RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, human

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-205	ENST00000566215		K7ERJ3	54 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	PPP1R17	O96001	155 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	UBE2D3	P61077	147 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	UBE2D2	P62837	147 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	C7orf33	Q8WU49	177 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	SCGB3A1	Q96QR1	104 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	C14orf178	Q8N769	122 aa	Predicted RBP	3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	BAALC	Q8WXS3	180 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	RPL39L	Q96EH5	51 aa	Known RBP	3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	PHLDA3	Q9Y5J5	127 aa		3.86	□□□□□ -1.79
UBE3A-205	ENST00000566215	MYMX	A0A1B0GTQ4	84 aa		3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	C2orf66	Q6UXQ4	117 aa		3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	DAZ3	Q9NR90	486 aa	Known RBP	3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	LINC01549	A6NIU2	74 aa		3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	S100A4	P26447	101 aa	Known RBP	3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	POLR2K	P53803	58 aa	Known RBP	3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	ENHO	Q6UWT2	76 aa		3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215	DNAJC30	Q96LL9	226 aa		3.85	□□□□□ -1.79
UBE3A-205	ENST00000566215		F8W1H4	67 aa		3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	GNRH2	O43555	120 aa		3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	IGLV1-50	A0A075B6I6	118 aa		3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	IGIP	A6NJ69	53 aa		3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	TSHB	P01222	138 aa		3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	FUS	P35637	526 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	HIST1H4G	Q99525	98 aa		3.84	□□□□□ -1.79
UBE3A-205	ENST00000566215	IGLV4-69	A0A075B6H9	119 aa		3.84	□□□□□ -1.8
UBE3A-205	ENST00000566215		H7C423	109 aa		3.84	□□□□□ -1.8
UBE3A-205	ENST00000566215	C1orf43	Q9BWL3	253 aa		3.84	□□□□□ -1.8
UBE3A-205	ENST00000566215	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.84	□□□□□ -1.8
UBE3A-205	ENST00000566215	PRO0461	Q9UI25	63 aa		3.84	□□□□□ -1.8
UBE3A-205	ENST00000566215	TRBV6-5	A0A0K0K1A5	114 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	HTN1	P15515	57 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	UBE2D1	P51668	147 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	TRBV27	A0A0K0K1C4	114 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	LOC100131303	A0A0U1RQF7	123 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	MGP	P08493	103 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	PAPPA-AS1	Q5QFB9	102 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	DAZ4	Q86SG3	579 aa	Known RBP	3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	TIMM17A	Q99595	171 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	CYSLTR1	Q9Y271	337 aa		3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	3.83	□□□□□ -1.8
UBE3A-205	ENST00000566215	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	TRBV6-8	A0A0A6YYG3	113 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	USP17L23	D6RBM5	183 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	SUMO4	Q6EEV6	95 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	C11orf86	A6NJI1	115 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215		H3BMG7	143 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	VCY	O14598	125 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	PMVK	Q15126	192 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	TMEM141	Q96I45	108 aa		3.82	□□□□□ -1.8
UBE3A-205	ENST00000566215	ZNF815P	A8K554	130 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	IGHV3-30	P01768	117 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	IGHV3-33	P01772	117 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	IGHV3-30-3	P0DP02	117 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	IGHV3-30-5	P0DP03	117 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	RPL24	P83731	157 aa	Known RBP	3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	ZNF876P	Q49A33	203 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	PLEKHB2	Q96CS7	222 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	JPT2	Q9H910	190 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215		Q6ZRP5	223 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	AMELX	Q99217	191 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	SDHAF1	A6NFY7	115 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	RPL39	P62891	51 aa	Known RBP	3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	LINC01620	Q4KN68	170 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	GAGE13	Q4V321	117 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215	KIR2DL4	Q99706	377 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215		Q9HAA7	133 aa		3.81	□□□□□ -1.8
UBE3A-205	ENST00000566215		M0QY20	66 aa		3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215	HERVK_113	P61574	105 aa		3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215	SCGB1A1	P11684	91 aa		3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215	TSPEAR-AS2	P59090	65 aa		3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215	RPL36A	P83881	106 aa	Known RBP	3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215	ETDB	Q3ZM63	59 aa		3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215	RPL36AL	Q969Q0	106 aa	Known RBP	3.8	□□□□□ -1.8
UBE3A-205	ENST00000566215		A0A087WWL8	130 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215		J3QR89	54 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	TSPAN13	O95857	204 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	SMCP	P49901	116 aa	Predicted RBP	3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	HAMP	P81172	84 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	SCGB1D4	Q6XE38	83 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	IGKV2D-24	A0A075B6R9	120 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215		A4D1N5	150 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	GAGE12H	A6NDE8	117 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	RPL13A	P40429	203 aa	Known RBP	3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	LINC00526	Q96FQ7	95 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215	CRP	P02741	224 aa		3.79	□□□□□ -1.8
UBE3A-205	ENST00000566215		A0A087WYN8	130 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215		F5H697	171 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215	C20orf203	Q8NBC4	194 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215	SIGMAR1	Q99720	223 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215	TMEM223	A0PJW6	202 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215		J3QQQ9	107 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215	CFC1B	P0CG36	223 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215	CFC1	P0CG37	223 aa		3.78	□□□□□ -1.8
UBE3A-205	ENST00000566215	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.77	□□□□□ -1.81
UBE3A-205	ENST00000566215	LEPROT	O15243	131 aa		3.77	□□□□□ -1.81
UBE3A-205	ENST00000566215	FOXI1	Q12951	378 aa		3.77	□□□□□ -1.81
UBE3A-205	ENST00000566215	LYRM7	Q5U5X0	104 aa		3.77	□□□□□ -1.81
UBE3A-205	ENST00000566215	FAM104A	Q969W3	186 aa		3.77	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms