RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
COMMD4-218ENST00000567377 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
COMMD4-218ENST00000567377 CDKN2A-AS1Q9UH64 79 aa11.23□□□□□ -0.61
COMMD4-218ENST00000567377 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
COMMD4-218ENST00000567377 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
COMMD4-218ENST00000567377 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
COMMD4-218ENST00000567377 CXCL5P42830 114 aa11.21□□□□□ -0.61
COMMD4-218ENST00000567377 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.61
COMMD4-218ENST00000567377 SNAPINO95295 136 aa11.2□□□□□ -0.62
COMMD4-218ENST00000567377 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
COMMD4-218ENST00000567377 F8VRH5 84 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 ODF1Q14990 250 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 PMVKQ15126 192 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 SVBPQ8N300 66 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 LINC00469Q8N7U9 141 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 CST9LQ9H4G1 147 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 TRAPPC1Q9Y5R8 145 aa11.19□□□□□ -0.62
COMMD4-218ENST00000567377 IGLV5-45A0A087WSX0 123 aa11.18□□□□□ -0.62
COMMD4-218ENST00000567377 APOC3P02656 99 aa11.18□□□□□ -0.62
COMMD4-218ENST00000567377 C1orf137Q5JT78 98 aa11.18□□□□□ -0.62
COMMD4-218ENST00000567377 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-218ENST00000567377 FAM168BA1KXE4 195 aa11.16□□□□□ -0.62
COMMD4-218ENST00000567377 RAB5BP61020 215 aa11.16□□□□□ -0.62
COMMD4-218ENST00000567377 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
COMMD4-218ENST00000567377 M0QXV9 152 aa11.15□□□□□ -0.62
COMMD4-218ENST00000567377 LINC00614P0C842 121 aa11.15□□□□□ -0.62
COMMD4-218ENST00000567377 H3BRM9 83 aa11.14□□□□□ -0.63
COMMD4-218ENST00000567377 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
COMMD4-218ENST00000567377 C18orf32Q8TCD1 76 aa11.14□□□□□ -0.63
COMMD4-218ENST00000567377 HMCN2Q8NDA2 5059 aa11.13□□□□□ -0.63
COMMD4-218ENST00000567377 IGLV7-43P04211 117 aa11.13□□□□□ -0.63
COMMD4-218ENST00000567377 UBE2BP63146 152 aa11.13□□□□□ -0.63
COMMD4-218ENST00000567377 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
COMMD4-218ENST00000567377 DIRC1Q969H9 104 aa11.13□□□□□ -0.63
COMMD4-218ENST00000567377 KRTAP10-8P60410 259 aa11.12□□□□□ -0.63
COMMD4-218ENST00000567377 HBDP02042 147 aa11.11□□□□□ -0.63
COMMD4-218ENST00000567377 LBHQ53QV2 105 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-218ENST00000567377 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
COMMD4-218ENST00000567377 TNXBP22105 4242 aa11.1□□□□□ -0.63
COMMD4-218ENST00000567377 ATP5LO75964 103 aa11.09□□□□□ -0.63
COMMD4-218ENST00000567377 IGLC3P0DOY3 106 aa11.09□□□□□ -0.63
COMMD4-218ENST00000567377 TP73-AS1Q9UF72 201 aa11.09□□□□□ -0.63
COMMD4-218ENST00000567377 A0A096LNJ9 63 aa11.08□□□□□ -0.64
COMMD4-218ENST00000567377 SPINK8P0C7L1 97 aa11.07□□□□□ -0.64
COMMD4-218ENST00000567377 NDUFA6P56556 154 aa11.07□□□□□ -0.64
COMMD4-218ENST00000567377 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
COMMD4-218ENST00000567377 XAGE1AQ9HD64 81 aa11.07□□□□□ -0.64
COMMD4-218ENST00000567377 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
COMMD4-218ENST00000567377 H0Y9J4 135 aa11.06□□□□□ -0.64
COMMD4-218ENST00000567377 NUPR1O60356 82 aa11.06□□□□□ -0.64
COMMD4-218ENST00000567377 KRTAP11-1Q8IUC1 163 aa11.06□□□□□ -0.64
COMMD4-218ENST00000567377 IGLV5-39A0A0G2JS06 123 aa11.05□□□□□ -0.64
COMMD4-218ENST00000567377 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
COMMD4-218ENST00000567377 CHCHD1Q96BP2 118 aaKnown RBP11.04□□□□□ -0.64
COMMD4-218ENST00000567377 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
COMMD4-218ENST00000567377 BAGE3Q86Y29 109 aa11.03□□□□□ -0.64
COMMD4-218ENST00000567377 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
COMMD4-218ENST00000567377 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.65
COMMD4-218ENST00000567377 PMCHL1Q16048 86 aa11.01□□□□□ -0.65
COMMD4-218ENST00000567377 ZNF861PO60384 105 aa11□□□□□ -0.65
COMMD4-218ENST00000567377 COX17Q14061 63 aa11□□□□□ -0.65
COMMD4-218ENST00000567377 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
COMMD4-218ENST00000567377 IGLV5-37A0A075B6J1 123 aa10.99□□□□□ -0.65
COMMD4-218ENST00000567377 TRAV12-1A0A0B4J245 112 aa10.98□□□□□ -0.65
COMMD4-218ENST00000567377 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
COMMD4-218ENST00000567377 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
COMMD4-218ENST00000567377 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
COMMD4-218ENST00000567377 CHTOPQ9Y3Y2 248 aaKnown RBP10.97□□□□□ -0.65
COMMD4-218ENST00000567377 RPL28P46779 137 aaKnown RBP10.96□□□□□ -0.65
COMMD4-218ENST00000567377 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
COMMD4-218ENST00000567377 LINC00167Q96N53 147 aa10.96□□□□□ -0.65
COMMD4-218ENST00000567377 BCE1O60756 84 aa10.95□□□□□ -0.66
COMMD4-218ENST00000567377 RPL13AP40429 203 aaKnown RBP10.95□□□□□ -0.66
COMMD4-218ENST00000567377 ERG28Q9UKR5 140 aa10.95□□□□□ -0.66
COMMD4-218ENST00000567377 HSBP1O75506 76 aa10.94□□□□□ -0.66
COMMD4-218ENST00000567377 PFN2P35080 140 aa10.94□□□□□ -0.66
COMMD4-218ENST00000567377 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
COMMD4-218ENST00000567377 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
COMMD4-218ENST00000567377 RPL24P83731 157 aaKnown RBP10.93□□□□□ -0.66
COMMD4-218ENST00000567377 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
COMMD4-218ENST00000567377 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
COMMD4-218ENST00000567377 SND1-IT1Q9HBX3 110 aa10.91□□□□□ -0.66
COMMD4-218ENST00000567377 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
COMMD4-218ENST00000567377 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.66
COMMD4-218ENST00000567377 UBR4Q5T4S7 5183 aa10.89□□□□□ -0.67
COMMD4-218ENST00000567377 TRGC2P03986 189 aa10.89□□□□□ -0.67
COMMD4-218ENST00000567377 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
COMMD4-218ENST00000567377 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
COMMD4-218ENST00000567377 VPREB1P12018 145 aa10.87□□□□□ -0.67
COMMD4-218ENST00000567377 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
COMMD4-218ENST00000567377 LEPROTL1O95214 131 aa10.85□□□□□ -0.67
COMMD4-218ENST00000567377 UBE2AP49459 152 aa10.85□□□□□ -0.67
COMMD4-218ENST00000567377 LINC00158P58513 81 aa10.85□□□□□ -0.67
COMMD4-218ENST00000567377 HERV-K104P63124 156 aa10.85□□□□□ -0.67
COMMD4-218ENST00000567377 LRP2P98164 4655 aa10.84□□□□□ -0.67
COMMD4-218ENST00000567377 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
COMMD4-218ENST00000567377 SLC7A5P1Q8MH63 180 aa10.84□□□□□ -0.67
COMMD4-218ENST00000567377 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
COMMD4-218ENST00000567377 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms