RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 CT83Q5H943 113 aa7.1□□□□□ -1.27
NEDD4L-227ENST00000590020 DAND5Q8N907 189 aa7.1□□□□□ -1.27
NEDD4L-227ENST00000590020 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
NEDD4L-227ENST00000590020 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.27
NEDD4L-227ENST00000590020 FAM19A1Q7Z5A9 133 aa7.09□□□□□ -1.27
NEDD4L-227ENST00000590020 C20orf78Q9BR46 151 aa7.09□□□□□ -1.27
NEDD4L-227ENST00000590020 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.27
NEDD4L-227ENST00000590020 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
NEDD4L-227ENST00000590020 TNFRSF6BO95407 300 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 IFI27P40305 119 aaPredicted RBP7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 CEBPGP53567 150 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 RIGQ13278 110 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 FAM104BQ5XKR9 115 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 Q6ZN92 141 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 Q8IZM0 81 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 PLEKHB2Q96CS7 222 aa7.08□□□□□ -1.28
NEDD4L-227ENST00000590020 TMEM238C9JI98 176 aa7.07□□□□□ -1.28
NEDD4L-227ENST00000590020 CKS2P33552 79 aa7.07□□□□□ -1.28
NEDD4L-227ENST00000590020 LINC01561Q8N1V8 128 aa7.07□□□□□ -1.28
NEDD4L-227ENST00000590020 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
NEDD4L-227ENST00000590020 TRBV24-1A0A075B6N3 115 aa7.06□□□□□ -1.28
NEDD4L-227ENST00000590020 F8VRH5 84 aa7.06□□□□□ -1.28
NEDD4L-227ENST00000590020 Q8NBF4 154 aa7.06□□□□□ -1.28
NEDD4L-227ENST00000590020 TMEM141Q96I45 108 aa7.06□□□□□ -1.28
NEDD4L-227ENST00000590020 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
NEDD4L-227ENST00000590020 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
NEDD4L-227ENST00000590020 HMSDA8MTL9 139 aa7.05□□□□□ -1.28
NEDD4L-227ENST00000590020 M0R2T5 61 aa7.05□□□□□ -1.28
NEDD4L-227ENST00000590020 NPYP01303 97 aa7.05□□□□□ -1.28
NEDD4L-227ENST00000590020 TEX43Q6ZNM6 134 aa7.05□□□□□ -1.28
NEDD4L-227ENST00000590020 EIF5A2Q9GZV4 153 aaKnown RBP7.05□□□□□ -1.28
NEDD4L-227ENST00000590020 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
NEDD4L-227ENST00000590020 D6R8Y8 96 aa7.04□□□□□ -1.28
NEDD4L-227ENST00000590020 RAB5BP61020 215 aa7.04□□□□□ -1.28
NEDD4L-227ENST00000590020 CBLN2Q8IUK8 224 aa7.04□□□□□ -1.28
NEDD4L-227ENST00000590020 BATF3Q9NR55 127 aa7.04□□□□□ -1.28
NEDD4L-227ENST00000590020 LINC00862A6NCI5 91 aa7.03□□□□□ -1.28
NEDD4L-227ENST00000590020 HIGD2AQ9BW72 106 aa7.03□□□□□ -1.28
NEDD4L-227ENST00000590020 TMEM126AQ9H061 195 aa7.03□□□□□ -1.28
NEDD4L-227ENST00000590020 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
NEDD4L-227ENST00000590020 A0A1B0GVG6 124 aa7.02□□□□□ -1.29
NEDD4L-227ENST00000590020 LINC01551Q86U37 167 aa7.02□□□□□ -1.29
NEDD4L-227ENST00000590020 C2orf88Q9BSF0 95 aa7.02□□□□□ -1.29
NEDD4L-227ENST00000590020 CDKN2A-AS1Q9UH64 79 aa7.02□□□□□ -1.29
NEDD4L-227ENST00000590020 V9GYV3 84 aa7.02□□□□□ -1.29
NEDD4L-227ENST00000590020 IGLV8-61A0A075B6I0 122 aa7.01□□□□□ -1.29
NEDD4L-227ENST00000590020 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
NEDD4L-227ENST00000590020 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
NEDD4L-227ENST00000590020 SPRR4Q96PI1 79 aa7.01□□□□□ -1.29
NEDD4L-227ENST00000590020 OSTCQ9NRP0 149 aa7.01□□□□□ -1.29
NEDD4L-227ENST00000590020 TMEM250H0YL14 139 aa7□□□□□ -1.29
NEDD4L-227ENST00000590020 M0R378 163 aa7□□□□□ -1.29
NEDD4L-227ENST00000590020 RAB5AP20339 215 aa7□□□□□ -1.29
NEDD4L-227ENST00000590020 SSPOA2VEC9 5147 aa7□□□□□ -1.29
NEDD4L-227ENST00000590020 SPINK1P00995 79 aa6.99□□□□□ -1.29
NEDD4L-227ENST00000590020 AMELXQ99217 191 aa6.99□□□□□ -1.29
NEDD4L-227ENST00000590020 SMIM7Q9BQ49 75 aa6.99□□□□□ -1.29
NEDD4L-227ENST00000590020 NAT8BQ9UHF3 227 aa6.99□□□□□ -1.29
NEDD4L-227ENST00000590020 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
NEDD4L-227ENST00000590020 USH2AO75445 5202 aa6.99□□□□□ -1.29
NEDD4L-227ENST00000590020 Q8N377 158 aa6.98□□□□□ -1.29
NEDD4L-227ENST00000590020 VCX2Q9H322 139 aa6.98□□□□□ -1.29
NEDD4L-227ENST00000590020 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
NEDD4L-227ENST00000590020 CXCL5P42830 114 aa6.97□□□□□ -1.29
NEDD4L-227ENST00000590020 FAM74A3Q4VXF1 159 aa6.97□□□□□ -1.29
NEDD4L-227ENST00000590020 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
NEDD4L-227ENST00000590020 LOC389332A0A1B0GUA5 103 aa6.96□□□□□ -1.3
NEDD4L-227ENST00000590020 MRPL54Q6P161 138 aaKnown RBP6.96□□□□□ -1.3
NEDD4L-227ENST00000590020 FAM19A3Q7Z5A8 133 aa6.96□□□□□ -1.3
NEDD4L-227ENST00000590020 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
NEDD4L-227ENST00000590020 GNB1LQ9BYB4 327 aa6.96□□□□□ -1.3
NEDD4L-227ENST00000590020 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
NEDD4L-227ENST00000590020 HERVK_113P63121 156 aa6.95□□□□□ -1.3
NEDD4L-227ENST00000590020 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
NEDD4L-227ENST00000590020 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
NEDD4L-227ENST00000590020 VPREB1P12018 145 aa6.94□□□□□ -1.3
NEDD4L-227ENST00000590020 Q8NDZ9 215 aa6.94□□□□□ -1.3
NEDD4L-227ENST00000590020 CYSLTR1Q9Y271 337 aa6.94□□□□□ -1.3
NEDD4L-227ENST00000590020 PFN2P35080 140 aa6.93□□□□□ -1.3
NEDD4L-227ENST00000590020 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
NEDD4L-227ENST00000590020 SMIM27A0A1W2PRY6 76 aa6.92□□□□□ -1.3
NEDD4L-227ENST00000590020 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
NEDD4L-227ENST00000590020 TMEM136Q6ZRR5 245 aa6.92□□□□□ -1.3
NEDD4L-227ENST00000590020 ORMDL3Q8N138 153 aa6.92□□□□□ -1.3
NEDD4L-227ENST00000590020 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
NEDD4L-227ENST00000590020 A0A1B0GW15 77 aa6.91□□□□□ -1.3
NEDD4L-227ENST00000590020 F8W036 122 aa6.91□□□□□ -1.3
NEDD4L-227ENST00000590020 PPBPP02775 128 aa6.91□□□□□ -1.3
NEDD4L-227ENST00000590020 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
NEDD4L-227ENST00000590020 RAB14P61106 215 aa6.91□□□□□ -1.3
NEDD4L-227ENST00000590020 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
NEDD4L-227ENST00000590020 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 IGLV9-49A0A0B4J1Y8 123 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 SLC25A20O43772 301 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 GHRHP01286 108 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 SEC11AP67812 179 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 MOBPQ13875 183 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 COX6B2Q6YFQ2 88 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms