RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
PTPN2-208ENST00000589216 FAM168BA1KXE4 195 aa6.14□□□□□ -1.43
PTPN2-208ENST00000589216 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
PTPN2-208ENST00000589216 HERVK_113P63121 156 aa6.14□□□□□ -1.43
PTPN2-208ENST00000589216 LINC01561Q8N1V8 128 aa6.14□□□□□ -1.43
PTPN2-208ENST00000589216 C7orf33Q8WU49 177 aa6.14□□□□□ -1.43
PTPN2-208ENST00000589216 TOMM7Q9P0U1 55 aa6.14□□□□□ -1.43
PTPN2-208ENST00000589216 PAPPA-AS1Q5QFB9 102 aa6.13□□□□□ -1.43
PTPN2-208ENST00000589216 KRTAP7-1Q8IUC3 87 aa6.13□□□□□ -1.43
PTPN2-208ENST00000589216 LINC00469Q8N7U9 141 aa6.13□□□□□ -1.43
PTPN2-208ENST00000589216 IGLV5-45A0A087WSX0 123 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 F8WDY8 70 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 TLX1NBP0CAT3 122 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 G0S2P27469 103 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
PTPN2-208ENST00000589216 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 Q8IZM0 81 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
PTPN2-208ENST00000589216 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
PTPN2-208ENST00000589216 TRBV30A0A0K0K1B3 111 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 TINCRA0A1B0GVN0 87 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 HBDP02042 147 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 LINC00614P0C842 121 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 SEC11AP67812 179 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 PMVKQ15126 192 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 PDZD11Q5EBL8 140 aa6.11□□□□□ -1.43
PTPN2-208ENST00000589216 FAM19A5Q7Z5A7 132 aaPredicted RBP6.11□□□□□ -1.43
PTPN2-208ENST00000589216 PACRGQ96M98 296 aaPredicted RBP6.11□□□□□ -1.43
PTPN2-208ENST00000589216 PRSS2P07478 247 aa6.1□□□□□ -1.43
PTPN2-208ENST00000589216 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
PTPN2-208ENST00000589216 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
PTPN2-208ENST00000589216 NDUFC2-KCTD14E9PQ53 114 aa6.09□□□□□ -1.43
PTPN2-208ENST00000589216 OXTP01178 125 aa6.09□□□□□ -1.43
PTPN2-208ENST00000589216 IGLC3P0DOY3 106 aa6.09□□□□□ -1.43
PTPN2-208ENST00000589216 ZNF22P17026 224 aaPredicted RBP6.09□□□□□ -1.43
PTPN2-208ENST00000589216 LINC00310P59036 64 aa6.09□□□□□ -1.43
PTPN2-208ENST00000589216 F8VRH5 84 aa6.08□□□□□ -1.44
PTPN2-208ENST00000589216 NDUFA6P56556 154 aa6.08□□□□□ -1.44
PTPN2-208ENST00000589216 CKS1BP61024 79 aa6.08□□□□□ -1.44
PTPN2-208ENST00000589216 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
PTPN2-208ENST00000589216 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
PTPN2-208ENST00000589216 PSORS1C2Q9UIG4 136 aa6.08□□□□□ -1.44
PTPN2-208ENST00000589216 IGLV5-39A0A0G2JS06 123 aa6.07□□□□□ -1.44
PTPN2-208ENST00000589216 C11orf86A6NJI1 115 aa6.07□□□□□ -1.44
PTPN2-208ENST00000589216 M0QXV9 152 aa6.07□□□□□ -1.44
PTPN2-208ENST00000589216 TRGC2P03986 189 aa6.07□□□□□ -1.44
PTPN2-208ENST00000589216 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
PTPN2-208ENST00000589216 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
PTPN2-208ENST00000589216 ODF1Q14990 250 aa6.06□□□□□ -1.44
PTPN2-208ENST00000589216 HMCN2Q8NDA2 5059 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 SCO1O75880 301 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 ATP5LO75964 103 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 CXCL5P42830 114 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 RAB5BP61020 215 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 SRSF9Q13242 221 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTPN2-208ENST00000589216 BAGE3Q86Y29 109 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 FAM19A2Q8N3H0 131 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
PTPN2-208ENST00000589216 TNXBP22105 4242 aa6.05□□□□□ -1.44
PTPN2-208ENST00000589216 COLCA2A8K830 154 aa6.04□□□□□ -1.44
PTPN2-208ENST00000589216 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
PTPN2-208ENST00000589216 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
PTPN2-208ENST00000589216 H3BRM9 83 aa6.03□□□□□ -1.44
PTPN2-208ENST00000589216 NUPR1O60356 82 aa6.03□□□□□ -1.44
PTPN2-208ENST00000589216 SERF1AO75920 110 aa6.03□□□□□ -1.44
PTPN2-208ENST00000589216 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
PTPN2-208ENST00000589216 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
PTPN2-208ENST00000589216 HSBP1O75506 76 aa6.02□□□□□ -1.45
PTPN2-208ENST00000589216 TMEM170BQ5T4T1 132 aa6.02□□□□□ -1.45
PTPN2-208ENST00000589216 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
PTPN2-208ENST00000589216 CHTOPQ9Y3Y2 248 aaKnown RBP6.02□□□□□ -1.45
PTPN2-208ENST00000589216 TRAV12-1A0A0B4J245 112 aa6.01□□□□□ -1.45
PTPN2-208ENST00000589216 IGLV7-43P04211 117 aa6.01□□□□□ -1.45
PTPN2-208ENST00000589216 UBE2BP63146 152 aa6.01□□□□□ -1.45
PTPN2-208ENST00000589216 LINC01600Q96MT4 127 aa6.01□□□□□ -1.45
PTPN2-208ENST00000589216 Q8NDZ9 215 aa6□□□□□ -1.45
PTPN2-208ENST00000589216 ZNF625Q96I27 306 aaPredicted RBP6□□□□□ -1.45
PTPN2-208ENST00000589216 C22orf24Q9Y442 160 aa6□□□□□ -1.45
PTPN2-208ENST00000589216 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
PTPN2-208ENST00000589216 TMEM223A0PJW6 202 aa5.99□□□□□ -1.45
PTPN2-208ENST00000589216 H0Y8G0 127 aa5.99□□□□□ -1.45
PTPN2-208ENST00000589216 PFN2P35080 140 aa5.99□□□□□ -1.45
PTPN2-208ENST00000589216 ERG28Q9UKR5 140 aa5.99□□□□□ -1.45
PTPN2-208ENST00000589216 GAGE10A6NGK3 116 aa5.98□□□□□ -1.45
PTPN2-208ENST00000589216 REG3GQ6UW15 175 aa5.98□□□□□ -1.45
PTPN2-208ENST00000589216 MRPL55Q7Z7F7 128 aaKnown RBP5.98□□□□□ -1.45
PTPN2-208ENST00000589216 IGLV5-37A0A075B6J1 123 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 H0Y9J4 135 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 LEPROTL1O95214 131 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 FABP4P15090 132 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 PMCHL2Q9BQD1 86 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 TP73-AS1Q9UF72 201 aa5.97□□□□□ -1.45
PTPN2-208ENST00000589216 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.46
PTPN2-208ENST00000589216 HIST1H2BKO60814 126 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms