RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 EIF5A2Q9GZV4 153 aaKnown RBP6.45□□□□□ -1.38
CHMP6-202ENST00000571457 NKAPP1Q8N9T2 125 aa6.44□□□□□ -1.38
CHMP6-202ENST00000571457 V9GYV3 84 aa6.44□□□□□ -1.38
CHMP6-202ENST00000571457 D6R8Y8 96 aa6.43□□□□□ -1.38
CHMP6-202ENST00000571457 PPBPP02775 128 aa6.43□□□□□ -1.38
CHMP6-202ENST00000571457 CXCL5P42830 114 aa6.43□□□□□ -1.38
CHMP6-202ENST00000571457 PNRC1Q12796 327 aaPredicted RBP6.43□□□□□ -1.38
CHMP6-202ENST00000571457 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
CHMP6-202ENST00000571457 SLC51BQ86UW2 128 aa6.43□□□□□ -1.38
CHMP6-202ENST00000571457 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
CHMP6-202ENST00000571457 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
CHMP6-202ENST00000571457 F8W036 122 aa6.42□□□□□ -1.38
CHMP6-202ENST00000571457 S100A8P05109 93 aa6.42□□□□□ -1.38
CHMP6-202ENST00000571457 FAM74A3Q4VXF1 159 aa6.42□□□□□ -1.38
CHMP6-202ENST00000571457 VCX2Q9H322 139 aa6.42□□□□□ -1.38
CHMP6-202ENST00000571457 A0A1B0GVG6 124 aa6.41□□□□□ -1.38
CHMP6-202ENST00000571457 NPYP01303 97 aa6.41□□□□□ -1.38
CHMP6-202ENST00000571457 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
CHMP6-202ENST00000571457 SEC11AP67812 179 aa6.41□□□□□ -1.38
CHMP6-202ENST00000571457 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
CHMP6-202ENST00000571457 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
CHMP6-202ENST00000571457 HERVK_113P63121 156 aa6.4□□□□□ -1.38
CHMP6-202ENST00000571457 BLOC1S1P78537 153 aa6.4□□□□□ -1.38
CHMP6-202ENST00000571457 PRLHP81277 87 aa6.4□□□□□ -1.38
CHMP6-202ENST00000571457 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.38
CHMP6-202ENST00000571457 NPSP0C0P6 89 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 FAM19A3Q7Z5A8 133 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 ORMDL3Q8N138 153 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 AMELXQ99217 191 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 GNB1LQ9BYB4 327 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 CYSLTR1Q9Y271 337 aa6.39□□□□□ -1.39
CHMP6-202ENST00000571457 SMIM27A0A1W2PRY6 76 aa6.38□□□□□ -1.39
CHMP6-202ENST00000571457 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
CHMP6-202ENST00000571457 BATF3Q9NR55 127 aa6.38□□□□□ -1.39
CHMP6-202ENST00000571457 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
CHMP6-202ENST00000571457 NDUFA12Q9UI09 145 aa6.38□□□□□ -1.39
CHMP6-202ENST00000571457 PAPPA-AS1Q5QFB9 102 aa6.37□□□□□ -1.39
CHMP6-202ENST00000571457 ZC2HC1BQ5TFG8 222 aa6.37□□□□□ -1.39
CHMP6-202ENST00000571457 TMEM136Q6ZRR5 245 aa6.37□□□□□ -1.39
CHMP6-202ENST00000571457 DAND5Q8N907 189 aa6.37□□□□□ -1.39
CHMP6-202ENST00000571457 TMEM126AQ9H061 195 aa6.37□□□□□ -1.39
CHMP6-202ENST00000571457 SPINK1P00995 79 aa6.36□□□□□ -1.39
CHMP6-202ENST00000571457 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
CHMP6-202ENST00000571457 MRPL54Q6P161 138 aaKnown RBP6.36□□□□□ -1.39
CHMP6-202ENST00000571457 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
CHMP6-202ENST00000571457 PRELID3AQ96N28 172 aa6.36□□□□□ -1.39
CHMP6-202ENST00000571457 RAB5BP61020 215 aa6.35□□□□□ -1.39
CHMP6-202ENST00000571457 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
CHMP6-202ENST00000571457 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 ADIRFQ15847 76 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 ORMDL2Q53FV1 153 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 FAM19A2Q8N3H0 131 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 Q8NBF4 154 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 HIGD2AQ9BW72 106 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 MAP1LC3AQ9H492 121 aa6.34□□□□□ -1.39
CHMP6-202ENST00000571457 ZNF706Q9Y5V0 76 aaPredicted RBP6.34□□□□□ -1.39
CHMP6-202ENST00000571457 LOC389332A0A1B0GUA5 103 aa6.33□□□□□ -1.4
CHMP6-202ENST00000571457 A0A1B0GXF2 115 aa6.33□□□□□ -1.4
CHMP6-202ENST00000571457 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
CHMP6-202ENST00000571457 SCO1O75880 301 aa6.33□□□□□ -1.4
CHMP6-202ENST00000571457 SRP19P09132 144 aaKnown RBP6.33□□□□□ -1.4
CHMP6-202ENST00000571457 RPL23P62829 140 aaKnown RBP6.33□□□□□ -1.4
CHMP6-202ENST00000571457 MT1HP80294 61 aa6.33□□□□□ -1.4
CHMP6-202ENST00000571457 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
CHMP6-202ENST00000571457 SMIM1B2RUZ4 78 aa6.32□□□□□ -1.4
CHMP6-202ENST00000571457 K7EMI3 77 aa6.32□□□□□ -1.4
CHMP6-202ENST00000571457 M0R378 163 aa6.32□□□□□ -1.4
CHMP6-202ENST00000571457 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
CHMP6-202ENST00000571457 XP32Q5T750 250 aa6.32□□□□□ -1.4
CHMP6-202ENST00000571457 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
CHMP6-202ENST00000571457 Q8N8P6 123 aa6.32□□□□□ -1.4
CHMP6-202ENST00000571457 ATP5LO75964 103 aa6.31□□□□□ -1.4
CHMP6-202ENST00000571457 G0S2P27469 103 aa6.31□□□□□ -1.4
CHMP6-202ENST00000571457 ATP5L2Q7Z4Y8 100 aa6.31□□□□□ -1.4
CHMP6-202ENST00000571457 NAT8Q9UHE5 227 aa6.31□□□□□ -1.4
CHMP6-202ENST00000571457 TCTE3Q8IZS6 198 aa6.3□□□□□ -1.4
CHMP6-202ENST00000571457 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
CHMP6-202ENST00000571457 VPREB1P12018 145 aa6.29□□□□□ -1.4
CHMP6-202ENST00000571457 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
CHMP6-202ENST00000571457 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
CHMP6-202ENST00000571457 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
CHMP6-202ENST00000571457 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
CHMP6-202ENST00000571457 IGLV5-45A0A087WSX0 123 aa6.28□□□□□ -1.4
CHMP6-202ENST00000571457 TINCRA0A1B0GVN0 87 aa6.28□□□□□ -1.4
CHMP6-202ENST00000571457 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
CHMP6-202ENST00000571457 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
CHMP6-202ENST00000571457 SLC25A20O43772 301 aa6.27□□□□□ -1.41
CHMP6-202ENST00000571457 PFN2P35080 140 aa6.27□□□□□ -1.41
CHMP6-202ENST00000571457 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
CHMP6-202ENST00000571457 SPINK8P0C7L1 97 aa6.26□□□□□ -1.41
CHMP6-202ENST00000571457 Q8N377 158 aa6.26□□□□□ -1.41
CHMP6-202ENST00000571457 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
CHMP6-202ENST00000571457 RAB14P61106 215 aa6.25□□□□□ -1.41
CHMP6-202ENST00000571457 COX17Q14061 63 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms