RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 NPYP01303 97 aa7.21□□□□□ -1.26
VPS29-211ENST00000553128 TAGLN2P37802 199 aaKnown RBP7.21□□□□□ -1.26
VPS29-211ENST00000553128 Q6ZN92 141 aa7.21□□□□□ -1.26
VPS29-211ENST00000553128 LINC01551Q86U37 167 aa7.21□□□□□ -1.26
VPS29-211ENST00000553128 TMEM141Q96I45 108 aa7.21□□□□□ -1.26
VPS29-211ENST00000553128 ALKBH7Q9BT30 221 aaPredicted RBP7.21□□□□□ -1.26
VPS29-211ENST00000553128 V9GYV3 84 aa7.21□□□□□ -1.26
VPS29-211ENST00000553128 LINC00862A6NCI5 91 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 D6R8Y8 96 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 F8VRH5 84 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 TMEM250H0YL14 139 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 PLEKHB2Q96CS7 222 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 EIF5A2Q9GZV4 153 aaKnown RBP7.2□□□□□ -1.26
VPS29-211ENST00000553128 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
VPS29-211ENST00000553128 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
VPS29-211ENST00000553128 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
VPS29-211ENST00000553128 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
VPS29-211ENST00000553128 BATF3Q9NR55 127 aa7.19□□□□□ -1.26
VPS29-211ENST00000553128 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
VPS29-211ENST00000553128 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
VPS29-211ENST00000553128 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
VPS29-211ENST00000553128 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
VPS29-211ENST00000553128 DAND5Q8N907 189 aa7.18□□□□□ -1.26
VPS29-211ENST00000553128 USH2AO75445 5202 aa7.17□□□□□ -1.26
VPS29-211ENST00000553128 XP32Q5T750 250 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 NKAPP1Q8N9T2 125 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 AMELXQ99217 191 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 SMIM7Q9BQ49 75 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 TMEM126AQ9H061 195 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 CDKN2A-AS1Q9UH64 79 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 SSPOA2VEC9 5147 aa7.16□□□□□ -1.26
VPS29-211ENST00000553128 Q8NBF4 154 aa7.15□□□□□ -1.26
VPS29-211ENST00000553128 C2orf88Q9BSF0 95 aa7.15□□□□□ -1.26
VPS29-211ENST00000553128 NAT8BQ9UHF3 227 aa7.15□□□□□ -1.26
VPS29-211ENST00000553128 RAB5AP20339 215 aa7.14□□□□□ -1.27
VPS29-211ENST00000553128 RAB5BP61020 215 aa7.14□□□□□ -1.27
VPS29-211ENST00000553128 FAM74A3Q4VXF1 159 aa7.14□□□□□ -1.27
VPS29-211ENST00000553128 FAM19A3Q7Z5A8 133 aa7.14□□□□□ -1.27
VPS29-211ENST00000553128 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
VPS29-211ENST00000553128 M0R378 163 aa7.13□□□□□ -1.27
VPS29-211ENST00000553128 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
VPS29-211ENST00000553128 SPRR4Q96PI1 79 aa7.13□□□□□ -1.27
VPS29-211ENST00000553128 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
VPS29-211ENST00000553128 VCX2Q9H322 139 aa7.12□□□□□ -1.27
VPS29-211ENST00000553128 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
VPS29-211ENST00000553128 RGS21Q2M5E4 152 aa7.11□□□□□ -1.27
VPS29-211ENST00000553128 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
VPS29-211ENST00000553128 LOC389332A0A1B0GUA5 103 aa7.1□□□□□ -1.27
VPS29-211ENST00000553128 SMIM1B2RUZ4 78 aa7.1□□□□□ -1.27
VPS29-211ENST00000553128 CXCL5P42830 114 aa7.1□□□□□ -1.27
VPS29-211ENST00000553128 Q8NDZ9 215 aa7.1□□□□□ -1.27
VPS29-211ENST00000553128 A0A1B0GXF2 115 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 IGIPA6NJ69 53 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 SPINK1P00995 79 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 VPREB1P12018 145 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 HERVK_113P63121 156 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 Q8N377 158 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 COX7B2Q8TF08 81 aa7.09□□□□□ -1.27
VPS29-211ENST00000553128 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 A0A1B0GW15 77 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 RPL23P62829 140 aaKnown RBP7.08□□□□□ -1.28
VPS29-211ENST00000553128 TMEM136Q6ZRR5 245 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 ORMDL3Q8N138 153 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 GNB1LQ9BYB4 327 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 CYSLTR1Q9Y271 337 aa7.08□□□□□ -1.28
VPS29-211ENST00000553128 F8W036 122 aa7.07□□□□□ -1.28
VPS29-211ENST00000553128 PPBPP02775 128 aa7.07□□□□□ -1.28
VPS29-211ENST00000553128 SRP19P09132 144 aaKnown RBP7.07□□□□□ -1.28
VPS29-211ENST00000553128 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
VPS29-211ENST00000553128 GEMIN7Q9H840 131 aaKnown RBP7.07□□□□□ -1.28
VPS29-211ENST00000553128 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
VPS29-211ENST00000553128 M0R2T5 61 aa7.06□□□□□ -1.28
VPS29-211ENST00000553128 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
VPS29-211ENST00000553128 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
VPS29-211ENST00000553128 ADIRFQ15847 76 aa7.05□□□□□ -1.28
VPS29-211ENST00000553128 ALKAL2Q6UX46 152 aa7.05□□□□□ -1.28
VPS29-211ENST00000553128 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
VPS29-211ENST00000553128 PFN2P35080 140 aa7.04□□□□□ -1.28
VPS29-211ENST00000553128 SEC11AP67812 179 aa7.04□□□□□ -1.28
VPS29-211ENST00000553128 BLOC1S1P78537 153 aa7.04□□□□□ -1.28
VPS29-211ENST00000553128 PDZD11Q5EBL8 140 aa7.04□□□□□ -1.28
VPS29-211ENST00000553128 NPSP0C0P6 89 aa7.03□□□□□ -1.28
VPS29-211ENST00000553128 SPINK8P0C7L1 97 aa7.03□□□□□ -1.28
VPS29-211ENST00000553128 Q8N8P6 123 aa7.03□□□□□ -1.28
VPS29-211ENST00000553128 SND1-IT1Q9HBX3 110 aa7.03□□□□□ -1.28
VPS29-211ENST00000553128 A6NJY4 79 aa7.02□□□□□ -1.29
VPS29-211ENST00000553128 S100A8P05109 93 aa7.02□□□□□ -1.29
VPS29-211ENST00000553128 RAB14P61106 215 aa7.02□□□□□ -1.29
VPS29-211ENST00000553128 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.29
VPS29-211ENST00000553128 FAM19A2Q8N3H0 131 aa7.01□□□□□ -1.29
VPS29-211ENST00000553128 ZNF706Q9Y5V0 76 aaPredicted RBP7.01□□□□□ -1.29
VPS29-211ENST00000553128 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
VPS29-211ENST00000553128 C9JQL5 133 aa7□□□□□ -1.29
VPS29-211ENST00000553128 MOBPQ13875 183 aa7□□□□□ -1.29
VPS29-211ENST00000553128 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
VPS29-211ENST00000553128 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
VPS29-211ENST00000553128 SLC25A20O43772 301 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms