RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SPACA4Q8TDM5 124 aa11.05□□□□□ -0.64
CDK4-208ENST00000551706 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
CDK4-208ENST00000551706 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
CDK4-208ENST00000551706 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
CDK4-208ENST00000551706 PANO1I0J062 215 aa11.04□□□□□ -0.64
CDK4-208ENST00000551706 PRSS2P07478 247 aa11.04□□□□□ -0.64
CDK4-208ENST00000551706 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
CDK4-208ENST00000551706 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
CDK4-208ENST00000551706 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
CDK4-208ENST00000551706 A0A096LNI7 61 aa11.02□□□□□ -0.65
CDK4-208ENST00000551706 IGKV2-24A0A0C4DH68 120 aa11.02□□□□□ -0.65
CDK4-208ENST00000551706 Q8IZM0 81 aa11.02□□□□□ -0.65
CDK4-208ENST00000551706 A0A087WYN8 130 aa11.01□□□□□ -0.65
CDK4-208ENST00000551706 H3BRM9 83 aa11.01□□□□□ -0.65
CDK4-208ENST00000551706 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
CDK4-208ENST00000551706 MAJINQ3KP22 176 aa11.01□□□□□ -0.65
CDK4-208ENST00000551706 C6orf226Q5I0X4 101 aa11.01□□□□□ -0.65
CDK4-208ENST00000551706 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
CDK4-208ENST00000551706 TOMM7Q9P0U1 55 aa11.01□□□□□ -0.65
CDK4-208ENST00000551706 TRBV30A0A0K0K1B3 111 aa11□□□□□ -0.65
CDK4-208ENST00000551706 SERF1AO75920 110 aa11□□□□□ -0.65
CDK4-208ENST00000551706 PLA2G1BP04054 148 aaKnown RBP11□□□□□ -0.65
CDK4-208ENST00000551706 CKS1BP61024 79 aa11□□□□□ -0.65
CDK4-208ENST00000551706 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
CDK4-208ENST00000551706 IFI27L1Q96BM0 104 aa11□□□□□ -0.65
CDK4-208ENST00000551706 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
CDK4-208ENST00000551706 PLA2G2DQ9UNK4 145 aa11□□□□□ -0.65
CDK4-208ENST00000551706 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
CDK4-208ENST00000551706 PTTG1IPP53801 180 aa10.99□□□□□ -0.65
CDK4-208ENST00000551706 C10orf25Q5T742 122 aa10.99□□□□□ -0.65
CDK4-208ENST00000551706 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
CDK4-208ENST00000551706 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
CDK4-208ENST00000551706 S100A2P29034 98 aa10.98□□□□□ -0.65
CDK4-208ENST00000551706 CXCL5P42830 114 aa10.98□□□□□ -0.65
CDK4-208ENST00000551706 SNRPEP62304 92 aaKnown RBP10.98□□□□□ -0.65
CDK4-208ENST00000551706 RPL18AQ02543 176 aaKnown RBP10.98□□□□□ -0.65
CDK4-208ENST00000551706 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
CDK4-208ENST00000551706 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
CDK4-208ENST00000551706 TRAV12-1A0A0B4J245 112 aa10.97□□□□□ -0.65
CDK4-208ENST00000551706 C5orf52A6NGY3 159 aa10.97□□□□□ -0.65
CDK4-208ENST00000551706 LINC00310P59036 64 aa10.97□□□□□ -0.65
CDK4-208ENST00000551706 C2orf82Q6UX34 121 aa10.97□□□□□ -0.65
CDK4-208ENST00000551706 STPG4Q8N801 248 aa10.97□□□□□ -0.65
CDK4-208ENST00000551706 LEPROTL1O95214 131 aa10.96□□□□□ -0.65
CDK4-208ENST00000551706 CHTOPQ9Y3Y2 248 aaKnown RBP10.96□□□□□ -0.65
CDK4-208ENST00000551706 SPINK8P0C7L1 97 aa10.95□□□□□ -0.66
CDK4-208ENST00000551706 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
CDK4-208ENST00000551706 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
CDK4-208ENST00000551706 HSPB8Q9UJY1 196 aa10.95□□□□□ -0.66
CDK4-208ENST00000551706 F8VRH5 84 aa10.94□□□□□ -0.66
CDK4-208ENST00000551706 HIST3H2BBQ8N257 126 aa10.94□□□□□ -0.66
CDK4-208ENST00000551706 C11orf86A6NJI1 115 aa10.93□□□□□ -0.66
CDK4-208ENST00000551706 NDUFC2-KCTD14E9PQ53 114 aa10.93□□□□□ -0.66
CDK4-208ENST00000551706 NUPR1O60356 82 aa10.92□□□□□ -0.66
CDK4-208ENST00000551706 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
CDK4-208ENST00000551706 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
CDK4-208ENST00000551706 C7orf33Q8WU49 177 aa10.92□□□□□ -0.66
CDK4-208ENST00000551706 LRP1Q07954 4544 aaKnown RBP10.91□□□□□ -0.66
CDK4-208ENST00000551706 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
CDK4-208ENST00000551706 Q6ZRP5 223 aa10.91□□□□□ -0.66
CDK4-208ENST00000551706 FABP4P15090 132 aa10.89□□□□□ -0.67
CDK4-208ENST00000551706 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
CDK4-208ENST00000551706 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
CDK4-208ENST00000551706 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
CDK4-208ENST00000551706 ODF1Q14990 250 aa10.88□□□□□ -0.67
CDK4-208ENST00000551706 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
CDK4-208ENST00000551706 H0Y8G0 127 aa10.87□□□□□ -0.67
CDK4-208ENST00000551706 SFTA2Q6UW10 78 aa10.87□□□□□ -0.67
CDK4-208ENST00000551706 HIST1H2BLQ99880 126 aa10.87□□□□□ -0.67
CDK4-208ENST00000551706 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
CDK4-208ENST00000551706 KRTAP10-4P60372 401 aaPredicted RBP10.86□□□□□ -0.67
CDK4-208ENST00000551706 TMEM223A0PJW6 202 aa10.85□□□□□ -0.67
CDK4-208ENST00000551706 PLNP26678 52 aa10.85□□□□□ -0.67
CDK4-208ENST00000551706 RNF213Q63HN8 5207 aa10.84□□□□□ -0.67
CDK4-208ENST00000551706 FAT3Q8TDW7 4589 aa10.83□□□□□ -0.68
CDK4-208ENST00000551706 AKR1D1P51857 326 aa10.83□□□□□ -0.68
CDK4-208ENST00000551706 DPM2O94777 84 aa10.82□□□□□ -0.68
CDK4-208ENST00000551706 OXTP01178 125 aa10.82□□□□□ -0.68
CDK4-208ENST00000551706 C9orf129Q5T035 196 aaKnown RBP10.82□□□□□ -0.68
CDK4-208ENST00000551706 LOC105371267A0A1B0GV96 52 aa10.81□□□□□ -0.68
CDK4-208ENST00000551706 FAM168BA1KXE4 195 aa10.8□□□□□ -0.68
CDK4-208ENST00000551706 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
CDK4-208ENST00000551706 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
CDK4-208ENST00000551706 IGKCP01834 107 aa10.79□□□□□ -0.68
CDK4-208ENST00000551706 KRTDAPP60985 99 aa10.79□□□□□ -0.68
CDK4-208ENST00000551706 COX17Q14061 63 aa10.79□□□□□ -0.68
CDK4-208ENST00000551706 ZNF625Q96I27 306 aaPredicted RBP10.79□□□□□ -0.68
CDK4-208ENST00000551706 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
CDK4-208ENST00000551706 HERVK_113P61574 105 aa10.78□□□□□ -0.68
CDK4-208ENST00000551706 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
CDK4-208ENST00000551706 PHF5AQ7RTV0 110 aaKnown RBP10.78□□□□□ -0.68
CDK4-208ENST00000551706 ERG28Q9UKR5 140 aa10.78□□□□□ -0.68
CDK4-208ENST00000551706 M0QXV9 152 aa10.77□□□□□ -0.69
CDK4-208ENST00000551706 C20orf202A1L168 122 aa10.76□□□□□ -0.69
CDK4-208ENST00000551706 C3orf79P0CE67 100 aa10.76□□□□□ -0.69
CDK4-208ENST00000551706 PFN2P35080 140 aa10.76□□□□□ -0.69
CDK4-208ENST00000551706 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
CDK4-208ENST00000551706 PMCHL2Q9BQD1 86 aa10.76□□□□□ -0.69
CDK4-208ENST00000551706 PET117Q6UWS5 81 aa10.75□□□□□ -0.69
CDK4-208ENST00000551706 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms