RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 HSPB8Q9UJY1 196 aa13.78□□□□□ -0.2
R3HDM4-206ENST00000590454 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.77□□□□□ -0.21
R3HDM4-206ENST00000590454 CARD19Q96LW7 228 aa13.77□□□□□ -0.21
R3HDM4-206ENST00000590454 CAMK2N2Q96S95 79 aa13.77□□□□□ -0.21
R3HDM4-206ENST00000590454 ODF1Q14990 250 aa13.76□□□□□ -0.21
R3HDM4-206ENST00000590454 C10orf25Q5T742 122 aa13.76□□□□□ -0.21
R3HDM4-206ENST00000590454 C2orf48Q96LS8 159 aa13.76□□□□□ -0.21
R3HDM4-206ENST00000590454 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
R3HDM4-206ENST00000590454 UNQ6190/PRO20217Q6UXQ8 127 aa13.75□□□□□ -0.21
R3HDM4-206ENST00000590454 PACRGQ96M98 296 aaPredicted RBP13.75□□□□□ -0.21
R3HDM4-206ENST00000590454 TOMM7Q9P0U1 55 aa13.75□□□□□ -0.21
R3HDM4-206ENST00000590454 PANO1I0J062 215 aa13.74□□□□□ -0.21
R3HDM4-206ENST00000590454 Q6ZSA8 131 aa13.74□□□□□ -0.21
R3HDM4-206ENST00000590454 F8VRH5 84 aa13.73□□□□□ -0.21
R3HDM4-206ENST00000590454 PMCHL2Q9BQD1 86 aa13.72□□□□□ -0.21
R3HDM4-206ENST00000590454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.72□□□□□ -0.21
R3HDM4-206ENST00000590454 UBR4Q5T4S7 5183 aa13.72□□□□□ -0.21
R3HDM4-206ENST00000590454 H3BRM9 83 aa13.71□□□□□ -0.21
R3HDM4-206ENST00000590454 CHTF8P0CG12 524 aa13.71□□□□□ -0.21
R3HDM4-206ENST00000590454 TMEM170BQ5T4T1 132 aa13.71□□□□□ -0.21
R3HDM4-206ENST00000590454 NDUFA1O15239 70 aa13.7□□□□□ -0.22
R3HDM4-206ENST00000590454 Q8IZM0 81 aa13.7□□□□□ -0.22
R3HDM4-206ENST00000590454 LINC00528Q8N1L1 170 aa13.7□□□□□ -0.22
R3HDM4-206ENST00000590454 MAP1LC3CQ9BXW4 147 aa13.7□□□□□ -0.22
R3HDM4-206ENST00000590454 C6orf48Q9UBA6 75 aa13.7□□□□□ -0.22
R3HDM4-206ENST00000590454 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
R3HDM4-206ENST00000590454 PRSS2P07478 247 aa13.69□□□□□ -0.22
R3HDM4-206ENST00000590454 C6orf226Q5I0X4 101 aa13.69□□□□□ -0.22
R3HDM4-206ENST00000590454 COX7B2Q8TF08 81 aa13.68□□□□□ -0.22
R3HDM4-206ENST00000590454 A0A096LNI7 61 aa13.67□□□□□ -0.22
R3HDM4-206ENST00000590454 F8WDY8 70 aa13.67□□□□□ -0.22
R3HDM4-206ENST00000590454 SYS1-DBNDD2H3BUS1 97 aa13.67□□□□□ -0.22
R3HDM4-206ENST00000590454 HIST3H2BBQ8N257 126 aa13.67□□□□□ -0.22
R3HDM4-206ENST00000590454 PLA2G2DQ9UNK4 145 aa13.67□□□□□ -0.22
R3HDM4-206ENST00000590454 HMCN2Q8NDA2 5059 aa13.67□□□□□ -0.22
R3HDM4-206ENST00000590454 TMEM223A0PJW6 202 aa13.66□□□□□ -0.22
R3HDM4-206ENST00000590454 C3orf79P0CE67 100 aa13.66□□□□□ -0.22
R3HDM4-206ENST00000590454 C9orf116Q5BN46 136 aaPredicted RBP13.66□□□□□ -0.22
R3HDM4-206ENST00000590454 CKS1BP61024 79 aa13.65□□□□□ -0.22
R3HDM4-206ENST00000590454 RNF151Q2KHN1 245 aa13.65□□□□□ -0.22
R3HDM4-206ENST00000590454 SCXQ7RTU7 201 aa13.65□□□□□ -0.22
R3HDM4-206ENST00000590454 IGKV2-24A0A0C4DH68 120 aa13.64□□□□□ -0.23
R3HDM4-206ENST00000590454 DPM2O94777 84 aa13.63□□□□□ -0.23
R3HDM4-206ENST00000590454 OXTP01178 125 aa13.63□□□□□ -0.23
R3HDM4-206ENST00000590454 CIRBPQ14011 172 aaKnown RBP13.63□□□□□ -0.23
R3HDM4-206ENST00000590454 CIRBP-AS1Q8TBR5 109 aa13.63□□□□□ -0.23
R3HDM4-206ENST00000590454 LOC107984640A0A0U1RRK4 108 aa13.62□□□□□ -0.23
R3HDM4-206ENST00000590454 S100A6P06703 90 aa13.62□□□□□ -0.23
R3HDM4-206ENST00000590454 PLNP26678 52 aa13.62□□□□□ -0.23
R3HDM4-206ENST00000590454 KRTDAPP60985 99 aa13.62□□□□□ -0.23
R3HDM4-206ENST00000590454 SNRPEP62304 92 aaKnown RBP13.62□□□□□ -0.23
R3HDM4-206ENST00000590454 SPACA4Q8TDM5 124 aa13.62□□□□□ -0.23
R3HDM4-206ENST00000590454 TRBV30A0A0K0K1B3 111 aa13.61□□□□□ -0.23
R3HDM4-206ENST00000590454 IGKCP01834 107 aa13.61□□□□□ -0.23
R3HDM4-206ENST00000590454 GAGE2BQ13066 116 aa13.61□□□□□ -0.23
R3HDM4-206ENST00000590454 LINC01545Q5VT33 79 aa13.61□□□□□ -0.23
R3HDM4-206ENST00000590454 HIST1H2BLQ99880 126 aa13.61□□□□□ -0.23
R3HDM4-206ENST00000590454 PTTG1IPP53801 180 aa13.6□□□□□ -0.23
R3HDM4-206ENST00000590454 RPL18AQ02543 176 aaKnown RBP13.6□□□□□ -0.23
R3HDM4-206ENST00000590454 PET117Q6UWS5 81 aa13.6□□□□□ -0.23
R3HDM4-206ENST00000590454 CXCL5P42830 114 aa13.59□□□□□ -0.23
R3HDM4-206ENST00000590454 MAJINQ3KP22 176 aa13.59□□□□□ -0.23
R3HDM4-206ENST00000590454 Q6ZRP5 223 aa13.59□□□□□ -0.23
R3HDM4-206ENST00000590454 C5orf52A6NGY3 159 aa13.58□□□□□ -0.24
R3HDM4-206ENST00000590454 A0A087WYN8 130 aa13.57□□□□□ -0.24
R3HDM4-206ENST00000590454 TLX1NBP0CAT3 122 aa13.57□□□□□ -0.24
R3HDM4-206ENST00000590454 S100A2P29034 98 aa13.57□□□□□ -0.24
R3HDM4-206ENST00000590454 DPH3Q96FX2 82 aa13.57□□□□□ -0.24
R3HDM4-206ENST00000590454 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
R3HDM4-206ENST00000590454 GAGE2EQ4V326 116 aa13.55□□□□□ -0.24
R3HDM4-206ENST00000590454 GAGE2DQ9UEU5 116 aa13.55□□□□□ -0.24
R3HDM4-206ENST00000590454 STPG4Q8N801 248 aa13.54□□□□□ -0.24
R3HDM4-206ENST00000590454 ZNF625Q96I27 306 aaPredicted RBP13.54□□□□□ -0.24
R3HDM4-206ENST00000590454 PKIGQ9Y2B9 76 aa13.54□□□□□ -0.24
R3HDM4-206ENST00000590454 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
R3HDM4-206ENST00000590454 NDUFC2-KCTD14E9PQ53 114 aa13.53□□□□□ -0.24
R3HDM4-206ENST00000590454 KRTAP10-4P60372 401 aaPredicted RBP13.53□□□□□ -0.24
R3HDM4-206ENST00000590454 A0A1W2PNN7 141 aa13.52□□□□□ -0.25
R3HDM4-206ENST00000590454 PLAC8Q9NZF1 115 aa13.52□□□□□ -0.25
R3HDM4-206ENST00000590454 LEPROTO15243 131 aa13.51□□□□□ -0.25
R3HDM4-206ENST00000590454 LINC00474Q9P2X8 69 aa13.51□□□□□ -0.25
R3HDM4-206ENST00000590454 FAM168BA1KXE4 195 aa13.5□□□□□ -0.25
R3HDM4-206ENST00000590454 C9orf129Q5T035 196 aaKnown RBP13.5□□□□□ -0.25
R3HDM4-206ENST00000590454 HERVK_113P61574 105 aa13.49□□□□□ -0.25
R3HDM4-206ENST00000590454 ATOH7Q8N100 152 aa13.49□□□□□ -0.25
R3HDM4-206ENST00000590454 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
R3HDM4-206ENST00000590454 PFN2P35080 140 aa13.48□□□□□ -0.25
R3HDM4-206ENST00000590454 XAGE1AQ9HD64 81 aa13.48□□□□□ -0.25
R3HDM4-206ENST00000590454 J3QQQ9 107 aa13.47□□□□□ -0.25
R3HDM4-206ENST00000590454 KRTAP7-1Q8IUC3 87 aa13.47□□□□□ -0.25
R3HDM4-206ENST00000590454 PLEKHB2Q96CS7 222 aa13.47□□□□□ -0.25
R3HDM4-206ENST00000590454 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
R3HDM4-206ENST00000590454 ERG28Q9UKR5 140 aa13.47□□□□□ -0.25
R3HDM4-206ENST00000590454 C20orf202A1L168 122 aa13.46□□□□□ -0.25
R3HDM4-206ENST00000590454 E9PLD3 99 aa13.46□□□□□ -0.25
R3HDM4-206ENST00000590454 FAT3Q8TDW7 4589 aa13.45□□□□□ -0.26
R3HDM4-206ENST00000590454 IGKV2D-26A0A0A0MRZ7 120 aa13.44□□□□□ -0.26
R3HDM4-206ENST00000590454 A0A0U1RRA0 63 aa13.43□□□□□ -0.26
R3HDM4-206ENST00000590454 LGALS3P17931 250 aaKnown RBP13.42□□□□□ -0.26
R3HDM4-206ENST00000590454 SFTA2Q6UW10 78 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms