RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 VCYO14598 125 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 HMGB3O15347 200 aaKnown RBP3.23□□□□□ -1.89
LINC02406-201ENST00000553029 IFNA1P01562 189 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 CXCL1P09341 107 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 ARL14EPLP0DKL9 152 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 LGALS3P17931 250 aaKnown RBP3.23□□□□□ -1.89
LINC02406-201ENST00000553029 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 RPS29P62273 56 aaKnown RBP3.23□□□□□ -1.89
LINC02406-201ENST00000553029 TAL2Q16559 108 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 RBM38Q9H0Z9 239 aaKnown RBP3.23□□□□□ -1.89
LINC02406-201ENST00000553029 CDC42SE2Q9NRR3 84 aa3.23□□□□□ -1.89
LINC02406-201ENST00000553029 K7ERU9 68 aa3.22□□□□□ -1.89
LINC02406-201ENST00000553029 SLC25A20O43772 301 aa3.22□□□□□ -1.89
LINC02406-201ENST00000553029 GIPP09681 153 aaPredicted RBP3.22□□□□□ -1.89
LINC02406-201ENST00000553029 SNRPEP62304 92 aaKnown RBP3.22□□□□□ -1.89
LINC02406-201ENST00000553029 LYZL1Q6UWQ5 148 aa3.22□□□□□ -1.89
LINC02406-201ENST00000553029 SIGMAR1Q99720 223 aa3.22□□□□□ -1.89
LINC02406-201ENST00000553029 SPANXA1Q9NS26 97 aa3.22□□□□□ -1.89
LINC02406-201ENST00000553029 ZFP30Q9Y2G7 519 aa3.22□□□□□ -1.89
LINC02406-201ENST00000553029 TRBV30A0A0K0K1B3 111 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 C20orf202A1L168 122 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 C9orf92A6NGG3 77 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 RPL37AP8A6NKH3 93 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 M0R143 59 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 PRLHP81277 87 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 C9orf62Q8N4C0 152 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 TOMM5Q8N4H5 51 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 MARVELD1Q9BSK0 173 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 CYTL1Q9NRR1 136 aa3.21□□□□□ -1.9
LINC02406-201ENST00000553029 SPANXB1Q9NS25 103 aaPredicted RBP3.21□□□□□ -1.9
LINC02406-201ENST00000553029 TRAV13-1A0A0B4J241 112 aa3.2□□□□□ -1.9
LINC02406-201ENST00000553029 PEX7O00628 323 aa3.2□□□□□ -1.9
LINC02406-201ENST00000553029 GCHFRP30047 84 aa3.2□□□□□ -1.9
LINC02406-201ENST00000553029 OR13C6PQ8NH95 151 aa3.2□□□□□ -1.9
LINC02406-201ENST00000553029 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
LINC02406-201ENST00000553029 MAP1LC3AQ9H492 121 aa3.2□□□□□ -1.9
LINC02406-201ENST00000553029 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 FAM74A7A6NL05 159 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 ATP5LO75964 103 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 UBE2G1P62253 170 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
LINC02406-201ENST00000553029 UBE2V1Q13404 147 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 FAM74A3Q4VXF1 159 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 DEDD2Q8WXF8 326 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 PLEKHB2Q96CS7 222 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 LINC00167Q96N53 147 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 XAGE1AQ9HD64 81 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 TMEM167BQ9NRX6 74 aa3.19□□□□□ -1.9
LINC02406-201ENST00000553029 A0A1W2PRE2 83 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 ZNF727A8MUV8 499 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 NDUFB6O95139 128 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 TEX261Q6UWH6 196 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 SCGB1C1Q8TD33 95 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 HIST1H2BAQ96A08 127 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 FMC1Q96HJ9 113 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
LINC02406-201ENST00000553029 SDHAF1A6NFY7 115 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 LTAP01374 205 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 FOXA3P55318 350 aaPredicted RBP3.17□□□□□ -1.9
LINC02406-201ENST00000553029 RAB5BP61020 215 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 C4orf26Q17RF5 130 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 RNASE13Q5GAN3 156 aaKnown RBP3.17□□□□□ -1.9
LINC02406-201ENST00000553029 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 SPRR4Q96PI1 79 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 GNB1LQ9BYB4 327 aa3.17□□□□□ -1.9
LINC02406-201ENST00000553029 C7orf77A4D0Y5 90 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 MAP1LC3B2A6NCE7 125 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 I3L3M4 83 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 UPK1BO75841 260 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
LINC02406-201ENST00000553029 KIAA0087Q14695 138 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 C2orf82Q6UX34 121 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 CBLN2Q8IUK8 224 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 GATD1Q8NB37 220 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
LINC02406-201ENST00000553029 SNHG12Q9BXW3 62 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 MAP1LC3BQ9GZQ8 125 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 CST9LQ9H4G1 147 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 TMEM242Q9NWH2 141 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
LINC02406-201ENST00000553029 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 CXorf1O96002 111 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 IGLV6-57P01721 117 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 CD164Q04900 197 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 IL15RAQ13261 267 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 C1orf195Q5TG92 126 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 FA2HQ7L5A8 372 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 HIGD2AQ9BW72 106 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 Q9H521 79 aa3.15□□□□□ -1.91
LINC02406-201ENST00000553029 ZNF706Q9Y5V0 76 aaPredicted RBP3.15□□□□□ -1.91
LINC02406-201ENST00000553029 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
LINC02406-201ENST00000553029 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms