RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
SS18-212ENST00000579061 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
SS18-212ENST00000579061 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.94
SS18-212ENST00000579061 PMVKQ15126 192 aa9.21□□□□□ -0.94
SS18-212ENST00000579061 CST9LQ9H4G1 147 aa9.21□□□□□ -0.94
SS18-212ENST00000579061 TOMM7Q9P0U1 55 aa9.21□□□□□ -0.94
SS18-212ENST00000579061 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
SS18-212ENST00000579061 LINC00614P0C842 121 aa9.2□□□□□ -0.94
SS18-212ENST00000579061 CKS1BP61024 79 aa9.2□□□□□ -0.94
SS18-212ENST00000579061 LINC00469Q8N7U9 141 aa9.2□□□□□ -0.94
SS18-212ENST00000579061 CXCL5P42830 114 aa9.19□□□□□ -0.94
SS18-212ENST00000579061 RAB5BP61020 215 aa9.19□□□□□ -0.94
SS18-212ENST00000579061 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
SS18-212ENST00000579061 PDZD11Q5EBL8 140 aa9.19□□□□□ -0.94
SS18-212ENST00000579061 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
SS18-212ENST00000579061 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
SS18-212ENST00000579061 A0A096LNJ9 63 aa9.18□□□□□ -0.94
SS18-212ENST00000579061 SMIM1B2RUZ4 78 aa9.18□□□□□ -0.94
SS18-212ENST00000579061 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
SS18-212ENST00000579061 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
SS18-212ENST00000579061 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
SS18-212ENST00000579061 URB1-AS1Q96HZ7 61 aa9.18□□□□□ -0.94
SS18-212ENST00000579061 YPEL4Q96NS1 127 aa9.18□□□□□ -0.94
SS18-212ENST00000579061 F8VRH5 84 aa9.17□□□□□ -0.94
SS18-212ENST00000579061 HBDP02042 147 aa9.17□□□□□ -0.94
SS18-212ENST00000579061 MT1HL1P0DM35 61 aa9.17□□□□□ -0.94
SS18-212ENST00000579061 PSORS1C2Q9UIG4 136 aa9.17□□□□□ -0.94
SS18-212ENST00000579061 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
SS18-212ENST00000579061 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
SS18-212ENST00000579061 H3BRM9 83 aa9.14□□□□□ -0.95
SS18-212ENST00000579061 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
SS18-212ENST00000579061 ODF1Q14990 250 aa9.14□□□□□ -0.95
SS18-212ENST00000579061 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
SS18-212ENST00000579061 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
SS18-212ENST00000579061 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
SS18-212ENST00000579061 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
SS18-212ENST00000579061 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
SS18-212ENST00000579061 ATP5LO75964 103 aa9.13□□□□□ -0.95
SS18-212ENST00000579061 M0QXV9 152 aa9.12□□□□□ -0.95
SS18-212ENST00000579061 SPINK8P0C7L1 97 aa9.12□□□□□ -0.95
SS18-212ENST00000579061 C1orf137Q5JT78 98 aa9.12□□□□□ -0.95
SS18-212ENST00000579061 TNXBP22105 4242 aa9.12□□□□□ -0.95
SS18-212ENST00000579061 NDUFA6P56556 154 aa9.11□□□□□ -0.95
SS18-212ENST00000579061 PMCHL1Q16048 86 aa9.11□□□□□ -0.95
SS18-212ENST00000579061 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
SS18-212ENST00000579061 IGLV5-39A0A0G2JS06 123 aa9.1□□□□□ -0.95
SS18-212ENST00000579061 IGLV7-43P04211 117 aa9.09□□□□□ -0.95
SS18-212ENST00000579061 ZNF22P17026 224 aaPredicted RBP9.09□□□□□ -0.95
SS18-212ENST00000579061 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
SS18-212ENST00000579061 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
SS18-212ENST00000579061 CBLN2Q8IUK8 224 aa9.09□□□□□ -0.95
SS18-212ENST00000579061 UBE2BP63146 152 aa9.08□□□□□ -0.96
SS18-212ENST00000579061 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
SS18-212ENST00000579061 TP73-AS1Q9UF72 201 aa9.08□□□□□ -0.96
SS18-212ENST00000579061 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
SS18-212ENST00000579061 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
SS18-212ENST00000579061 LBHQ53QV2 105 aaPredicted RBP9.06□□□□□ -0.96
SS18-212ENST00000579061 DIRC1Q969H9 104 aa9.06□□□□□ -0.96
SS18-212ENST00000579061 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
SS18-212ENST00000579061 C22orf24Q9Y442 160 aa9.06□□□□□ -0.96
SS18-212ENST00000579061 TRAV12-1A0A0B4J245 112 aa9.05□□□□□ -0.96
SS18-212ENST00000579061 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
SS18-212ENST00000579061 CHTOPQ9Y3Y2 248 aaKnown RBP9.05□□□□□ -0.96
SS18-212ENST00000579061 HSBP1O75506 76 aa9.04□□□□□ -0.96
SS18-212ENST00000579061 TRGC2P03986 189 aa9.04□□□□□ -0.96
SS18-212ENST00000579061 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
SS18-212ENST00000579061 NUPR1O60356 82 aa9.03□□□□□ -0.96
SS18-212ENST00000579061 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
SS18-212ENST00000579061 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
SS18-212ENST00000579061 H0Y9J4 135 aa9.02□□□□□ -0.97
SS18-212ENST00000579061 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.97
SS18-212ENST00000579061 HMCN2Q8NDA2 5059 aa9.02□□□□□ -0.97
SS18-212ENST00000579061 COX17Q14061 63 aa9.01□□□□□ -0.97
SS18-212ENST00000579061 SCO1O75880 301 aa9□□□□□ -0.97
SS18-212ENST00000579061 FAM19A2Q8N3H0 131 aa9□□□□□ -0.97
SS18-212ENST00000579061 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
SS18-212ENST00000579061 COLCA2A8K830 154 aa8.99□□□□□ -0.97
SS18-212ENST00000579061 PFN2P35080 140 aa8.99□□□□□ -0.97
SS18-212ENST00000579061 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
SS18-212ENST00000579061 ZNF861PO60384 105 aa8.98□□□□□ -0.97
SS18-212ENST00000579061 ZNF625Q96I27 306 aaPredicted RBP8.98□□□□□ -0.97
SS18-212ENST00000579061 LINC00167Q96N53 147 aa8.98□□□□□ -0.97
SS18-212ENST00000579061 SERF1AO75920 110 aa8.97□□□□□ -0.97
SS18-212ENST00000579061 LINC00310P59036 64 aa8.97□□□□□ -0.97
SS18-212ENST00000579061 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
SS18-212ENST00000579061 LEPROTL1O95214 131 aa8.96□□□□□ -0.98
SS18-212ENST00000579061 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.98
SS18-212ENST00000579061 IGLV1-50A0A075B6I6 118 aa8.95□□□□□ -0.98
SS18-212ENST00000579061 BCE1O60756 84 aa8.95□□□□□ -0.98
SS18-212ENST00000579061 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
SS18-212ENST00000579061 RPL24P83731 157 aaKnown RBP8.94□□□□□ -0.98
SS18-212ENST00000579061 HSPB8Q9UJY1 196 aa8.94□□□□□ -0.98
SS18-212ENST00000579061 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
SS18-212ENST00000579061 VPREB1P12018 145 aa8.93□□□□□ -0.98
SS18-212ENST00000579061 RPL28P46779 137 aaKnown RBP8.93□□□□□ -0.98
SS18-212ENST00000579061 GAGE10A6NGK3 116 aa8.92□□□□□ -0.98
SS18-212ENST00000579061 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
SS18-212ENST00000579061 LINC00158P58513 81 aa8.91□□□□□ -0.98
SS18-212ENST00000579061 HERV-K104P63124 156 aa8.91□□□□□ -0.98
SS18-212ENST00000579061 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms