RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 Q6ZRU5 148 aa6.03□□□□□ -1.44
NPLOC4-219ENST00000576713 CIRBP-AS1Q8TBR5 109 aa6.03□□□□□ -1.44
NPLOC4-219ENST00000576713 CST9LQ9H4G1 147 aa6.03□□□□□ -1.44
NPLOC4-219ENST00000576713 A0A087WZ39 114 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 HBDP02042 147 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 Q6ZN92 141 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 FAM19A2Q8N3H0 131 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 ORAOV1Q8WV07 137 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 CHAC1Q9BUX1 264 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 CDKN2A-AS1Q9UH64 79 aa6.02□□□□□ -1.45
NPLOC4-219ENST00000576713 GAGE10A6NGK3 116 aa6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 SERF1AO75920 110 aa6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 SPAG11BQ08648 103 aa6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 CIRBPQ14011 172 aaKnown RBP6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 C2orf88Q9BSF0 95 aa6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
NPLOC4-219ENST00000576713 A0A096LNI7 61 aa6□□□□□ -1.45
NPLOC4-219ENST00000576713 IGLV5-39A0A0G2JS06 123 aa6□□□□□ -1.45
NPLOC4-219ENST00000576713 G0S2P27469 103 aa6□□□□□ -1.45
NPLOC4-219ENST00000576713 SYCNQ0VAF6 134 aa6□□□□□ -1.45
NPLOC4-219ENST00000576713 CHCHD1Q96BP2 118 aaKnown RBP6□□□□□ -1.45
NPLOC4-219ENST00000576713 CARD19Q96LW7 228 aa6□□□□□ -1.45
NPLOC4-219ENST00000576713 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 RAB5BP61020 215 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 PMVKQ15126 192 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 C2orf82Q6UX34 121 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 BAGE3Q86Y29 109 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 OR10D4PQ8NGN7 298 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
NPLOC4-219ENST00000576713 IGLV5-45A0A087WSX0 123 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 IGKV2-24A0A0C4DH68 120 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 TINCRA0A1B0GVN0 87 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 SMIM1B2RUZ4 78 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BKO60814 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BJP06899 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BOP23527 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BBP33778 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BDP58876 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 KRTAP10-4P60372 401 aaPredicted RBP5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BCP62807 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST2H2BEQ16778 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 Q5VSD8 79 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BHQ93079 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 C2orf48Q96LS8 159 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BNQ99877 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 HIST1H2BMQ99879 126 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 C6orf48Q9UBA6 75 aa5.98□□□□□ -1.45
NPLOC4-219ENST00000576713 A0A087WYN8 130 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 LINC01549A6NIU2 74 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 EPM2AB3EWF7 344 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 APOMO95445 188 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 IGLC3P0DOY3 106 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 NDUFA6P56556 154 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 HERVK_113P63121 156 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 C9orf116Q5BN46 136 aaPredicted RBP5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 PAPPA-AS1Q5QFB9 102 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 LINC00469Q8N7U9 141 aa5.97□□□□□ -1.45
NPLOC4-219ENST00000576713 HERC1Q15751 4861 aa5.96□□□□□ -1.45
NPLOC4-219ENST00000576713 C11orf86A6NJI1 115 aa5.96□□□□□ -1.46
NPLOC4-219ENST00000576713 HSBP1O75506 76 aa5.96□□□□□ -1.46
NPLOC4-219ENST00000576713 SPINK8P0C7L1 97 aa5.96□□□□□ -1.46
NPLOC4-219ENST00000576713 ZNF22P17026 224 aaPredicted RBP5.96□□□□□ -1.46
NPLOC4-219ENST00000576713 LINC01561Q8N1V8 128 aa5.96□□□□□ -1.46
NPLOC4-219ENST00000576713 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
NPLOC4-219ENST00000576713 ATP5LO75964 103 aa5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 CTAG1AP78358 180 aa5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 Q6ZRP5 223 aa5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 IFI27L1Q96BM0 104 aa5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 MRPL35Q9NZE8 188 aaKnown RBP5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 TOMM7Q9P0U1 55 aa5.95□□□□□ -1.46
NPLOC4-219ENST00000576713 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
NPLOC4-219ENST00000576713 NDUFA1O15239 70 aa5.94□□□□□ -1.46
NPLOC4-219ENST00000576713 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
NPLOC4-219ENST00000576713 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
NPLOC4-219ENST00000576713 Q8IZM0 81 aa5.94□□□□□ -1.46
NPLOC4-219ENST00000576713 PLAC8Q9NZF1 115 aa5.94□□□□□ -1.46
NPLOC4-219ENST00000576713 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 FABP4P15090 132 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 HNRNPA3P51991 378 aaKnown RBP5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 SEC11AP67812 179 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 S100A12P80511 92 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 SERTAD4-AS1Q5TG53 156 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 STPG4Q8N801 248 aa5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 CHTOPQ9Y3Y2 248 aaKnown RBP5.93□□□□□ -1.46
NPLOC4-219ENST00000576713 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 H0Y8G0 127 aa5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 LEPROTL1O95214 131 aa5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 LINC00518Q8N0U6 118 aa5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 COX7B2Q8TF08 81 aa5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 PACRGQ96M98 296 aaPredicted RBP5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
NPLOC4-219ENST00000576713 TLX1NBP0CAT3 122 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms