RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
ITGB4-205ENST00000579211 DMBT1Q9UGM3 2413 aaPredicted RBP11□□□□□ -0.65
ITGB4-205ENST00000579211 ATP5LO75964 103 aa10.99□□□□□ -0.65
ITGB4-205ENST00000579211 H3BRM9 83 aa10.98□□□□□ -0.65
ITGB4-205ENST00000579211 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
ITGB4-205ENST00000579211 C9orf116Q5BN46 136 aaPredicted RBP10.98□□□□□ -0.65
ITGB4-205ENST00000579211 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
ITGB4-205ENST00000579211 PDZD11Q5EBL8 140 aa10.97□□□□□ -0.65
ITGB4-205ENST00000579211 Q6ZRP5 223 aa10.97□□□□□ -0.65
ITGB4-205ENST00000579211 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
ITGB4-205ENST00000579211 A0A096LNJ9 63 aa10.96□□□□□ -0.65
ITGB4-205ENST00000579211 A0A1W2PNN7 141 aa10.96□□□□□ -0.65
ITGB4-205ENST00000579211 SPINK8P0C7L1 97 aa10.96□□□□□ -0.65
ITGB4-205ENST00000579211 COX7B2Q8TF08 81 aa10.96□□□□□ -0.65
ITGB4-205ENST00000579211 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
ITGB4-205ENST00000579211 TRGC2P03986 189 aa10.95□□□□□ -0.66
ITGB4-205ENST00000579211 CXCL5P42830 114 aa10.95□□□□□ -0.66
ITGB4-205ENST00000579211 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
ITGB4-205ENST00000579211 SMIM1B2RUZ4 78 aa10.94□□□□□ -0.66
ITGB4-205ENST00000579211 F8VRH5 84 aa10.94□□□□□ -0.66
ITGB4-205ENST00000579211 HSBP1O75506 76 aa10.94□□□□□ -0.66
ITGB4-205ENST00000579211 MYCBP2O75592 4640 aa10.93□□□□□ -0.66
ITGB4-205ENST00000579211 HNRNPA3P51991 378 aaKnown RBP10.93□□□□□ -0.66
ITGB4-205ENST00000579211 KRTAP29-1A8MX34 341 aaPredicted RBP10.92□□□□□ -0.66
ITGB4-205ENST00000579211 IGLC3P0DOY3 106 aa10.92□□□□□ -0.66
ITGB4-205ENST00000579211 PRR3P79522 188 aaKnown RBP10.92□□□□□ -0.66
ITGB4-205ENST00000579211 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
ITGB4-205ENST00000579211 OXTP01178 125 aa10.91□□□□□ -0.66
ITGB4-205ENST00000579211 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
ITGB4-205ENST00000579211 FAM168BA1KXE4 195 aa10.9□□□□□ -0.66
ITGB4-205ENST00000579211 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.66
ITGB4-205ENST00000579211 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
ITGB4-205ENST00000579211 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
ITGB4-205ENST00000579211 FAM19A2Q8N3H0 131 aa10.89□□□□□ -0.67
ITGB4-205ENST00000579211 PKHD1L1Q86WI1 4243 aa10.88□□□□□ -0.67
ITGB4-205ENST00000579211 COLCA2A8K830 154 aa10.88□□□□□ -0.67
ITGB4-205ENST00000579211 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
ITGB4-205ENST00000579211 UBE2BP63146 152 aa10.86□□□□□ -0.67
ITGB4-205ENST00000579211 C9orf129Q5T035 196 aaKnown RBP10.86□□□□□ -0.67
ITGB4-205ENST00000579211 XAGE1AQ9HD64 81 aa10.86□□□□□ -0.67
ITGB4-205ENST00000579211 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
ITGB4-205ENST00000579211 C11orf86A6NJI1 115 aa10.85□□□□□ -0.67
ITGB4-205ENST00000579211 H0Y8G0 127 aa10.85□□□□□ -0.67
ITGB4-205ENST00000579211 M0QXV9 152 aa10.85□□□□□ -0.67
ITGB4-205ENST00000579211 C1orf137Q5JT78 98 aa10.85□□□□□ -0.67
ITGB4-205ENST00000579211 PSORS1C2Q9UIG4 136 aa10.85□□□□□ -0.67
ITGB4-205ENST00000579211 SERF1AO75920 110 aa10.84□□□□□ -0.67
ITGB4-205ENST00000579211 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
ITGB4-205ENST00000579211 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
ITGB4-205ENST00000579211 IGLV5-39A0A0G2JS06 123 aa10.82□□□□□ -0.68
ITGB4-205ENST00000579211 SCO1O75880 301 aa10.82□□□□□ -0.68
ITGB4-205ENST00000579211 PFN2P35080 140 aa10.81□□□□□ -0.68
ITGB4-205ENST00000579211 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
ITGB4-205ENST00000579211 FABP4P15090 132 aa10.8□□□□□ -0.68
ITGB4-205ENST00000579211 LBHQ53QV2 105 aaPredicted RBP10.8□□□□□ -0.68
ITGB4-205ENST00000579211 HSPB8Q9UJY1 196 aa10.8□□□□□ -0.68
ITGB4-205ENST00000579211 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
ITGB4-205ENST00000579211 ZNF625Q96I27 306 aaPredicted RBP10.79□□□□□ -0.68
ITGB4-205ENST00000579211 C22orf24Q9Y442 160 aa10.79□□□□□ -0.68
ITGB4-205ENST00000579211 LRP1Q07954 4544 aaKnown RBP10.79□□□□□ -0.68
ITGB4-205ENST00000579211 SERTAD4-AS1Q5TG53 156 aa10.78□□□□□ -0.68
ITGB4-205ENST00000579211 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
ITGB4-205ENST00000579211 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
ITGB4-205ENST00000579211 ERG28Q9UKR5 140 aa10.77□□□□□ -0.69
ITGB4-205ENST00000579211 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
ITGB4-205ENST00000579211 NUPR1O60356 82 aa10.76□□□□□ -0.69
ITGB4-205ENST00000579211 LINC00310P59036 64 aa10.76□□□□□ -0.69
ITGB4-205ENST00000579211 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
ITGB4-205ENST00000579211 HERC1Q15751 4861 aa10.76□□□□□ -0.69
ITGB4-205ENST00000579211 IGLV7-43P04211 117 aa10.75□□□□□ -0.69
ITGB4-205ENST00000579211 COX17Q14061 63 aa10.75□□□□□ -0.69
ITGB4-205ENST00000579211 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
ITGB4-205ENST00000579211 ATP6V1G1O75348 118 aa10.74□□□□□ -0.69
ITGB4-205ENST00000579211 ODF1Q14990 250 aa10.74□□□□□ -0.69
ITGB4-205ENST00000579211 MRPL55Q7Z7F7 128 aaKnown RBP10.74□□□□□ -0.69
ITGB4-205ENST00000579211 LINC00158P58513 81 aa10.73□□□□□ -0.69
ITGB4-205ENST00000579211 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
ITGB4-205ENST00000579211 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
ITGB4-205ENST00000579211 TP73-AS1Q9UF72 201 aa10.73□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 PLNP26678 52 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 DIRC1Q969H9 104 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 PLA2G2DQ9UNK4 145 aa10.72□□□□□ -0.69
ITGB4-205ENST00000579211 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
ITGB4-205ENST00000579211 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
ITGB4-205ENST00000579211 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
ITGB4-205ENST00000579211 DPM2O94777 84 aa10.7□□□□□ -0.7
ITGB4-205ENST00000579211 HERVK_113P61574 105 aa10.7□□□□□ -0.7
ITGB4-205ENST00000579211 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
ITGB4-205ENST00000579211 MEIG1Q5JSS6 88 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms