RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
SDF2-205ENST00000587629 NAT8BQ9UHF3 227 aa3.89□□□□□ -1.79
SDF2-205ENST00000587629 TRAV9-1A0A075B6T8 112 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 IFITM10A6NMD0 228 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 TSTD3H0UI37 97 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 NDUFA1O15239 70 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 TNFRSF6BO95407 300 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 RPL23P62829 140 aaKnown RBP3.88□□□□□ -1.79
SDF2-205ENST00000587629 ADIRFQ15847 76 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 RNF151Q2KHN1 245 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 COX19Q49B96 90 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
SDF2-205ENST00000587629 C20orf78Q9BR46 151 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 MRPL35Q9NZE8 188 aaKnown RBP3.88□□□□□ -1.79
SDF2-205ENST00000587629 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
SDF2-205ENST00000587629 SMIM27A0A1W2PRY6 76 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 D6R8Y8 96 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 H0Y9J4 135 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 NDUFA6P56556 154 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 LINC00310P59036 64 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 UBE2BP63146 152 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 HBBP68871 147 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 PRR4Q16378 134 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
SDF2-205ENST00000587629 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 KRTAP7-1Q8IUC3 87 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 SPANXA1Q9NS26 97 aa3.87□□□□□ -1.79
SDF2-205ENST00000587629 TGIF2-C20orf24A0A0A6YYL0 155 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 M0QXV9 152 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BKO60814 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 NPYP01303 97 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BJP06899 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 UBE2D1P51668 147 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BHQ93079 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 PACRGQ96M98 296 aaPredicted RBP3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BNQ99877 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 HIST1H2BMQ99879 126 aa3.86□□□□□ -1.79
SDF2-205ENST00000587629 LOC389332A0A1B0GUA5 103 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 A0A1B0GW15 77 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 F8WDY8 70 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 TRGC2P03986 189 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 TLX1NBP0CAT3 122 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 RPL32P62910 135 aaKnown RBP3.85□□□□□ -1.79
SDF2-205ENST00000587629 MRPS36P82909 103 aaKnown RBP3.85□□□□□ -1.79
SDF2-205ENST00000587629 KIAA0087Q14695 138 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
SDF2-205ENST00000587629 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
SDF2-205ENST00000587629 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 HIST3H2BBQ8N257 126 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 LINC00469Q8N7U9 141 aa3.85□□□□□ -1.79
SDF2-205ENST00000587629 IGLV1-50A0A075B6I6 118 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 LINC00587B1AMM8 73 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 NDUFC2-KCTD14E9PQ53 114 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 TSPAN13O95857 204 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
SDF2-205ENST00000587629 PYY3Q5JQD4 70 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 PRELID3AQ96N28 172 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 TOMM7Q9P0U1 55 aa3.84□□□□□ -1.79
SDF2-205ENST00000587629 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 A0A1B0GXF2 115 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 PPBPP02775 128 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 CKS1BP61024 79 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 TMEM136Q6ZRR5 245 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 ORMDL3Q8N138 153 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 TMEM141Q96I45 108 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 XAGE1AQ9HD64 81 aa3.83□□□□□ -1.8
SDF2-205ENST00000587629 PRSS2P07478 247 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 FABP4P15090 132 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 DDTP30046 118 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 RPL13AP40429 203 aaKnown RBP3.82□□□□□ -1.8
SDF2-205ENST00000587629 C6orf226Q5I0X4 101 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 TEX43Q6ZNM6 134 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 C2orf88Q9BSF0 95 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 PYGO1Q9Y3Y4 419 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
SDF2-205ENST00000587629 ZNF861PO60384 105 aa3.81□□□□□ -1.8
SDF2-205ENST00000587629 C2orf66Q6UXQ4 117 aa3.81□□□□□ -1.8
SDF2-205ENST00000587629 Q6ZN92 141 aa3.81□□□□□ -1.8
SDF2-205ENST00000587629 ALKBH7Q9BT30 221 aaPredicted RBP3.81□□□□□ -1.8
SDF2-205ENST00000587629 VCX2Q9H322 139 aa3.81□□□□□ -1.8
SDF2-205ENST00000587629 MAP1LC3AQ9H492 121 aa3.81□□□□□ -1.8
SDF2-205ENST00000587629 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SDF2-205ENST00000587629 RPL37AP8A6NKH3 93 aa3.8□□□□□ -1.8
SDF2-205ENST00000587629 LINC00173Q6ZV60 143 aa3.8□□□□□ -1.8
SDF2-205ENST00000587629 GNB1LQ9BYB4 327 aa3.8□□□□□ -1.8
SDF2-205ENST00000587629 ANAPC11Q9NYG5 84 aa3.8□□□□□ -1.8
SDF2-205ENST00000587629 CYSLTR1Q9Y271 337 aa3.8□□□□□ -1.8
SDF2-205ENST00000587629 TRAPPC1Q9Y5R8 145 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms