.38	□□□□□ -0.59
RANBP3-223	ENST00000591736	HMCN2	Q8NDA2	5059 aa		11.38	□□□□□ -0.59
RANBP3-223	ENST00000591736	GAGE2E	Q4V326	116 aa		11.37	□□□□□ -0.59
RANBP3-223	ENST00000591736	C6orf226	Q5I0X4	101 aa		11.37	□□□□□ -0.59
RANBP3-223	ENST00000591736	PHF5A	Q7RTV0	110 aa	Known RBP	11.37	□□□□□ -0.59
RANBP3-223	ENST00000591736	C18orf32	Q8TCD1	76 aa		11.37	□□□□□ -0.59
RANBP3-223	ENST00000591736	GAGE2D	Q9UEU5	116 aa		11.37	□□□□□ -0.59
RANBP3-223	ENST00000591736	FAM168B	A1KXE4	195 aa		11.36	□□□□□ -0.59
RANBP3-223	ENST00000591736	CKS1B	P61024	79 aa		11.36	□□□□□ -0.59
RANBP3-223	ENST00000591736	PMVK	Q15126	192 aa		11.36	□□□□□ -0.59
RANBP3-223	ENST00000591736	URB1-AS1	Q96HZ7	61 aa		11.36	□□□□□ -0.59
RANBP3-223	ENST00000591736	TOMM7	Q9P0U1	55 aa		11.36	□□□□□ -0.59
RANBP3-223	ENST00000591736	PSORS1C2	Q9UIG4	136 aa		11.36	□□□□□ -0.59
RANBP3-223	ENST00000591736		A0A096LNJ9	63 aa		11.35	□□□□□ -0.59
RANBP3-223	ENST00000591736	SMIM1	B2RUZ4	78 aa		11.35	□□□□□ -0.59
RANBP3-223	ENST00000591736	KRTAP7-1	Q8IUC3	87 aa		11.35	□□□□□ -0.59
RANBP3-223	ENST00000591736	LINC00469	Q8N7U9	141 aa		11.35	□□□□□ -0.59
RANBP3-223	ENST00000591736	LINC01600	Q96MT4	127 aa		11.35	□□□□□ -0.59
RANBP3-223	ENST00000591736	LINC00614	P0C842	121 aa		11.34	□□□□□ -0.59
RANBP3-223	ENST00000591736	PDZD11	Q5EBL8	140 aa		11.34	□□□□□ -0.59
RANBP3-223	ENST00000591736	YPEL4	Q96NS1	127 aa		11.34	□□□□□ -0.59
RANBP3-223	ENST00000591736		F8VRH5	84 aa		11.33	□□□□□ -0.6
RANBP3-223	ENST00000591736	CXCL5	P42830	114 aa		11.33	□□□□□ -0.6
RANBP3-223	ENST00000591736	C9orf129	Q5T035	196 aa	Known RBP	11.33	□□□□□ -0.6
RANBP3-223	ENST00000591736	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.32	□□□□□ -0.6
RANBP3-223	ENST00000591736	REG3G	Q6UW15	175 aa		11.31	□□□□□ -0.6
RANBP3-223	ENST00000591736	HBD	P02042	147 aa		11.3	□□□□□ -0.6
RANBP3-223	ENST00000591736	RAB5B	P61020	215 aa		11.3	□□□□□ -0.6
RANBP3-223	ENST00000591736	ODF1	Q14990	250 aa		11.3	□□□□□ -0.6
RANBP3-223	ENST00000591736	COX7B2	Q8TF08	81 aa		11.3	□□□□□ -0.6
RANBP3-223	ENST00000591736	IGLC3	P0DOY3	106 aa		11.29	□□□□□ -0.6
RANBP3-223	ENST00000591736	C1orf137	Q5JT78	98 aa		11.29	□□□□□ -0.6
RANBP3-223	ENST00000591736	KRTAP11-1	Q8IUC1	163 aa		11.29	□□□□□ -0.6
RANBP3-223	ENST00000591736		M0QXV9	152 aa		11.28	□□□□□ -0.6
RANBP3-223	ENST00000591736		H3BRM9	83 aa		11.26	□□□□□ -0.61
RANBP3-223	ENST00000591736	IGLV7-43	P04211	117 aa		11.26	□□□□□ -0.61
RANBP3-223	ENST00000591736	SPINK8	P0C7L1	97 aa		11.26	□□□□□ -0.61
RANBP3-223	ENST00000591736	KRTAP10-8	P60410	259 aa		11.26	□□□□□ -0.61
RANBP3-223	ENST00000591736	PMCHL1	Q16048	86 aa		11.26	□□□□□ -0.61
RANBP3-223	ENST00000591736	ATP5L	O75964	103 aa		11.25	□□□□□ -0.61
RANBP3-223	ENST00000591736	IGLV5-39	A0A0G2JS06	123 aa		11.24	□□□□□ -0.61
RANBP3-223	ENST00000591736	XAGE1A	Q9HD64	81 aa		11.24	□□□□□ -0.61
RANBP3-223	ENST00000591736	PLA2G2D	Q9UNK4	145 aa		11.24	□□□□□ -0.61
RANBP3-223	ENST00000591736	ZNF22	P17026	224 aa	Predicted RBP	11.23	□□□□□ -0.61
RANBP3-223	ENST00000591736	NDUFA6	P56556	154 aa		11.23	□□□□□ -0.61
RANBP3-223	ENST00000591736	CHCHD1	Q96BP2	118 aa	Known RBP	11.23	□□□□□ -0.61
RANBP3-223	ENST00000591736	UBE2B	P63146	152 aa		11.22	□□□□□ -0.61
RANBP3-223	ENST00000591736	C22orf24	Q9Y442	160 aa		11.22	□□□□□ -0.61
RANBP3-223	ENST00000591736	CBLN2	Q8IUK8	224 aa		11.21	□□□□□ -0.61
RANBP3-223	ENST00000591736	DIRC1	Q969H9	104 aa		11.21	□□□□□ -0.61
RANBP3-223	ENST00000591736	TP73-AS1	Q9UF72	201 aa		11.21	□□□□□ -0.61
RANBP3-223	ENST00000591736	BAGE3	Q86Y29	109 aa		11.2	□□□□□ -0.62
RANBP3-223	ENST00000591736	LBH	Q53QV2	105 aa	Predicted RBP	11.19	□□□□□ -0.62
RANBP3-223	ENST00000591736	C11orf86	A6NJI1	115 aa		11.18	□□□□□ -0.62
RANBP3-223	ENST00000591736	TRAV12-1	A0A0B4J245	112 aa		11.17	□□□□□ -0.62
RANBP3-223	ENST00000591736		H0Y9J4	135 aa		11.17	□□□□□ -0.62
RANBP3-223	ENST00000591736	NUPR1	O60356	82 aa		11.16	□□□□□ -0.62
RANBP3-223	ENST00000591736	MRPL55	Q7Z7F7	128 aa	Known RBP	11.16	□□□□□ -0.62
RANBP3-223	ENST00000591736	IGLV5-37	A0A075B6J1	123 aa		11.15	□□□□□ -0.62
RANBP3-223	ENST00000591736	SLC7A5P1	Q8MH63	180 aa		11.15	□□□□□ -0.62
RANBP3-223	ENST00000591736	IFI27L1	Q96BM0	104 aa		11.15	□□□□□ -0.62
RANBP3-223	ENST00000591736	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.15	□□□□□ -0.62
RANBP3-223	ENST00000591736	SFTA2	Q6UW10	78 aa		11.14	□□□□□ -0.63
RANBP3-223	ENST00000591736	TRGC2	P03986	189 aa		11.13	□□□□□ -0.63
RANBP3-223	ENST00000591736	TMEM170B	Q5T4T1	132 aa		11.13	□□□□□ -0.63
RANBP3-223	ENST00000591736	COX17	Q14061	63 aa		11.12	□□□□□ -0.63
RANBP3-223	ENST00000591736	ZNF861P	O60384	105 aa		11.11	□□□□□ -0.63
RANBP3-223	ENST00000591736	HSBP1	O75506	76 aa		11.11	□□□□□ -0.63
RANBP3-223	ENST00000591736	ZNF625	Q96I27	306 aa	Predicted RBP	11.11	□□□□□ -0.63
RANBP3-223	ENST00000591736	LINC00167	Q96N53	147 aa		11.11	□□□□□ -0.63
RANBP3-223	ENST00000591736	ERG28	Q9UKR5	140 aa		11.11	□□□□□ -0.63
RANBP3-223	ENST00000591736	TMEM223	A0PJW6	202 aa		11.1	□□□□□ -0.63
RANBP3-223	ENST00000591736	KRTAP1-4	P0C5Y4	121 aa		11.1	□□□□□ -0.63
RANBP3-223	ENST00000591736	PFN2	P35080	140 aa		11.1	□□□□□ -0.63
RANBP3-223	ENST00000591736	LINC00310	P59036	64 aa		11.09	□□□□□ -0.63
RANBP3-223	ENST00000591736	FAM19A2	Q8N3H0	131 aa		11.09	□□□□□ -0.63
RANBP3-223	ENST00000591736	COLCA2	A8K830	154 aa		11.08	□□□□□ -0.64
RANBP3-223	ENST00000591736	BCE1	O60756	84 aa		11.08	□□□□□ -0.64
RANBP3-223	ENST00000591736	SND1-IT1	Q9HBX3	110 aa		11.08	□□□□□ -0.64
RANBP3-223	ENST00000591736	UBR4	Q5T4S7	5183 aa		11.07	□□□□□ -0.64
RANBP3-223	ENST00000591736	IGLV1-50	A0A075B6I6	118 aa		11.07	□□□□□ -0.64
RANBP3-223	ENST00000591736	PRR26	Q8N8Z3	221 aa		11.07	□□□□□ -0.64
RANBP3-223	ENST00000591736	NKAPP1	Q8N9T2	125 aa		11.07	□□□□□ -0.64
RANBP3-223	ENST00000591736	RPL37AP8	A6NKH3	93 aa		11.06	□□□□□ -0.64
RANBP3-223	ENST00000591736	SERF1A	O75920	110 aa		11.06	□□□□□ -0.64
RANBP3-223	ENST00000591736	VPREB1	P12018	145 aa		11.05	□□□□□ -0.64
RANBP3-223	ENST00000591736	GAGE10	A6NGK3	116 aa		11.04	□□□□□ -0.64
RANBP3-223	ENST00000591736	LEPROTL1	O95214	131 aa		11.04	□□□□□ -0.64
RANBP3-223	ENST00000591736	RPL28	P46779	137 aa	Known RBP	11.04	□□□□□ -0.64
RANBP3-223	ENST00000591736	LRP2	P98164	4655 aa		11.03	□□□□□ -0.64
RANBP3-223	ENST00000591736	RPL24	P83731	157 aa	Known RBP	11.02	□□□□□ -0.65
RANBP3-223	ENST00000591736	SCO1	O75880	301 aa		11.01	□□□□□ -0.65
RANBP3-223	ENST00000591736	KRTAP13-1	Q8IUC0	172 aa		11.01	□□□□□ -0.65
RANBP3-223	ENST00000591736	RPL13A	P40429	203 aa	Known RBP	11	□□□□□ -0.65
RANBP3-223	ENST00000591736		Q8NDZ9	215 aa		11	□□□□□ -0.65
RANBP3-223	ENST00000591736	HSPB8	Q9UJY1	196 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms