RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 XCL1P47992 114 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 UBE2D1P51668 147 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 HERVK_113P63121 156 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-216ENST00000575599 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-216ENST00000575599 CHAC1Q9BUX1 264 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
RPAIN-216ENST00000575599 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
RPAIN-216ENST00000575599 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
RPAIN-216ENST00000575599 Q6ZSA8 131 aa8.6□□□□□ -1.03
RPAIN-216ENST00000575599 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
RPAIN-216ENST00000575599 EPM2AB3EWF7 344 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 H3BRM9 83 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 FOXI1Q12951 378 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 LINC00469Q8N7U9 141 aa8.59□□□□□ -1.03
RPAIN-216ENST00000575599 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 HERVK_113P61574 105 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 PYY3Q5JQD4 70 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 Q5VSD8 79 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 FAM19A3Q7Z5A8 133 aa8.58□□□□□ -1.04
RPAIN-216ENST00000575599 FAT1Q14517 4588 aa8.57□□□□□ -1.04
RPAIN-216ENST00000575599 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
RPAIN-216ENST00000575599 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
RPAIN-216ENST00000575599 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.56□□□□□ -1.04
RPAIN-216ENST00000575599 MALP21145 153 aa8.56□□□□□ -1.04
RPAIN-216ENST00000575599 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
RPAIN-216ENST00000575599 S100A12P80511 92 aa8.56□□□□□ -1.04
RPAIN-216ENST00000575599 CD164L2Q6UWJ8 174 aa8.56□□□□□ -1.04
RPAIN-216ENST00000575599 SLPIP03973 132 aa8.55□□□□□ -1.04
RPAIN-216ENST00000575599 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
RPAIN-216ENST00000575599 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-216ENST00000575599 COX6A2Q02221 97 aa8.55□□□□□ -1.04
RPAIN-216ENST00000575599 VAMP8Q9BV40 100 aa8.55□□□□□ -1.04
RPAIN-216ENST00000575599 GVQW2A0A096LPI5 108 aaPredicted RBP8.54□□□□□ -1.04
RPAIN-216ENST00000575599 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
RPAIN-216ENST00000575599 COX7A2LO14548 114 aa8.54□□□□□ -1.04
RPAIN-216ENST00000575599 C5orf38Q86SI9 138 aa8.54□□□□□ -1.04
RPAIN-216ENST00000575599 CDKN2A-AS1Q9UH64 79 aa8.54□□□□□ -1.04
RPAIN-216ENST00000575599 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
RPAIN-216ENST00000575599 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
RPAIN-216ENST00000575599 CIRBP-AS1Q8TBR5 109 aa8.53□□□□□ -1.04
RPAIN-216ENST00000575599 IGLV5-45A0A087WSX0 123 aa8.52□□□□□ -1.05
RPAIN-216ENST00000575599 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
RPAIN-216ENST00000575599 APOMO95445 188 aa8.52□□□□□ -1.05
RPAIN-216ENST00000575599 SPINK8P0C7L1 97 aa8.52□□□□□ -1.05
RPAIN-216ENST00000575599 STPG4Q8N801 248 aa8.52□□□□□ -1.05
RPAIN-216ENST00000575599 LINC00526Q96FQ7 95 aa8.52□□□□□ -1.05
RPAIN-216ENST00000575599 A0A087WZ39 114 aa8.51□□□□□ -1.05
RPAIN-216ENST00000575599 TMEM223A0PJW6 202 aa8.51□□□□□ -1.05
RPAIN-216ENST00000575599 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
RPAIN-216ENST00000575599 PAM16Q9Y3D7 125 aa8.51□□□□□ -1.05
RPAIN-216ENST00000575599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-216ENST00000575599 PANO1I0J062 215 aa8.5□□□□□ -1.05
RPAIN-216ENST00000575599 ZNF561-AS1K7EIQ3 104 aa8.5□□□□□ -1.05
RPAIN-216ENST00000575599 PRSS2P07478 247 aa8.5□□□□□ -1.05
RPAIN-216ENST00000575599 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
RPAIN-216ENST00000575599 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
RPAIN-216ENST00000575599 MAJINQ3KP22 176 aa8.49□□□□□ -1.05
RPAIN-216ENST00000575599 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
RPAIN-216ENST00000575599 C12orf57Q99622 126 aa8.49□□□□□ -1.05
RPAIN-216ENST00000575599 TOMM7Q9P0U1 55 aa8.49□□□□□ -1.05
RPAIN-216ENST00000575599 E9PLD3 99 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 CHTF8P0CG12 524 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
RPAIN-216ENST00000575599 NMUP48645 174 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 ORAOV1Q8WV07 137 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 CARD19Q96LW7 228 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 SMIM1B2RUZ4 78 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 LEPROTO15243 131 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 DPH3Q96FX2 82 aa8.48□□□□□ -1.05
RPAIN-216ENST00000575599 PLA2G1BP04054 148 aaKnown RBP8.47□□□□□ -1.05
RPAIN-216ENST00000575599 C6orf226Q5I0X4 101 aa8.47□□□□□ -1.05
RPAIN-216ENST00000575599 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
RPAIN-216ENST00000575599 IGKV2-24A0A0C4DH68 120 aa8.46□□□□□ -1.06
RPAIN-216ENST00000575599 J3QQQ9 107 aa8.46□□□□□ -1.06
RPAIN-216ENST00000575599 SPAG11BQ08648 103 aa8.46□□□□□ -1.06
RPAIN-216ENST00000575599 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
RPAIN-216ENST00000575599 LINC00518Q8N0U6 118 aa8.46□□□□□ -1.06
RPAIN-216ENST00000575599 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
RPAIN-216ENST00000575599 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
RPAIN-216ENST00000575599 CKS1BP61024 79 aa8.45□□□□□ -1.06
RPAIN-216ENST00000575599 CIRBPQ14011 172 aaKnown RBP8.45□□□□□ -1.06
RPAIN-216ENST00000575599 SPACA4Q8TDM5 124 aa8.45□□□□□ -1.06
RPAIN-216ENST00000575599 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
RPAIN-216ENST00000575599 C21orf62-AS1Q17RA5 79 aa8.44□□□□□ -1.06
RPAIN-216ENST00000575599 Q6ZRU5 148 aa8.44□□□□□ -1.06
RPAIN-216ENST00000575599 Q8IZM0 81 aa8.44□□□□□ -1.06
RPAIN-216ENST00000575599 A0A087WYN8 130 aa8.43□□□□□ -1.06
RPAIN-216ENST00000575599 A0A096LNI7 61 aa8.43□□□□□ -1.06
RPAIN-216ENST00000575599 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
RPAIN-216ENST00000575599 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 CXCL5P42830 114 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms