RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PRSS2P07478 247 aa7.92□□□□□ -1.14
SLIRP-211ENST00000557623 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
SLIRP-211ENST00000557623 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
SLIRP-211ENST00000557623 STPG4Q8N801 248 aa7.92□□□□□ -1.14
SLIRP-211ENST00000557623 CHCHD1Q96BP2 118 aaKnown RBP7.92□□□□□ -1.14
SLIRP-211ENST00000557623 A0A096LNJ9 63 aa7.91□□□□□ -1.14
SLIRP-211ENST00000557623 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
SLIRP-211ENST00000557623 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
SLIRP-211ENST00000557623 ATP5LO75964 103 aa7.91□□□□□ -1.14
SLIRP-211ENST00000557623 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
SLIRP-211ENST00000557623 GAGE2BQ13066 116 aa7.91□□□□□ -1.14
SLIRP-211ENST00000557623 CDKN2A-AS1Q9UH64 79 aa7.91□□□□□ -1.14
SLIRP-211ENST00000557623 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
SLIRP-211ENST00000557623 RPL18AQ02543 176 aaKnown RBP7.9□□□□□ -1.14
SLIRP-211ENST00000557623 Q8IZM0 81 aa7.9□□□□□ -1.14
SLIRP-211ENST00000557623 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
SLIRP-211ENST00000557623 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
SLIRP-211ENST00000557623 FAT1Q14517 4588 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 TRGC2P03986 189 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 NDUFA6P56556 154 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 CKS1BP61024 79 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 PDZD11Q5EBL8 140 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 UNQ6190/PRO20217Q6UXQ8 127 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
SLIRP-211ENST00000557623 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
SLIRP-211ENST00000557623 BAGE3Q86Y29 109 aa7.88□□□□□ -1.15
SLIRP-211ENST00000557623 COLCA2A8K830 154 aa7.87□□□□□ -1.15
SLIRP-211ENST00000557623 H3BRM9 83 aa7.87□□□□□ -1.15
SLIRP-211ENST00000557623 HSBP1O75506 76 aa7.87□□□□□ -1.15
SLIRP-211ENST00000557623 CXCL5P42830 114 aa7.87□□□□□ -1.15
SLIRP-211ENST00000557623 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-211ENST00000557623 C2orf82Q6UX34 121 aa7.87□□□□□ -1.15
SLIRP-211ENST00000557623 ABCA13Q86UQ4 5058 aa7.87□□□□□ -1.15
SLIRP-211ENST00000557623 PCLOQ9Y6V0 5065 aa7.86□□□□□ -1.15
SLIRP-211ENST00000557623 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
SLIRP-211ENST00000557623 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
SLIRP-211ENST00000557623 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 NDUFC2-KCTD14E9PQ53 114 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 F8VRH5 84 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-211ENST00000557623 LCE4AQ5TA78 99 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 Q6ZRP5 223 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 COX7B2Q8TF08 81 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
SLIRP-211ENST00000557623 A0A1W2PNN7 141 aa7.83□□□□□ -1.16
SLIRP-211ENST00000557623 SPINK8P0C7L1 97 aa7.83□□□□□ -1.16
SLIRP-211ENST00000557623 GAGE2EQ4V326 116 aa7.83□□□□□ -1.16
SLIRP-211ENST00000557623 GAGE2DQ9UEU5 116 aa7.83□□□□□ -1.16
SLIRP-211ENST00000557623 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
SLIRP-211ENST00000557623 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-211ENST00000557623 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
SLIRP-211ENST00000557623 SCO1O75880 301 aa7.81□□□□□ -1.16
SLIRP-211ENST00000557623 SERF1AO75920 110 aa7.81□□□□□ -1.16
SLIRP-211ENST00000557623 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
SLIRP-211ENST00000557623 FAM19A2Q8N3H0 131 aa7.81□□□□□ -1.16
SLIRP-211ENST00000557623 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
SLIRP-211ENST00000557623 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
SLIRP-211ENST00000557623 LEPROTL1O95214 131 aa7.8□□□□□ -1.16
SLIRP-211ENST00000557623 TMEM170BQ5T4T1 132 aa7.8□□□□□ -1.16
SLIRP-211ENST00000557623 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
SLIRP-211ENST00000557623 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
SLIRP-211ENST00000557623 HSPB8Q9UJY1 196 aa7.79□□□□□ -1.16
SLIRP-211ENST00000557623 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
SLIRP-211ENST00000557623 KRTAP29-1A8MX34 341 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-211ENST00000557623 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
SLIRP-211ENST00000557623 HNRNPA3P51991 378 aaKnown RBP7.77□□□□□ -1.17
SLIRP-211ENST00000557623 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
SLIRP-211ENST00000557623 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
SLIRP-211ENST00000557623 PHF5AQ7RTV0 110 aaKnown RBP7.77□□□□□ -1.17
SLIRP-211ENST00000557623 FAM19A5Q7Z5A7 132 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-211ENST00000557623 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-211ENST00000557623 OXTP01178 125 aa7.76□□□□□ -1.17
SLIRP-211ENST00000557623 TMEM223A0PJW6 202 aa7.75□□□□□ -1.17
SLIRP-211ENST00000557623 H0Y8G0 127 aa7.75□□□□□ -1.17
SLIRP-211ENST00000557623 M0QXV9 152 aa7.75□□□□□ -1.17
SLIRP-211ENST00000557623 NUPR1O60356 82 aa7.75□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BKO60814 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BJP06899 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 FABP4P15090 132 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BOP23527 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BBP33778 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BDP58876 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BCP62807 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 ODF1Q14990 250 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST2H2BEQ16778 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BHQ93079 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BNQ99877 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 HIST1H2BMQ99879 126 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
SLIRP-211ENST00000557623 KRTAP9-7A8MTY7 169 aa7.73□□□□□ -1.17
SLIRP-211ENST00000557623 COX17Q14061 63 aa7.73□□□□□ -1.17
SLIRP-211ENST00000557623 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
SLIRP-211ENST00000557623 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
SLIRP-211ENST00000557623 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms