RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
CDK4-215ENST00000553237 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
CDK4-215ENST00000553237 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
CDK4-215ENST00000553237 A0A096LNJ9 63 aa9.81□□□□□ -0.84
CDK4-215ENST00000553237 RAB5BP61020 215 aa9.81□□□□□ -0.84
CDK4-215ENST00000553237 GAGE2EQ4V326 116 aa9.81□□□□□ -0.84
CDK4-215ENST00000553237 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
CDK4-215ENST00000553237 GAGE2DQ9UEU5 116 aa9.81□□□□□ -0.84
CDK4-215ENST00000553237 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
CDK4-215ENST00000553237 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
CDK4-215ENST00000553237 PMCHL1Q16048 86 aa9.8□□□□□ -0.84
CDK4-215ENST00000553237 PSORS1C2Q9UIG4 136 aa9.8□□□□□ -0.84
CDK4-215ENST00000553237 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
CDK4-215ENST00000553237 PMVKQ15126 192 aa9.79□□□□□ -0.84
CDK4-215ENST00000553237 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
CDK4-215ENST00000553237 C2orf82Q6UX34 121 aa9.79□□□□□ -0.84
CDK4-215ENST00000553237 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
CDK4-215ENST00000553237 HBDP02042 147 aa9.78□□□□□ -0.84
CDK4-215ENST00000553237 ODF1Q14990 250 aa9.78□□□□□ -0.84
CDK4-215ENST00000553237 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
CDK4-215ENST00000553237 PACRGQ96M98 296 aaPredicted RBP9.78□□□□□ -0.84
CDK4-215ENST00000553237 TOMM7Q9P0U1 55 aa9.78□□□□□ -0.84
CDK4-215ENST00000553237 TNXBP22105 4242 aa9.77□□□□□ -0.85
CDK4-215ENST00000553237 PRSS2P07478 247 aa9.77□□□□□ -0.85
CDK4-215ENST00000553237 C1orf137Q5JT78 98 aa9.77□□□□□ -0.85
CDK4-215ENST00000553237 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
CDK4-215ENST00000553237 TRGC2P03986 189 aa9.76□□□□□ -0.85
CDK4-215ENST00000553237 NDUFA6P56556 154 aa9.76□□□□□ -0.85
CDK4-215ENST00000553237 PDZD11Q5EBL8 140 aa9.76□□□□□ -0.85
CDK4-215ENST00000553237 C6orf226Q5I0X4 101 aa9.76□□□□□ -0.85
CDK4-215ENST00000553237 TRBV30A0A0K0K1B3 111 aa9.75□□□□□ -0.85
CDK4-215ENST00000553237 CHCHD1Q96BP2 118 aaKnown RBP9.75□□□□□ -0.85
CDK4-215ENST00000553237 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
CDK4-215ENST00000553237 KRTAP10-8P60410 259 aa9.74□□□□□ -0.85
CDK4-215ENST00000553237 CKS1BP61024 79 aa9.74□□□□□ -0.85
CDK4-215ENST00000553237 KRTAP11-1Q8IUC1 163 aa9.74□□□□□ -0.85
CDK4-215ENST00000553237 Q8IZM0 81 aa9.74□□□□□ -0.85
CDK4-215ENST00000553237 COLCA2A8K830 154 aa9.73□□□□□ -0.85
CDK4-215ENST00000553237 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
CDK4-215ENST00000553237 ATP5LO75964 103 aa9.73□□□□□ -0.85
CDK4-215ENST00000553237 BAGE3Q86Y29 109 aa9.73□□□□□ -0.85
CDK4-215ENST00000553237 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
CDK4-215ENST00000553237 NDUFC2-KCTD14E9PQ53 114 aa9.72□□□□□ -0.85
CDK4-215ENST00000553237 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.85
CDK4-215ENST00000553237 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
CDK4-215ENST00000553237 IGLC3P0DOY3 106 aa9.71□□□□□ -0.86
CDK4-215ENST00000553237 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
CDK4-215ENST00000553237 H3BRM9 83 aa9.7□□□□□ -0.86
CDK4-215ENST00000553237 M0QXV9 152 aa9.7□□□□□ -0.86
CDK4-215ENST00000553237 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
CDK4-215ENST00000553237 HSBP1O75506 76 aa9.69□□□□□ -0.86
CDK4-215ENST00000553237 SCO1O75880 301 aa9.69□□□□□ -0.86
CDK4-215ENST00000553237 UBE2BP63146 152 aa9.69□□□□□ -0.86
CDK4-215ENST00000553237 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
CDK4-215ENST00000553237 COX7B2Q8TF08 81 aa9.69□□□□□ -0.86
CDK4-215ENST00000553237 F8VRH5 84 aa9.68□□□□□ -0.86
CDK4-215ENST00000553237 CXCL5P42830 114 aa9.68□□□□□ -0.86
CDK4-215ENST00000553237 IFI27L1Q96BM0 104 aa9.68□□□□□ -0.86
CDK4-215ENST00000553237 ZNF22P17026 224 aaPredicted RBP9.67□□□□□ -0.86
CDK4-215ENST00000553237 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
CDK4-215ENST00000553237 C11orf86A6NJI1 115 aa9.66□□□□□ -0.86
CDK4-215ENST00000553237 SERF1AO75920 110 aa9.66□□□□□ -0.86
CDK4-215ENST00000553237 LINC00310P59036 64 aa9.66□□□□□ -0.86
CDK4-215ENST00000553237 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
CDK4-215ENST00000553237 CHTOPQ9Y3Y2 248 aaKnown RBP9.66□□□□□ -0.86
CDK4-215ENST00000553237 IGLV5-39A0A0G2JS06 123 aa9.65□□□□□ -0.86
CDK4-215ENST00000553237 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
CDK4-215ENST00000553237 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
CDK4-215ENST00000553237 H0Y9J4 135 aa9.63□□□□□ -0.87
CDK4-215ENST00000553237 NUPR1O60356 82 aa9.63□□□□□ -0.87
CDK4-215ENST00000553237 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
CDK4-215ENST00000553237 PRR26Q8N8Z3 221 aa9.62□□□□□ -0.87
CDK4-215ENST00000553237 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
CDK4-215ENST00000553237 H0Y8G0 127 aa9.6□□□□□ -0.87
CDK4-215ENST00000553237 FABP4P15090 132 aa9.59□□□□□ -0.87
CDK4-215ENST00000553237 LBHQ53QV2 105 aaPredicted RBP9.59□□□□□ -0.87
CDK4-215ENST00000553237 HIST1H2BKO60814 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BJP06899 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BOP23527 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BBP33778 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BDP58876 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BCP62807 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST2H2BEQ16778 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BHQ93079 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BNQ99877 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HIST1H2BMQ99879 126 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
CDK4-215ENST00000553237 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
CDK4-215ENST00000553237 LRP2P98164 4655 aa9.57□□□□□ -0.88
CDK4-215ENST00000553237 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
CDK4-215ENST00000553237 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
CDK4-215ENST00000553237 ZNF861PO60384 105 aa9.55□□□□□ -0.88
CDK4-215ENST00000553237 PFN2P35080 140 aa9.55□□□□□ -0.88
CDK4-215ENST00000553237 ZNF625Q96I27 306 aaPredicted RBP9.55□□□□□ -0.88
CDK4-215ENST00000553237 GAGE10A6NGK3 116 aa9.54□□□□□ -0.88
CDK4-215ENST00000553237 TP73-AS1Q9UF72 201 aa9.54□□□□□ -0.88
CDK4-215ENST00000553237 IGLV1-50A0A075B6I6 118 aa9.53□□□□□ -0.88
CDK4-215ENST00000553237 RPL37AP8A6NKH3 93 aa9.53□□□□□ -0.88
CDK4-215ENST00000553237 SFTA2Q6UW10 78 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms