RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 Q8IZM0 81 aa12.92□□□□□ -0.34
CIRBP-209ENST00000586555 CST9LQ9H4G1 147 aa12.92□□□□□ -0.34
CIRBP-209ENST00000586555 LINC00469Q8N7U9 141 aa12.91□□□□□ -0.34
CIRBP-209ENST00000586555 C9orf116Q5BN46 136 aaPredicted RBP12.9□□□□□ -0.34
CIRBP-209ENST00000586555 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
CIRBP-209ENST00000586555 HBDP02042 147 aa12.89□□□□□ -0.35
CIRBP-209ENST00000586555 A0A1W2PNN7 141 aa12.88□□□□□ -0.35
CIRBP-209ENST00000586555 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
CIRBP-209ENST00000586555 Q6ZRP5 223 aa12.88□□□□□ -0.35
CIRBP-209ENST00000586555 NDUFC2-KCTD14E9PQ53 114 aa12.87□□□□□ -0.35
CIRBP-209ENST00000586555 CXCL5P42830 114 aa12.87□□□□□ -0.35
CIRBP-209ENST00000586555 GAGE2EQ4V326 116 aa12.87□□□□□ -0.35
CIRBP-209ENST00000586555 YPEL4Q96NS1 127 aa12.87□□□□□ -0.35
CIRBP-209ENST00000586555 GAGE2DQ9UEU5 116 aa12.87□□□□□ -0.35
CIRBP-209ENST00000586555 UBR4Q5T4S7 5183 aa12.87□□□□□ -0.35
CIRBP-209ENST00000586555 NDUFA6P56556 154 aa12.86□□□□□ -0.35
CIRBP-209ENST00000586555 PDZD11Q5EBL8 140 aa12.86□□□□□ -0.35
CIRBP-209ENST00000586555 URB1-AS1Q96HZ7 61 aa12.86□□□□□ -0.35
CIRBP-209ENST00000586555 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
CIRBP-209ENST00000586555 H3BRM9 83 aa12.85□□□□□ -0.35
CIRBP-209ENST00000586555 ATP5LO75964 103 aa12.85□□□□□ -0.35
CIRBP-209ENST00000586555 F8VRH5 84 aa12.84□□□□□ -0.35
CIRBP-209ENST00000586555 A0A096LNJ9 63 aa12.83□□□□□ -0.36
CIRBP-209ENST00000586555 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
CIRBP-209ENST00000586555 CBLN2Q8IUK8 224 aa12.83□□□□□ -0.36
CIRBP-209ENST00000586555 SLC7A5P1Q8MH63 180 aa12.83□□□□□ -0.36
CIRBP-209ENST00000586555 CHCHD1Q96BP2 118 aaKnown RBP12.83□□□□□ -0.36
CIRBP-209ENST00000586555 PMCHL1Q16048 86 aa12.82□□□□□ -0.36
CIRBP-209ENST00000586555 COX7B2Q8TF08 81 aa12.82□□□□□ -0.36
CIRBP-209ENST00000586555 TNXBP22105 4242 aa12.8□□□□□ -0.36
CIRBP-209ENST00000586555 MT1HL1P0DM35 61 aa12.8□□□□□ -0.36
CIRBP-209ENST00000586555 IGLC3P0DOY3 106 aa12.8□□□□□ -0.36
CIRBP-209ENST00000586555 PHF5AQ7RTV0 110 aaKnown RBP12.8□□□□□ -0.36
CIRBP-209ENST00000586555 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
CIRBP-209ENST00000586555 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
CIRBP-209ENST00000586555 FAM19A5Q7Z5A7 132 aaPredicted RBP12.79□□□□□ -0.36
CIRBP-209ENST00000586555 FAM168BA1KXE4 195 aa12.78□□□□□ -0.36
CIRBP-209ENST00000586555 BAGE3Q86Y29 109 aa12.78□□□□□ -0.36
CIRBP-209ENST00000586555 PLA2G2DQ9UNK4 145 aa12.78□□□□□ -0.36
CIRBP-209ENST00000586555 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
CIRBP-209ENST00000586555 HSBP1O75506 76 aa12.75□□□□□ -0.37
CIRBP-209ENST00000586555 C9orf129Q5T035 196 aaKnown RBP12.75□□□□□ -0.37
CIRBP-209ENST00000586555 M0QXV9 152 aa12.74□□□□□ -0.37
CIRBP-209ENST00000586555 TRGC2P03986 189 aa12.74□□□□□ -0.37
CIRBP-209ENST00000586555 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
CIRBP-209ENST00000586555 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
CIRBP-209ENST00000586555 UBE2BP63146 152 aa12.73□□□□□ -0.37
CIRBP-209ENST00000586555 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
CIRBP-209ENST00000586555 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■■□□□ 13.7
CIRBP-209ENST00000586555 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
CIRBP-209ENST00000586555 IFI27L1Q96BM0 104 aa12.72□□□□□ -0.37
CIRBP-209ENST00000586555 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
CIRBP-209ENST00000586555 XAGE1AQ9HD64 81 aa12.71□□□□□ -0.37
CIRBP-209ENST00000586555 TRAV12-1A0A0B4J245 112 aa12.7□□□□□ -0.38
CIRBP-209ENST00000586555 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
CIRBP-209ENST00000586555 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
CIRBP-209ENST00000586555 LBHQ53QV2 105 aaPredicted RBP12.69□□□□□ -0.38
CIRBP-209ENST00000586555 SFTA2Q6UW10 78 aa12.69□□□□□ -0.38
CIRBP-209ENST00000586555 KRTAP7-1Q8IUC3 87 aa12.68□□□□□ -0.38
CIRBP-209ENST00000586555 ODF1Q14990 250 aa12.67□□□□□ -0.38
CIRBP-209ENST00000586555 FAM19A2Q8N3H0 131 aa12.67□□□□□ -0.38
CIRBP-209ENST00000586555 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
CIRBP-209ENST00000586555 COLCA2A8K830 154 aa12.66□□□□□ -0.38
CIRBP-209ENST00000586555 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
CIRBP-209ENST00000586555 C22orf24Q9Y442 160 aa12.66□□□□□ -0.38
CIRBP-209ENST00000586555 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
CIRBP-209ENST00000586555 TP73-AS1Q9UF72 201 aa12.64□□□□□ -0.39
CIRBP-209ENST00000586555 SERF1AO75920 110 aa12.63□□□□□ -0.39
CIRBP-209ENST00000586555 PFN2P35080 140 aa12.63□□□□□ -0.39
CIRBP-209ENST00000586555 LRP2P98164 4655 aa12.63□□□□□ -0.39
CIRBP-209ENST00000586555 COX17Q14061 63 aa12.63□□□□□ -0.39
CIRBP-209ENST00000586555 DIRC1Q969H9 104 aa12.63□□□□□ -0.39
CIRBP-209ENST00000586555 KRTAP11-1Q8IUC1 163 aa12.62□□□□□ -0.39
CIRBP-209ENST00000586555 MRPL55Q7Z7F7 128 aaKnown RBP12.61□□□□□ -0.39
CIRBP-209ENST00000586555 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
CIRBP-209ENST00000586555 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
CIRBP-209ENST00000586555 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
CIRBP-209ENST00000586555 NUPR1O60356 82 aa12.6□□□□□ -0.39
CIRBP-209ENST00000586555 H0Y8G0 127 aa12.59□□□□□ -0.39
CIRBP-209ENST00000586555 NKAPP1Q8N9T2 125 aa12.59□□□□□ -0.39
CIRBP-209ENST00000586555 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
CIRBP-209ENST00000586555 LINC00310P59036 64 aa12.56□□□□□ -0.4
CIRBP-209ENST00000586555 IGLV5-37A0A075B6J1 123 aa12.55□□□□□ -0.4
CIRBP-209ENST00000586555 H0Y9J4 135 aa12.55□□□□□ -0.4
CIRBP-209ENST00000586555 FABP4P15090 132 aa12.55□□□□□ -0.4
CIRBP-209ENST00000586555 PLNP26678 52 aa12.54□□□□□ -0.4
CIRBP-209ENST00000586555 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
CIRBP-209ENST00000586555 LINC00167Q96N53 147 aa12.54□□□□□ -0.4
CIRBP-209ENST00000586555 SND1-IT1Q9HBX3 110 aa12.54□□□□□ -0.4
CIRBP-209ENST00000586555 ATP6V1G1O75348 118 aa12.53□□□□□ -0.4
CIRBP-209ENST00000586555 LINC00158P58513 81 aa12.53□□□□□ -0.4
CIRBP-209ENST00000586555 SCO1O75880 301 aa12.52□□□□□ -0.41
CIRBP-209ENST00000586555 KRTAP10-8P60410 259 aa12.52□□□□□ -0.41
CIRBP-209ENST00000586555 HERV-K104P63124 156 aa12.52□□□□□ -0.41
CIRBP-209ENST00000586555 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
CIRBP-209ENST00000586555 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
CIRBP-209ENST00000586555 ZNF861PO60384 105 aa12.51□□□□□ -0.41
CIRBP-209ENST00000586555 MAP1LC3CQ9BXW4 147 aa12.51□□□□□ -0.41
CIRBP-209ENST00000586555 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
CIRBP-209ENST00000586555 BCE1O60756 84 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 317.1 ms