RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 MRPS36P82909 103 aaKnown RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 RNASE13Q5GAN3 156 aaKnown RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 S100A7L2Q5SY68 101 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 UNQ9165/PRO28630Q6UXU0 137 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 NTM-AS1Q6ZSK4 140 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 VMO1Q7Z5L0 202 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 APRG1Q8IVJ8 170 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 MIR7-3HGQ8N6C7 128 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 ZFAND2AQ8N6M9 145 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 LINC00308Q8TCZ7 52 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 ITLN2Q8WWU7 325 aaPredicted RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 COPS9Q8WXC6 57 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 ZNF625Q96I27 306 aaPredicted RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 PHLDA3Q9Y5J5 127 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 FREM2Q5SZK8 3169 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 LAMA2P24043 3122 aaKnown RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 ICE1Q9Y2F5 2266 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 DNAJC13O75165 2243 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 KIAA0100Q14667 2235 aaKnown RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 MUC4Q99102 2169 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 ARHGAP32A7KAX9 2087 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV3-49A0A0A0MS15 119 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV13-2A0A0B4J235 113 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV10A0A0B4J240 114 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV21A0A0B4J279 112 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 CLPSL1A2RUU4 121 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 E7EQL1 145 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 C5orf67F2Z3F1 127 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 MIFP14174 115 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 S100A4P26447 101 aaKnown RBP1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 DAD1P61803 113 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 ESRGQ1W209 222 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 FAM74A4Q5TZK3 123 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 KTN1-AS1Q86SY8 53 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 LINC00337Q8N6G1 96 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 RBM12B-AS1Q9P1G2 102 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 KLK9Q9UKQ9 250 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 ZGRF1Q86YA3 2104 aa1.22□□□□□ -2.21
PTP4A1-204ENST00000578299 CFAP54Q96N23 3096 aa1.21□□□□□ -2.21
PTP4A1-204ENST00000578299 POLEQ07864 2286 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 IGLV3-9A0A075B6K5 115 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 TRBV10-3A0A0K0K1G6 114 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 hDV103S1A0JD37 113 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 ODF3BA8MYP8 253 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 M0QY20 66 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 M0R1B8 84 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 M0R2N4 97 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 LECT2O14960 151 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 GNRH2O43555 120 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 NDUFC1O43677 76 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 BCE1O60756 84 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 PRB1P04280 392 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 CCL4P13236 92 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 FUSP35637 526 aaKnown RBP eCLIP1.21□□□□□ -2.221e-7■□□□□ 9.6
PTP4A1-204ENST00000578299 KRTAP10-1P60331 282 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 NREPQ16612 68 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 CLEC19AQ6UXS0 136 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 MRPL55Q7Z7F7 128 aaKnown RBP1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 CNEP1R1Q8N9A8 125 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 LY6G5BQ8NDX9 201 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 TMEM254Q8TBM7 123 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 CAMK2N2Q96S95 79 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 TM2D3Q9BRN9 247 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 LINC00467Q9BRT7 94 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 CHCHD7Q9BUK0 85 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 C11orf68Q9H3H3 251 aaKnown RBP1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 ORMDL1Q9P0S3 153 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 CDKN2A-AS1Q9UH64 79 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 FAM186AA6NE01 2351 aa1.21□□□□□ -2.22
PTP4A1-204ENST00000578299 PTPRQQ9UMZ3 2332 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 WDFY4Q6ZS81 3184 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 CELSR3Q9NYQ7 3312 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 TRBV10-1A0A0K0K1A3 114 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 TMEM256-PLSCR3K7ERE1 68 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 BPY2O14599 106 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 NDUFB3O43676 98 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 UBE2BP63146 152 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 SCXQ7RTU7 201 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 Q8N6K4 173 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 TMEM105Q8N8V8 129 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 SMIM11BQ8TCY0 68 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 UBE2E2Q96LR5 201 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 RNF5Q99942 180 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 LINC00588Q9Y4M8 146 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 LENEPQ9Y5L5 61 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 AHCTF1Q8WYP5 2266 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 SVEP1Q4LDE5 3571 aa1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 ANK3Q12955 4377 aaKnown RBP1.2□□□□□ -2.22
PTP4A1-204ENST00000578299 NBPF19A0A087WUL8 3843 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 ASPMQ8IZT6 3477 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 REV3LO60673 3130 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 LOC110117498A0A087WWA1 95 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 A0A096LNT2 108 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 IGHV3-73A0A0B4J1V6 119 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 TRAV22A0A0B4J277 110 aa1.19□□□□□ -2.22
PTP4A1-204ENST00000578299 A6NN06 94 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms