RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 NAV2Q8IVL1 2488 aa6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 PLAC8L1A1L4L8 177 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 A0A087WZ39 114 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 FSHBP01225 129 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 GIG44P09565 113 aaPredicted RBP6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 UPK3BQ9BT76 320 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 ABCA12Q86UK0 2595 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 NF1P21359 2839 aa6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 FN1P02751 2386 aaKnown RBP6.67□□□□□ -1.34
PPP4R1-222ENST00000582594 TRAV23DV6A0A075B6W5 121 aa6.66□□□□□ -1.34
PPP4R1-222ENST00000582594 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
PPP4R1-222ENST00000582594 CCKP06307 115 aa6.66□□□□□ -1.34
PPP4R1-222ENST00000582594 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
PPP4R1-222ENST00000582594 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
PPP4R1-222ENST00000582594 A0A096LPF7 62 aa6.65□□□□□ -1.34
PPP4R1-222ENST00000582594 OXTP01178 125 aa6.65□□□□□ -1.34
PPP4R1-222ENST00000582594 DEFB130BP0DP73 79 aa6.65□□□□□ -1.35
PPP4R1-222ENST00000582594 DEFB130AP0DP74 79 aa6.65□□□□□ -1.35
PPP4R1-222ENST00000582594 C16orf74Q96GX8 76 aa6.65□□□□□ -1.35
PPP4R1-222ENST00000582594 PIEZO1Q92508 2521 aa6.64□□□□□ -1.35
PPP4R1-222ENST00000582594 CCL24O00175 119 aa6.64□□□□□ -1.35
PPP4R1-222ENST00000582594 FHL2Q14192 279 aa6.64□□□□□ -1.35
PPP4R1-222ENST00000582594 ENHOQ6UWT2 76 aa6.64□□□□□ -1.35
PPP4R1-222ENST00000582594 GHRHP01286 108 aa6.64□□□□□ -1.35
PPP4R1-222ENST00000582594 TMEM258P61165 79 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 ZNF469Q96JG9 3925 aaPredicted RBP6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 TRAV25A0A0B4J276 109 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 LY6G6DO95868 133 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 NANOS2P60321 138 aaKnown RBP6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 C5orf47Q569G3 176 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 TMEM86BQ8N661 226 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 KRTAP10-9P60411 292 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 C9orf116Q5BN46 136 aaPredicted RBP6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 Q8N814 137 aa6.63□□□□□ -1.35
PPP4R1-222ENST00000582594 ZNF843Q8N446 348 aa6.62□□□□□ -1.35
PPP4R1-222ENST00000582594 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
PPP4R1-222ENST00000582594 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-222ENST00000582594 IGLV10-54A0A075B6I4 117 aa6.61□□□□□ -1.35
PPP4R1-222ENST00000582594 GYPEP15421 78 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 C4orf26Q17RF5 130 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 CCDC168Q8NDH2 2452 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 C6orf99Q4VX62 202 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 C20orf197Q8N268 126 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 Q8NDZ9 215 aa6.6□□□□□ -1.35
PPP4R1-222ENST00000582594 ZFYVE26Q68DK2 2539 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 TMEM256-PLSCR3K7ERE1 68 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 Q8N3U1 123 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 LINC00167Q96N53 147 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 M0R2N4 97 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 S100A7L2Q5SY68 101 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 Q8IZM0 81 aa6.59□□□□□ -1.35
PPP4R1-222ENST00000582594 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
PPP4R1-222ENST00000582594 DNAJC9-AS1A6NH13 148 aa6.58□□□□□ -1.36
PPP4R1-222ENST00000582594 HRCT1Q6UXD1 115 aa6.58□□□□□ -1.36
PPP4R1-222ENST00000582594 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
PPP4R1-222ENST00000582594 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
PPP4R1-222ENST00000582594 GCN1Q92616 2671 aaKnown RBP6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 J3QKU1 62 aa6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 SPATA3Q8NHX4 192 aa6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 C19orf73Q9NVV2 129 aa6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 PRB1P04280 392 aa6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 ESM1Q9NQ30 184 aa6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
PPP4R1-222ENST00000582594 BBC3Q96PG8 261 aaPredicted RBP6.56□□□□□ -1.36
PPP4R1-222ENST00000582594 HAMPP81172 84 aa6.56□□□□□ -1.36
PPP4R1-222ENST00000582594 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 KRTAP21-3Q3LHN1 58 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 APCP25054 2843 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 Q5XG85 94 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 C6orf223Q8N319 242 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 ZNF462Q96JM2 2506 aa6.55□□□□□ -1.36
PPP4R1-222ENST00000582594 ANGP03950 147 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 RBM3P98179 157 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 LINC00575Q6W349 94 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 DEFB4AO15263 64 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 DEFB113Q30KQ7 82 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 Q6ZQT0 140 aa6.54□□□□□ -1.36
PPP4R1-222ENST00000582594 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 A0A1B0GUV1 79 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 NDUFC2O95298 119 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 IGLV1-51P01701 117 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 CMC4P56277 68 aaPredicted RBP6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 LINC01006Q8NI28 216 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 SNURFQ9Y675 71 aa6.53□□□□□ -1.36
PPP4R1-222ENST00000582594 CD164L2Q6UWJ8 174 aa6.52□□□□□ -1.37
PPP4R1-222ENST00000582594 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
PPP4R1-222ENST00000582594 MTORP42345 2549 aa6.52□□□□□ -1.37
PPP4R1-222ENST00000582594 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
PPP4R1-222ENST00000582594 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms