RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-207ENST00000572346 IGLC3P0DOY3 106 aa9.48□□□□□ -0.89
NPLOC4-207ENST00000572346 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
NPLOC4-207ENST00000572346 LINC01561Q8N1V8 128 aa9.48□□□□□ -0.89
NPLOC4-207ENST00000572346 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-207ENST00000572346 H3BRM9 83 aa9.47□□□□□ -0.89
NPLOC4-207ENST00000572346 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
NPLOC4-207ENST00000572346 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
NPLOC4-207ENST00000572346 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
NPLOC4-207ENST00000572346 F8VRH5 84 aa9.46□□□□□ -0.9
NPLOC4-207ENST00000572346 PANO1I0J062 215 aa9.46□□□□□ -0.9
NPLOC4-207ENST00000572346 PRSS2P07478 247 aa9.46□□□□□ -0.9
NPLOC4-207ENST00000572346 S100A2P29034 98 aa9.46□□□□□ -0.9
NPLOC4-207ENST00000572346 TOMM7Q9P0U1 55 aa9.46□□□□□ -0.9
NPLOC4-207ENST00000572346 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
NPLOC4-207ENST00000572346 C11orf86A6NJI1 115 aa9.45□□□□□ -0.9
NPLOC4-207ENST00000572346 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
NPLOC4-207ENST00000572346 SDIM1Q6ZPB5 146 aa9.45□□□□□ -0.9
NPLOC4-207ENST00000572346 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
NPLOC4-207ENST00000572346 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-207ENST00000572346 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-207ENST00000572346 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
NPLOC4-207ENST00000572346 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
NPLOC4-207ENST00000572346 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-207ENST00000572346 ODF1Q14990 250 aa9.43□□□□□ -0.9
NPLOC4-207ENST00000572346 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
NPLOC4-207ENST00000572346 CARD19Q96LW7 228 aa9.43□□□□□ -0.9
NPLOC4-207ENST00000572346 SLPIP03973 132 aa9.42□□□□□ -0.9
NPLOC4-207ENST00000572346 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
NPLOC4-207ENST00000572346 SMIM1B2RUZ4 78 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 F8WDY8 70 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 NDUFA1O15239 70 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 MT1HL1P0DM35 61 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 KRTDAPP60985 99 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 CKS1BP61024 79 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 SNRPEP62304 92 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 Q8IZM0 81 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 PMCHL2Q9BQD1 86 aa9.41□□□□□ -0.9
NPLOC4-207ENST00000572346 DPM2O94777 84 aa9.4□□□□□ -0.9
NPLOC4-207ENST00000572346 PLNP26678 52 aa9.4□□□□□ -0.9
NPLOC4-207ENST00000572346 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
NPLOC4-207ENST00000572346 Q6ZRU5 148 aa9.4□□□□□ -0.9
NPLOC4-207ENST00000572346 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
NPLOC4-207ENST00000572346 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
NPLOC4-207ENST00000572346 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
NPLOC4-207ENST00000572346 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
NPLOC4-207ENST00000572346 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
NPLOC4-207ENST00000572346 IGKCP01834 107 aa9.38□□□□□ -0.91
NPLOC4-207ENST00000572346 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
NPLOC4-207ENST00000572346 C20orf202A1L168 122 aa9.37□□□□□ -0.91
NPLOC4-207ENST00000572346 CXCL5P42830 114 aa9.37□□□□□ -0.91
NPLOC4-207ENST00000572346 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
NPLOC4-207ENST00000572346 HIST1H2BLQ99880 126 aa9.37□□□□□ -0.91
NPLOC4-207ENST00000572346 A0A087WYN8 130 aa9.36□□□□□ -0.91
NPLOC4-207ENST00000572346 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
NPLOC4-207ENST00000572346 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
NPLOC4-207ENST00000572346 HERVK_113P61574 105 aa9.36□□□□□ -0.91
NPLOC4-207ENST00000572346 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
NPLOC4-207ENST00000572346 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
NPLOC4-207ENST00000572346 C5orf52A6NGY3 159 aa9.35□□□□□ -0.91
NPLOC4-207ENST00000572346 RNF151Q2KHN1 245 aa9.35□□□□□ -0.91
NPLOC4-207ENST00000572346 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
NPLOC4-207ENST00000572346 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
NPLOC4-207ENST00000572346 TMA7Q9Y2S6 64 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-207ENST00000572346 TRBV30A0A0K0K1B3 111 aa9.34□□□□□ -0.91
NPLOC4-207ENST00000572346 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
NPLOC4-207ENST00000572346 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
NPLOC4-207ENST00000572346 C6orf48Q9UBA6 75 aa9.34□□□□□ -0.91
NPLOC4-207ENST00000572346 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
NPLOC4-207ENST00000572346 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-207ENST00000572346 GAGE2BQ13066 116 aa9.32□□□□□ -0.92
NPLOC4-207ENST00000572346 AKR1D1P51857 326 aa9.31□□□□□ -0.92
NPLOC4-207ENST00000572346 PLEKHB2Q96CS7 222 aa9.31□□□□□ -0.92
NPLOC4-207ENST00000572346 PLAC8Q9NZF1 115 aa9.31□□□□□ -0.92
NPLOC4-207ENST00000572346 LEPROTO15243 131 aa9.3□□□□□ -0.92
NPLOC4-207ENST00000572346 C9orf116Q5BN46 136 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-207ENST00000572346 SFTA2Q6UW10 78 aa9.3□□□□□ -0.92
NPLOC4-207ENST00000572346 A0A096LNI7 61 aa9.29□□□□□ -0.92
NPLOC4-207ENST00000572346 MAJINQ3KP22 176 aa9.29□□□□□ -0.92
NPLOC4-207ENST00000572346 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 LGALS3P17931 250 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 ZNF625Q96I27 306 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
NPLOC4-207ENST00000572346 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
NPLOC4-207ENST00000572346 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
NPLOC4-207ENST00000572346 ATOH7Q8N100 152 aa9.27□□□□□ -0.93
NPLOC4-207ENST00000572346 STPG4Q8N801 248 aa9.27□□□□□ -0.93
NPLOC4-207ENST00000572346 NDUFA12Q9UI09 145 aa9.27□□□□□ -0.93
NPLOC4-207ENST00000572346 MYMXA0A1B0GTQ4 84 aa9.26□□□□□ -0.93
NPLOC4-207ENST00000572346 E9PLD3 99 aa9.26□□□□□ -0.93
NPLOC4-207ENST00000572346 J3QQQ9 107 aa9.26□□□□□ -0.93
NPLOC4-207ENST00000572346 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
NPLOC4-207ENST00000572346 PFN2P35080 140 aa9.25□□□□□ -0.93
NPLOC4-207ENST00000572346 MEIG1Q5JSS6 88 aa9.25□□□□□ -0.93
NPLOC4-207ENST00000572346 Q6ZRP5 223 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms