RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 Q6ZRP5 223 aa8.72□□□□□ -1.01
GGA3-215ENST00000582821 J3QL48 77 aa8.71□□□□□ -1.02
GGA3-215ENST00000582821 HBDP02042 147 aa8.71□□□□□ -1.02
GGA3-215ENST00000582821 PRSS2P07478 247 aa8.71□□□□□ -1.02
GGA3-215ENST00000582821 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
GGA3-215ENST00000582821 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
GGA3-215ENST00000582821 SLC7A5P1Q8MH63 180 aa8.71□□□□□ -1.02
GGA3-215ENST00000582821 PACRGQ96M98 296 aaPredicted RBP8.71□□□□□ -1.02
GGA3-215ENST00000582821 PRR3P79522 188 aaKnown RBP8.7□□□□□ -1.02
GGA3-215ENST00000582821 PDZD11Q5EBL8 140 aa8.7□□□□□ -1.02
GGA3-215ENST00000582821 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
GGA3-215ENST00000582821 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
GGA3-215ENST00000582821 CKS1BP61024 79 aa8.69□□□□□ -1.02
GGA3-215ENST00000582821 CBLN2Q8IUK8 224 aa8.69□□□□□ -1.02
GGA3-215ENST00000582821 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
GGA3-215ENST00000582821 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
GGA3-215ENST00000582821 CXCL5P42830 114 aa8.68□□□□□ -1.02
GGA3-215ENST00000582821 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
GGA3-215ENST00000582821 ATP5LO75964 103 aa8.67□□□□□ -1.02
GGA3-215ENST00000582821 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
GGA3-215ENST00000582821 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
GGA3-215ENST00000582821 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
GGA3-215ENST00000582821 F8VRH5 84 aa8.66□□□□□ -1.02
GGA3-215ENST00000582821 PMCHL1Q16048 86 aa8.66□□□□□ -1.02
GGA3-215ENST00000582821 H3BRM9 83 aa8.65□□□□□ -1.02
GGA3-215ENST00000582821 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
GGA3-215ENST00000582821 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
GGA3-215ENST00000582821 NDUFA6P56556 154 aa8.64□□□□□ -1.03
GGA3-215ENST00000582821 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
GGA3-215ENST00000582821 ODF1Q14990 250 aa8.64□□□□□ -1.03
GGA3-215ENST00000582821 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
GGA3-215ENST00000582821 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
GGA3-215ENST00000582821 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
GGA3-215ENST00000582821 TRGC2P03986 189 aa8.63□□□□□ -1.03
GGA3-215ENST00000582821 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
GGA3-215ENST00000582821 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
GGA3-215ENST00000582821 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
GGA3-215ENST00000582821 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
GGA3-215ENST00000582821 COLCA2A8K830 154 aa8.62□□□□□ -1.03
GGA3-215ENST00000582821 ZNF22P17026 224 aaPredicted RBP8.62□□□□□ -1.03
GGA3-215ENST00000582821 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
GGA3-215ENST00000582821 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
GGA3-215ENST00000582821 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
GGA3-215ENST00000582821 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
GGA3-215ENST00000582821 C11orf86A6NJI1 115 aa8.59□□□□□ -1.03
GGA3-215ENST00000582821 HSBP1O75506 76 aa8.59□□□□□ -1.03
GGA3-215ENST00000582821 M0QXV9 152 aa8.58□□□□□ -1.04
GGA3-215ENST00000582821 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
GGA3-215ENST00000582821 KRTAP11-1Q8IUC1 163 aa8.58□□□□□ -1.04
GGA3-215ENST00000582821 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
GGA3-215ENST00000582821 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
GGA3-215ENST00000582821 C1orf137Q5JT78 98 aa8.57□□□□□ -1.04
GGA3-215ENST00000582821 FAM19A2Q8N3H0 131 aa8.57□□□□□ -1.04
GGA3-215ENST00000582821 LINC01600Q96MT4 127 aa8.57□□□□□ -1.04
GGA3-215ENST00000582821 LINC00310P59036 64 aa8.56□□□□□ -1.04
GGA3-215ENST00000582821 SERTAD4-AS1Q5TG53 156 aa8.56□□□□□ -1.04
GGA3-215ENST00000582821 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
GGA3-215ENST00000582821 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
GGA3-215ENST00000582821 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
GGA3-215ENST00000582821 TNXBP22105 4242 aa8.55□□□□□ -1.04
GGA3-215ENST00000582821 SERF1AO75920 110 aa8.55□□□□□ -1.04
GGA3-215ENST00000582821 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
GGA3-215ENST00000582821 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
GGA3-215ENST00000582821 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
GGA3-215ENST00000582821 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
GGA3-215ENST00000582821 UBE2BP63146 152 aa8.54□□□□□ -1.04
GGA3-215ENST00000582821 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
GGA3-215ENST00000582821 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
GGA3-215ENST00000582821 LEPROTL1O95214 131 aa8.53□□□□□ -1.04
GGA3-215ENST00000582821 COX17Q14061 63 aa8.53□□□□□ -1.04
GGA3-215ENST00000582821 NUPR1O60356 82 aa8.52□□□□□ -1.05
GGA3-215ENST00000582821 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
GGA3-215ENST00000582821 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
GGA3-215ENST00000582821 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
GGA3-215ENST00000582821 MRPL55Q7Z7F7 128 aaKnown RBP8.51□□□□□ -1.05
GGA3-215ENST00000582821 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
GGA3-215ENST00000582821 PFN2P35080 140 aa8.5□□□□□ -1.05
GGA3-215ENST00000582821 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
GGA3-215ENST00000582821 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
GGA3-215ENST00000582821 SCO1O75880 301 aa8.49□□□□□ -1.05
GGA3-215ENST00000582821 HMCN2Q8NDA2 5059 aa8.48□□□□□ -1.05
GGA3-215ENST00000582821 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
GGA3-215ENST00000582821 SND1-IT1Q9HBX3 110 aa8.48□□□□□ -1.05
GGA3-215ENST00000582821 H0Y9J4 135 aa8.47□□□□□ -1.05
GGA3-215ENST00000582821 ZNF861PO60384 105 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BKO60814 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BJP06899 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 FABP4P15090 132 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BOP23527 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BBP33778 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BDP58876 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BCP62807 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST2H2BEQ16778 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BHQ93079 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BNQ99877 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 HIST1H2BMQ99879 126 aa8.46□□□□□ -1.06
GGA3-215ENST00000582821 H0Y8G0 127 aa8.45□□□□□ -1.06
GGA3-215ENST00000582821 PLNP26678 52 aa8.45□□□□□ -1.06
GGA3-215ENST00000582821 NKAPP1Q8N9T2 125 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 358.4 ms