RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 TOMM7Q9P0U1 55 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
LTBR-213ENST00000544454 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
LTBR-213ENST00000544454 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
LTBR-213ENST00000544454 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
LTBR-213ENST00000544454 CKS1BP61024 79 aa8.69□□□□□ -1.02
LTBR-213ENST00000544454 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
LTBR-213ENST00000544454 VPS13BQ7Z7G8 4022 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 NUPR1O60356 82 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 LEPROTL1O95214 131 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 GAGE2BQ13066 116 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 STPG4Q8N801 248 aa8.68□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BKO60814 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BJP06899 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BOP23527 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BBP33778 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BDP58876 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BCP62807 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST2H2BEQ16778 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BHQ93079 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BNQ99877 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 HIST1H2BMQ99879 126 aa8.67□□□□□ -1.02
LTBR-213ENST00000544454 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
LTBR-213ENST00000544454 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
LTBR-213ENST00000544454 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
LTBR-213ENST00000544454 CXCL5P42830 114 aa8.66□□□□□ -1.02
LTBR-213ENST00000544454 COX7B2Q8TF08 81 aa8.66□□□□□ -1.02
LTBR-213ENST00000544454 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
LTBR-213ENST00000544454 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
LTBR-213ENST00000544454 F8VRH5 84 aa8.65□□□□□ -1.02
LTBR-213ENST00000544454 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
LTBR-213ENST00000544454 RPL18AQ02543 176 aaKnown RBP8.65□□□□□ -1.02
LTBR-213ENST00000544454 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
LTBR-213ENST00000544454 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
LTBR-213ENST00000544454 TMEM170BQ5T4T1 132 aa8.64□□□□□ -1.03
LTBR-213ENST00000544454 Q6ZRP5 223 aa8.64□□□□□ -1.03
LTBR-213ENST00000544454 FABP4P15090 132 aa8.63□□□□□ -1.03
LTBR-213ENST00000544454 C9orf116Q5BN46 136 aaPredicted RBP8.63□□□□□ -1.03
LTBR-213ENST00000544454 A0A1W2PNN7 141 aa8.62□□□□□ -1.03
LTBR-213ENST00000544454 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
LTBR-213ENST00000544454 C7orf33Q8WU49 177 aa8.62□□□□□ -1.03
LTBR-213ENST00000544454 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
LTBR-213ENST00000544454 RPL37AP61513 92 aaKnown RBP8.61□□□□□ -1.03
LTBR-213ENST00000544454 ODF1Q14990 250 aa8.61□□□□□ -1.03
LTBR-213ENST00000544454 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
LTBR-213ENST00000544454 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
LTBR-213ENST00000544454 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
LTBR-213ENST00000544454 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
LTBR-213ENST00000544454 H0Y8G0 127 aa8.59□□□□□ -1.03
LTBR-213ENST00000544454 MAP1LC3CQ9BXW4 147 aa8.59□□□□□ -1.03
LTBR-213ENST00000544454 PLNP26678 52 aa8.58□□□□□ -1.04
LTBR-213ENST00000544454 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
LTBR-213ENST00000544454 DPM2O94777 84 aa8.56□□□□□ -1.04
LTBR-213ENST00000544454 C9orf129Q5T035 196 aaKnown RBP8.56□□□□□ -1.04
LTBR-213ENST00000544454 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
LTBR-213ENST00000544454 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
LTBR-213ENST00000544454 COX17Q14061 63 aa8.54□□□□□ -1.04
LTBR-213ENST00000544454 ZNF625Q96I27 306 aaPredicted RBP8.54□□□□□ -1.04
LTBR-213ENST00000544454 XAGE1AQ9HD64 81 aa8.54□□□□□ -1.04
LTBR-213ENST00000544454 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
LTBR-213ENST00000544454 IGKCP01834 107 aa8.53□□□□□ -1.04
LTBR-213ENST00000544454 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
LTBR-213ENST00000544454 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
LTBR-213ENST00000544454 PMCHL2Q9BQD1 86 aa8.53□□□□□ -1.04
LTBR-213ENST00000544454 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
LTBR-213ENST00000544454 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.05
LTBR-213ENST00000544454 PET117Q6UWS5 81 aa8.52□□□□□ -1.05
LTBR-213ENST00000544454 PHF5AQ7RTV0 110 aaKnown RBP8.52□□□□□ -1.05
LTBR-213ENST00000544454 PFN2P35080 140 aa8.51□□□□□ -1.05
LTBR-213ENST00000544454 HERVK_113P61574 105 aa8.51□□□□□ -1.05
LTBR-213ENST00000544454 M0QXV9 152 aa8.5□□□□□ -1.05
LTBR-213ENST00000544454 LEPROTO15243 131 aa8.5□□□□□ -1.05
LTBR-213ENST00000544454 HERV-K104P63124 156 aa8.5□□□□□ -1.05
LTBR-213ENST00000544454 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
LTBR-213ENST00000544454 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
LTBR-213ENST00000544454 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
LTBR-213ENST00000544454 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
LTBR-213ENST00000544454 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
LTBR-213ENST00000544454 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
LTBR-213ENST00000544454 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
LTBR-213ENST00000544454 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
LTBR-213ENST00000544454 LINC00587B1AMM8 73 aa8.48□□□□□ -1.05
LTBR-213ENST00000544454 HNRNPA3P51991 378 aaKnown RBP8.48□□□□□ -1.05
LTBR-213ENST00000544454 LBHQ53QV2 105 aaPredicted RBP8.48□□□□□ -1.05
LTBR-213ENST00000544454 SND1-IT1Q9HBX3 110 aa8.48□□□□□ -1.05
LTBR-213ENST00000544454 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
LTBR-213ENST00000544454 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
LTBR-213ENST00000544454 FLG2Q5D862 2391 aaPredicted RBP8.48□□□□□ -1.05
LTBR-213ENST00000544454 J3QQQ9 107 aa8.47□□□□□ -1.05
LTBR-213ENST00000544454 LINC00158P58513 81 aa8.47□□□□□ -1.05
LTBR-213ENST00000544454 KRTDAPP60985 99 aa8.47□□□□□ -1.05
LTBR-213ENST00000544454 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
LTBR-213ENST00000544454 UBE2BP63146 152 aa8.46□□□□□ -1.06
LTBR-213ENST00000544454 IGLV5-37A0A075B6J1 123 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms