RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 A0A1W2PNN7 141 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 OXTP01178 125 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 LINC00614P0C842 121 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 NDUFA6P56556 154 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 RAB5BP61020 215 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 PRR3P79522 188 aaKnown RBP6.67□□□□□ -1.34
SHMT2-213ENST00000554600 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 CDKN2A-AS1Q9UH64 79 aa6.67□□□□□ -1.34
SHMT2-213ENST00000554600 PMVKQ15126 192 aa6.66□□□□□ -1.34
SHMT2-213ENST00000554600 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
SHMT2-213ENST00000554600 TINCRA0A1B0GVN0 87 aa6.65□□□□□ -1.34
SHMT2-213ENST00000554600 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
SHMT2-213ENST00000554600 PMCHL1Q16048 86 aa6.65□□□□□ -1.34
SHMT2-213ENST00000554600 Q6ZRP5 223 aa6.65□□□□□ -1.34
SHMT2-213ENST00000554600 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
SHMT2-213ENST00000554600 Q8IZM0 81 aa6.65□□□□□ -1.34
SHMT2-213ENST00000554600 CST9LQ9H4G1 147 aa6.65□□□□□ -1.34
SHMT2-213ENST00000554600 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
SHMT2-213ENST00000554600 HBDP02042 147 aa6.64□□□□□ -1.35
SHMT2-213ENST00000554600 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
SHMT2-213ENST00000554600 URB1-AS1Q96HZ7 61 aa6.64□□□□□ -1.35
SHMT2-213ENST00000554600 FAM168BA1KXE4 195 aa6.63□□□□□ -1.35
SHMT2-213ENST00000554600 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
SHMT2-213ENST00000554600 SPINK8P0C7L1 97 aa6.63□□□□□ -1.35
SHMT2-213ENST00000554600 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
SHMT2-213ENST00000554600 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
SHMT2-213ENST00000554600 COLCA2A8K830 154 aa6.62□□□□□ -1.35
SHMT2-213ENST00000554600 SMIM1B2RUZ4 78 aa6.62□□□□□ -1.35
SHMT2-213ENST00000554600 H3BRM9 83 aa6.62□□□□□ -1.35
SHMT2-213ENST00000554600 TRGC2P03986 189 aa6.62□□□□□ -1.35
SHMT2-213ENST00000554600 PDZD11Q5EBL8 140 aa6.62□□□□□ -1.35
SHMT2-213ENST00000554600 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
SHMT2-213ENST00000554600 A0A096LNJ9 63 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 F8VRH5 84 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 ATP5LO75964 103 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 CXCL5P42830 114 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 BAGE3Q86Y29 109 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
SHMT2-213ENST00000554600 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
SHMT2-213ENST00000554600 M0QXV9 152 aa6.6□□□□□ -1.35
SHMT2-213ENST00000554600 UBE2BP63146 152 aa6.6□□□□□ -1.35
SHMT2-213ENST00000554600 XAGE1AQ9HD64 81 aa6.6□□□□□ -1.35
SHMT2-213ENST00000554600 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
SHMT2-213ENST00000554600 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
SHMT2-213ENST00000554600 REG3GQ6UW15 175 aa6.59□□□□□ -1.35
SHMT2-213ENST00000554600 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
SHMT2-213ENST00000554600 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
SHMT2-213ENST00000554600 HSBP1O75506 76 aa6.58□□□□□ -1.36
SHMT2-213ENST00000554600 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
SHMT2-213ENST00000554600 TMEM170BQ5T4T1 132 aa6.57□□□□□ -1.36
SHMT2-213ENST00000554600 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
SHMT2-213ENST00000554600 SERTAD4-AS1Q5TG53 156 aa6.56□□□□□ -1.36
SHMT2-213ENST00000554600 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
SHMT2-213ENST00000554600 FAM19A2Q8N3H0 131 aa6.56□□□□□ -1.36
SHMT2-213ENST00000554600 IFI27L1Q96BM0 104 aa6.56□□□□□ -1.36
SHMT2-213ENST00000554600 CHTOPQ9Y3Y2 248 aaKnown RBP6.56□□□□□ -1.36
SHMT2-213ENST00000554600 SERF1AO75920 110 aa6.55□□□□□ -1.36
SHMT2-213ENST00000554600 SRSF9Q13242 221 aaKnown RBP eCLIP6.55□□□□□ -1.36
SHMT2-213ENST00000554600 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
SHMT2-213ENST00000554600 H0Y8G0 127 aa6.54□□□□□ -1.36
SHMT2-213ENST00000554600 IGLV7-43P04211 117 aa6.54□□□□□ -1.36
SHMT2-213ENST00000554600 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
SHMT2-213ENST00000554600 PFN2P35080 140 aa6.54□□□□□ -1.36
SHMT2-213ENST00000554600 LBHQ53QV2 105 aaPredicted RBP6.54□□□□□ -1.36
SHMT2-213ENST00000554600 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
SHMT2-213ENST00000554600 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
SHMT2-213ENST00000554600 TRAV12-1A0A0B4J245 112 aa6.53□□□□□ -1.36
SHMT2-213ENST00000554600 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
SHMT2-213ENST00000554600 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
SHMT2-213ENST00000554600 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
SHMT2-213ENST00000554600 LEPROTL1O95214 131 aa6.52□□□□□ -1.37
SHMT2-213ENST00000554600 S100A6P06703 90 aa6.52□□□□□ -1.37
SHMT2-213ENST00000554600 LINC00310P59036 64 aa6.52□□□□□ -1.37
SHMT2-213ENST00000554600 NKAPP1Q8N9T2 125 aa6.52□□□□□ -1.37
SHMT2-213ENST00000554600 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.37
SHMT2-213ENST00000554600 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
SHMT2-213ENST00000554600 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
SHMT2-213ENST00000554600 NUPR1O60356 82 aa6.51□□□□□ -1.37
SHMT2-213ENST00000554600 MRPL55Q7Z7F7 128 aaKnown RBP6.51□□□□□ -1.37
SHMT2-213ENST00000554600 HSPB8Q9UJY1 196 aa6.51□□□□□ -1.37
SHMT2-213ENST00000554600 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BKO60814 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BJP06899 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 FABP4P15090 132 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BOP23527 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BBP33778 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BDP58876 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BCP62807 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST2H2BEQ16778 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BHQ93079 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BNQ99877 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 HIST1H2BMQ99879 126 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
SHMT2-213ENST00000554600 TMEM223A0PJW6 202 aa6.49□□□□□ -1.37
SHMT2-213ENST00000554600 RPL37AP8A6NKH3 93 aa6.49□□□□□ -1.37
SHMT2-213ENST00000554600 H0Y9J4 135 aa6.49□□□□□ -1.37
SHMT2-213ENST00000554600 LINC00167Q96N53 147 aa6.49□□□□□ -1.37
SHMT2-213ENST00000554600 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms