RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 VCANP13611 3396 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 IGKV2-28A0A075B6P5 120 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 IGKV2D-28P01615 120 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 H0Y9P7 68 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 GYPEP15421 78 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 FAM215AQ9Y5M1 114 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 TTC28Q96AY4 2481 aa6.36□□□□□ -1.39
GTF2A1-203ENST00000553612 SLURP1P55000 103 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 IBA57-AS1B1ANH7 110 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 LENEPQ9Y5L5 61 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 SPG11Q96JI7 2443 aa6.35□□□□□ -1.39
GTF2A1-203ENST00000553612 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
GTF2A1-203ENST00000553612 SPATA3Q8NHX4 192 aa6.34□□□□□ -1.39
GTF2A1-203ENST00000553612 CAMK2N2Q96S95 79 aa6.34□□□□□ -1.39
GTF2A1-203ENST00000553612 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
GTF2A1-203ENST00000553612 Q6ZQT0 140 aa6.34□□□□□ -1.39
GTF2A1-203ENST00000553612 REG3GQ6UW15 175 aa6.34□□□□□ -1.39
GTF2A1-203ENST00000553612 USMG5Q96IX5 58 aa6.34□□□□□ -1.4
GTF2A1-203ENST00000553612 Q8N9W7 124 aa6.33□□□□□ -1.4
GTF2A1-203ENST00000553612 C10orf25Q5T742 122 aa6.33□□□□□ -1.4
GTF2A1-203ENST00000553612 Q5VV11 94 aa6.33□□□□□ -1.4
GTF2A1-203ENST00000553612 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
GTF2A1-203ENST00000553612 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
GTF2A1-203ENST00000553612 CCL19Q99731 98 aa6.32□□□□□ -1.4
GTF2A1-203ENST00000553612 TRBV7-4A0A0J9YYF1 115 aa6.32□□□□□ -1.4
GTF2A1-203ENST00000553612 MINOS1-NBL1R4GNA1 71 aa6.32□□□□□ -1.4
GTF2A1-203ENST00000553612 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
GTF2A1-203ENST00000553612 C11orf71Q6IPW1 123 aa6.32□□□□□ -1.4
GTF2A1-203ENST00000553612 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 Q8NA96 180 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 MUC4Q99102 2169 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 H3BQ85 93 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 IGLV1-44P01699 117 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 CSPG4Q6UVK1 2322 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 MOBPQ13875 183 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 THSD7BQ9C0I4 1608 aa6.31□□□□□ -1.4
GTF2A1-203ENST00000553612 M0R2N4 97 aa6.3□□□□□ -1.4
GTF2A1-203ENST00000553612 COA5Q86WW8 74 aa6.3□□□□□ -1.4
GTF2A1-203ENST00000553612 OTOGLQ3ZCN5 2332 aa6.3□□□□□ -1.4
GTF2A1-203ENST00000553612 CELSR3Q9NYQ7 3312 aa6.3□□□□□ -1.4
GTF2A1-203ENST00000553612 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
GTF2A1-203ENST00000553612 Q6ZSN1 163 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 K7EQG2 157 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 CSAG1Q6PB30 78 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 COX8CQ7Z4L0 72 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 VPS13AQ96RL7 3174 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 Q6ZTC4 211 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 CGB3P0DN86 165 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 CGB7P0DN87 165 aa6.29□□□□□ -1.4
GTF2A1-203ENST00000553612 C9orf66Q5T8R8 295 aa6.28□□□□□ -1.4
GTF2A1-203ENST00000553612 REV3LO60673 3130 aa6.28□□□□□ -1.4
GTF2A1-203ENST00000553612 ZNF462Q96JM2 2506 aa6.28□□□□□ -1.4
GTF2A1-203ENST00000553612 IGLV1-47P01700 117 aa6.27□□□□□ -1.41
GTF2A1-203ENST00000553612 ERC2-IT1O76042 136 aa6.27□□□□□ -1.41
GTF2A1-203ENST00000553612 C10orf99Q6UWK7 81 aa6.27□□□□□ -1.41
GTF2A1-203ENST00000553612 LINC00476Q8WZB0 136 aa6.27□□□□□ -1.41
GTF2A1-203ENST00000553612 CPAMD8Q8IZJ3 1885 aa6.26□□□□□ -1.41
GTF2A1-203ENST00000553612 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.26□□□□□ -1.41
GTF2A1-203ENST00000553612 CHCHD7Q9BUK0 85 aa6.26□□□□□ -1.41
GTF2A1-203ENST00000553612 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
GTF2A1-203ENST00000553612 GPR179Q6PRD1 2367 aa6.25□□□□□ -1.41
GTF2A1-203ENST00000553612 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
GTF2A1-203ENST00000553612 IGLV4-60A0A075B6I1 120 aa6.25□□□□□ -1.41
GTF2A1-203ENST00000553612 A0A1B0GU69 56 aa6.25□□□□□ -1.41
GTF2A1-203ENST00000553612 ZNF702PQ9H963 129 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 LY6G6EA0A0G2JKS1 128 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 EPM2AB3EWF7 344 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 SPINK1P00995 79 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 ZFP36P26651 326 aaKnown RBP6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 U3KQA8 63 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 EP400Q96L91 3159 aa6.24□□□□□ -1.41
GTF2A1-203ENST00000553612 C10orf142B7Z368 130 aa6.23□□□□□ -1.41
GTF2A1-203ENST00000553612 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
GTF2A1-203ENST00000553612 B4DSR2 109 aa6.23□□□□□ -1.41
GTF2A1-203ENST00000553612 C5orf56Q8N8D9 126 aa6.22□□□□□ -1.41
GTF2A1-203ENST00000553612 RNF223E7ERA6 249 aa6.22□□□□□ -1.41
GTF2A1-203ENST00000553612 BRCA2P51587 3418 aa6.22□□□□□ -1.41
GTF2A1-203ENST00000553612 RAI1Q7Z5J4 1906 aaPredicted RBP6.22□□□□□ -1.41
GTF2A1-203ENST00000553612 PRRC2CQ9Y520 2896 aaKnown RBP6.21□□□□□ -1.41
GTF2A1-203ENST00000553612 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.41
GTF2A1-203ENST00000553612 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.42
GTF2A1-203ENST00000553612 UNQ6190/PRO20217Q6UXQ8 127 aa6.21□□□□□ -1.42
GTF2A1-203ENST00000553612 CDC42SE2Q9NRR3 84 aa6.21□□□□□ -1.42
GTF2A1-203ENST00000553612 SZT2Q5T011 3432 aa6.21□□□□□ -1.42
GTF2A1-203ENST00000553612 PTPN13Q12923 2485 aa6.2□□□□□ -1.42
GTF2A1-203ENST00000553612 LOC110117498A0A087WWA1 95 aa6.2□□□□□ -1.42
GTF2A1-203ENST00000553612 A6NN06 94 aa6.2□□□□□ -1.42
GTF2A1-203ENST00000553612 K7ERS5 55 aa6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 Q75L30 129 aa6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 SPINK7P58062 85 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms