RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 DEFB4AO15263 64 aa13.84□□□□□ -0.19
MSLN-205ENST00000563941 C6orf226Q5I0X4 101 aa13.84□□□□□ -0.19
MSLN-205ENST00000563941 FAM240AA0A1B0GVK7 77 aa13.83□□□□□ -0.2
MSLN-205ENST00000563941 C15orf53Q8NAA6 179 aa13.82□□□□□ -0.2
MSLN-205ENST00000563941 HIVEP1P15822 2718 aa13.82□□□□□ -0.2
MSLN-205ENST00000563941 BAALC-AS2P0C853 105 aa13.81□□□□□ -0.2
MSLN-205ENST00000563941 APOC4P55056 127 aa13.81□□□□□ -0.2
MSLN-205ENST00000563941 IGHV4-28A0A0C4DH34 117 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 GAGE2BQ13066 116 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 GAGE2EQ4V326 116 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 Q8IZM0 81 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 SMIM11BQ8TCY0 68 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 GAGE2DQ9UEU5 116 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 VWFP04275 2813 aa13.8□□□□□ -0.2
MSLN-205ENST00000563941 NBEAL2Q6ZNJ1 2754 aa13.79□□□□□ -0.2
MSLN-205ENST00000563941 DAD1P61803 113 aa13.78□□□□□ -0.2
MSLN-205ENST00000563941 LINC01561Q8N1V8 128 aa13.78□□□□□ -0.2
MSLN-205ENST00000563941 LINC00269Q8N2A0 174 aa13.78□□□□□ -0.2
MSLN-205ENST00000563941 MRPL23Q16540 153 aaKnown RBP13.77□□□□□ -0.21
MSLN-205ENST00000563941 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
MSLN-205ENST00000563941 Q9HAA7 133 aa13.77□□□□□ -0.21
MSLN-205ENST00000563941 C22orf24Q9Y442 160 aa13.76□□□□□ -0.21
MSLN-205ENST00000563941 Q6Q795 121 aa13.75□□□□□ -0.21
MSLN-205ENST00000563941 CELA1Q9UNI1 258 aa13.75□□□□□ -0.21
MSLN-205ENST00000563941 Q8N3U1 123 aa13.75□□□□□ -0.21
MSLN-205ENST00000563941 ANAPC13Q9BS18 74 aa13.75□□□□□ -0.21
MSLN-205ENST00000563941 CD164L2Q6UWJ8 174 aa13.74□□□□□ -0.21
MSLN-205ENST00000563941 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
MSLN-205ENST00000563941 A0A087WYN8 130 aa13.73□□□□□ -0.21
MSLN-205ENST00000563941 ANGP03950 147 aaKnown RBP13.73□□□□□ -0.21
MSLN-205ENST00000563941 Q8NAQ8 132 aa13.73□□□□□ -0.21
MSLN-205ENST00000563941 ATP5G1P05496 136 aa13.73□□□□□ -0.21
MSLN-205ENST00000563941 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
MSLN-205ENST00000563941 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
MSLN-205ENST00000563941 H0YGX0 51 aa13.72□□□□□ -0.21
MSLN-205ENST00000563941 ACYP1P07311 99 aa13.72□□□□□ -0.21
MSLN-205ENST00000563941 MIFP14174 115 aa13.72□□□□□ -0.21
MSLN-205ENST00000563941 MALP21145 153 aa13.72□□□□□ -0.21
MSLN-205ENST00000563941 REG3AQ06141 175 aa13.72□□□□□ -0.21
MSLN-205ENST00000563941 TENM1Q9UKZ4 2725 aa13.71□□□□□ -0.21
MSLN-205ENST00000563941 IGLV10-54A0A075B6I4 117 aa13.71□□□□□ -0.21
MSLN-205ENST00000563941 DNAL4O96015 105 aa13.71□□□□□ -0.21
MSLN-205ENST00000563941 KIAA0087Q14695 138 aa13.71□□□□□ -0.21
MSLN-205ENST00000563941 CFAP161Q6P656 301 aa13.7□□□□□ -0.22
MSLN-205ENST00000563941 NDUFV3P56181 108 aaKnown RBP13.69□□□□□ -0.22
MSLN-205ENST00000563941 CXCL5P42830 114 aa13.68□□□□□ -0.22
MSLN-205ENST00000563941 SPART-AS1P0CW21 52 aa13.67□□□□□ -0.22
MSLN-205ENST00000563941 HTN3P15516 51 aa13.67□□□□□ -0.22
MSLN-205ENST00000563941 INAFM2P0DMQ5 153 aa13.67□□□□□ -0.22
MSLN-205ENST00000563941 NHLRC4P0CG21 123 aaPredicted RBP13.66□□□□□ -0.22
MSLN-205ENST00000563941 LECT2O14960 151 aa13.66□□□□□ -0.22
MSLN-205ENST00000563941 COX17Q14061 63 aa13.66□□□□□ -0.22
MSLN-205ENST00000563941 IGHV4-30-4P0DP06 118 aa13.65□□□□□ -0.22
MSLN-205ENST00000563941 FLNBO75369 2602 aaKnown RBP13.64□□□□□ -0.23
MSLN-205ENST00000563941 LELP1Q5T871 98 aa13.64□□□□□ -0.23
MSLN-205ENST00000563941 SMCR5Q8TEV8 140 aa13.64□□□□□ -0.23
MSLN-205ENST00000563941 TRBV7-7A0A0K0K1E9 115 aa13.63□□□□□ -0.23
MSLN-205ENST00000563941 WFDC9Q8NEX5 89 aa13.63□□□□□ -0.23
MSLN-205ENST00000563941 ATRQ13535 2644 aa13.63□□□□□ -0.23
MSLN-205ENST00000563941 PRR3P79522 188 aaKnown RBP13.63□□□□□ -0.23
MSLN-205ENST00000563941 NDUFC2O95298 119 aa13.62□□□□□ -0.23
MSLN-205ENST00000563941 C9orf116Q5BN46 136 aaPredicted RBP13.62□□□□□ -0.23
MSLN-205ENST00000563941 TEP1Q99973 2627 aaKnown RBP13.61□□□□□ -0.23
MSLN-205ENST00000563941 GAGE2AQ6NT46 116 aa13.61□□□□□ -0.23
MSLN-205ENST00000563941 WIPF1O43516 503 aa13.6□□□□□ -0.23
MSLN-205ENST00000563941 NANOS2P60321 138 aaKnown RBP13.6□□□□□ -0.23
MSLN-205ENST00000563941 C9orf129Q5T035 196 aaKnown RBP13.6□□□□□ -0.23
MSLN-205ENST00000563941 SDIM1Q6ZPB5 146 aa13.59□□□□□ -0.23
MSLN-205ENST00000563941 SLPIP03973 132 aa13.58□□□□□ -0.23
MSLN-205ENST00000563941 LINC00643Q86TS7 51 aa13.58□□□□□ -0.23
MSLN-205ENST00000563941 KLK5Q9Y337 293 aaPredicted RBP13.58□□□□□ -0.24
MSLN-205ENST00000563941 SPAG11BQ08648 103 aa13.57□□□□□ -0.24
MSLN-205ENST00000563941 OBSCN-AS1Q96MR7 158 aa13.57□□□□□ -0.24
MSLN-205ENST00000563941 KLK12Q9UKR0 248 aa13.57□□□□□ -0.24
MSLN-205ENST00000563941 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
MSLN-205ENST00000563941 C14orf132Q9NPU4 83 aa13.57□□□□□ -0.24
MSLN-205ENST00000563941 PRR34Q9NV39 138 aa13.57□□□□□ -0.24
MSLN-205ENST00000563941 C6orf223Q8N319 242 aa13.56□□□□□ -0.24
MSLN-205ENST00000563941 C10orf25Q5T742 122 aa13.55□□□□□ -0.24
MSLN-205ENST00000563941 ORMDL1Q9P0S3 153 aa13.55□□□□□ -0.24
MSLN-205ENST00000563941 UNQ6190/PRO20217Q6UXQ8 127 aa13.55□□□□□ -0.24
MSLN-205ENST00000563941 Q8NDZ9 215 aa13.55□□□□□ -0.24
MSLN-205ENST00000563941 IMUPQ9GZP8 106 aa13.55□□□□□ -0.24
MSLN-205ENST00000563941 NCR3O14931 201 aa13.54□□□□□ -0.24
MSLN-205ENST00000563941 F8P00451 2351 aa13.54□□□□□ -0.24
MSLN-205ENST00000563941 TRRAPQ9Y4A5 3859 aa13.54□□□□□ -0.24
MSLN-205ENST00000563941 ENHOQ6UWT2 76 aa13.53□□□□□ -0.24
MSLN-205ENST00000563941 LINC00526Q96FQ7 95 aa13.53□□□□□ -0.24
MSLN-205ENST00000563941 LINC00167Q96N53 147 aa13.53□□□□□ -0.24
MSLN-205ENST00000563941 LYPD5Q6UWN5 251 aa13.52□□□□□ -0.24
MSLN-205ENST00000563941 A0A1B0GX51 115 aa13.52□□□□□ -0.25
MSLN-205ENST00000563941 CYSRT1A8MQ03 144 aa13.51□□□□□ -0.25
MSLN-205ENST00000563941 Q8N814 137 aa13.51□□□□□ -0.25
MSLN-205ENST00000563941 A0A0J9YWU9 116 aa13.5□□□□□ -0.25
MSLN-205ENST00000563941 CCDC179H3BU77 68 aa13.5□□□□□ -0.25
MSLN-205ENST00000563941 MUC7Q8TAX7 377 aa13.49□□□□□ -0.25
MSLN-205ENST00000563941 S100A7L2Q5SY68 101 aa13.49□□□□□ -0.25
MSLN-205ENST00000563941 FAM236AA0A1B0GUQ0 79 aa13.48□□□□□ -0.25
MSLN-205ENST00000563941 FAM236BA0A1B0GV22 79 aa13.48□□□□□ -0.25
MSLN-205ENST00000563941 C6orf99Q4VX62 202 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms