RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 NDUFC2-KCTD14E9PQ53 114 aa6.42□□□□□ -1.38
NPIPB4-217ENST00000543449 HNRNPA3P51991 378 aaKnown RBP6.42□□□□□ -1.38
NPIPB4-217ENST00000543449 PMVKQ15126 192 aa6.42□□□□□ -1.38
NPIPB4-217ENST00000543449 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
NPIPB4-217ENST00000543449 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 A0A1W2PNN7 141 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 H3BRM9 83 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 ODF1Q14990 250 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 LINC00469Q8N7U9 141 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
NPIPB4-217ENST00000543449 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 F8VRH5 84 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 LINC00614P0C842 121 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 GAGE2EQ4V326 116 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 CST9LQ9H4G1 147 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 CDKN2A-AS1Q9UH64 79 aa6.4□□□□□ -1.38
NPIPB4-217ENST00000543449 ATP5LO75964 103 aa6.39□□□□□ -1.39
NPIPB4-217ENST00000543449 HBDP02042 147 aa6.39□□□□□ -1.39
NPIPB4-217ENST00000543449 ZC2HC1BQ5TFG8 222 aa6.39□□□□□ -1.39
NPIPB4-217ENST00000543449 C2orf82Q6UX34 121 aa6.38□□□□□ -1.39
NPIPB4-217ENST00000543449 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
NPIPB4-217ENST00000543449 SMIM1B2RUZ4 78 aa6.37□□□□□ -1.39
NPIPB4-217ENST00000543449 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
NPIPB4-217ENST00000543449 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
NPIPB4-217ENST00000543449 LINC01600Q96MT4 127 aa6.37□□□□□ -1.39
NPIPB4-217ENST00000543449 M0QXV9 152 aa6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 IGLC3P0DOY3 106 aa6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 UBE2BP63146 152 aa6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 LBHQ53QV2 105 aaPredicted RBP6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 C1orf137Q5JT78 98 aa6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 FAM19A5Q7Z5A7 132 aaPredicted RBP6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 CHCHD1Q96BP2 118 aaKnown RBP6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
NPIPB4-217ENST00000543449 NDUFA6P56556 154 aa6.35□□□□□ -1.39
NPIPB4-217ENST00000543449 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
NPIPB4-217ENST00000543449 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
NPIPB4-217ENST00000543449 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
NPIPB4-217ENST00000543449 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
NPIPB4-217ENST00000543449 NUPR1O60356 82 aa6.33□□□□□ -1.4
NPIPB4-217ENST00000543449 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
NPIPB4-217ENST00000543449 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
NPIPB4-217ENST00000543449 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
NPIPB4-217ENST00000543449 PLA2G2DQ9UNK4 145 aa6.33□□□□□ -1.4
NPIPB4-217ENST00000543449 A0A096LNJ9 63 aa6.32□□□□□ -1.4
NPIPB4-217ENST00000543449 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
NPIPB4-217ENST00000543449 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
NPIPB4-217ENST00000543449 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
NPIPB4-217ENST00000543449 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
NPIPB4-217ENST00000543449 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
NPIPB4-217ENST00000543449 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
NPIPB4-217ENST00000543449 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
NPIPB4-217ENST00000543449 COX17Q14061 63 aa6.31□□□□□ -1.4
NPIPB4-217ENST00000543449 HSBP1O75506 76 aa6.3□□□□□ -1.4
NPIPB4-217ENST00000543449 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
NPIPB4-217ENST00000543449 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
NPIPB4-217ENST00000543449 XAGE1AQ9HD64 81 aa6.3□□□□□ -1.4
NPIPB4-217ENST00000543449 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
NPIPB4-217ENST00000543449 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
NPIPB4-217ENST00000543449 H0Y9J4 135 aa6.29□□□□□ -1.4
NPIPB4-217ENST00000543449 PMCHL1Q16048 86 aa6.29□□□□□ -1.4
NPIPB4-217ENST00000543449 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
NPIPB4-217ENST00000543449 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
NPIPB4-217ENST00000543449 IGLV5-37A0A075B6J1 123 aa6.28□□□□□ -1.4
NPIPB4-217ENST00000543449 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
NPIPB4-217ENST00000543449 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
NPIPB4-217ENST00000543449 CBLN2Q8IUK8 224 aa6.28□□□□□ -1.4
NPIPB4-217ENST00000543449 HERC1Q15751 4861 aa6.28□□□□□ -1.4
NPIPB4-217ENST00000543449 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
NPIPB4-217ENST00000543449 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
NPIPB4-217ENST00000543449 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
NPIPB4-217ENST00000543449 ERG28Q9UKR5 140 aa6.27□□□□□ -1.41
NPIPB4-217ENST00000543449 IGLV1-50A0A075B6I6 118 aa6.26□□□□□ -1.41
NPIPB4-217ENST00000543449 ZNF861PO60384 105 aa6.26□□□□□ -1.41
NPIPB4-217ENST00000543449 TRGC2P03986 189 aa6.26□□□□□ -1.41
NPIPB4-217ENST00000543449 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
NPIPB4-217ENST00000543449 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
NPIPB4-217ENST00000543449 LEPROTL1O95214 131 aa6.25□□□□□ -1.41
NPIPB4-217ENST00000543449 PFN2P35080 140 aa6.25□□□□□ -1.41
NPIPB4-217ENST00000543449 HSPB8Q9UJY1 196 aa6.25□□□□□ -1.41
NPIPB4-217ENST00000543449 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 BCE1O60756 84 aa6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 ATP6V1G1O75348 118 aa6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 HERV-K104P63124 156 aa6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
NPIPB4-217ENST00000543449 PLNP26678 52 aa6.23□□□□□ -1.41
NPIPB4-217ENST00000543449 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
NPIPB4-217ENST00000543449 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
NPIPB4-217ENST00000543449 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
NPIPB4-217ENST00000543449 SERF1AO75920 110 aa6.22□□□□□ -1.41
NPIPB4-217ENST00000543449 HERVK_113P61574 105 aa6.22□□□□□ -1.41
NPIPB4-217ENST00000543449 SLC7A5P1Q8MH63 180 aa6.22□□□□□ -1.41
NPIPB4-217ENST00000543449 FAM19A2Q8N3H0 131 aa6.22□□□□□ -1.41
NPIPB4-217ENST00000543449 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms