RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 TRAV8-4A0A0B4J246 113 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 H3BMG7 143 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 UBE2D1P51668 147 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 CKS1BP61024 79 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 TNP2Q05952 138 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 FOXI1Q12951 378 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 FAM19A3Q7Z5A8 133 aa7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-210ENST00000542817 IGKV2D-24A0A075B6R9 120 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 TRAV13-1A0A0B4J241 112 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 LINC01549A6NIU2 74 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 M0QXV9 152 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 CRPP02741 224 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 COX6A2Q02221 97 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
NPIPB3-210ENST00000542817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-210ENST00000542817 PLNP26678 52 aa7.03□□□□□ -1.28
NPIPB3-210ENST00000542817 LYRM7Q5U5X0 104 aa7.03□□□□□ -1.28
NPIPB3-210ENST00000542817 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 IGHV3OR16-9A0A0B4J2B5 98 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 A0A1B0GVY2 172 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 PRSS1P07477 247 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 XCL1P47992 114 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 PMVKQ15126 192 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 NAA38Q9BRA0 125 aaKnown RBP7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 NHP2Q9NX24 153 aaKnown RBP7.02□□□□□ -1.28
NPIPB3-210ENST00000542817 IGLV4-69A0A075B6H9 119 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 A0A087WTM6 91 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 A0A0J9YXV3 536 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 CD164L2Q6UWJ8 174 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 LINC01600Q96MT4 127 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 RYR1P21817 5038 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 LECT2O14960 151 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 TSPAN13O95857 204 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 SS18Q15532 418 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 ETDBQ3ZM63 59 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 C15orf56Q8N910 161 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 RMI2Q96E14 147 aa7.01□□□□□ -1.29
NPIPB3-210ENST00000542817 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
NPIPB3-210ENST00000542817 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
NPIPB3-210ENST00000542817 KRTAP10-2P60368 255 aa7□□□□□ -1.29
NPIPB3-210ENST00000542817 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
NPIPB3-210ENST00000542817 NTN5Q8WTR8 489 aaPredicted RBP7□□□□□ -1.29
NPIPB3-210ENST00000542817 MYMXA0A1B0GTQ4 84 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 F8VRH5 84 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 SLPIP03973 132 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 FUSP35637 526 aaKnown RBP eCLIP6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 LINC00336Q6ZUF6 198 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 PPDPFLQ8WWR9 84 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 HIST1H4GQ99525 98 aa6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
NPIPB3-210ENST00000542817 A0A087WZ39 114 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 TINCRA0A1B0GVN0 87 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 C11orf86A6NJI1 115 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 APOMO95445 188 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 MRPL35Q9NZE8 188 aaKnown RBP6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
NPIPB3-210ENST00000542817 COX7A2LO14548 114 aa6.97□□□□□ -1.29
NPIPB3-210ENST00000542817 PSCAO43653 123 aa6.97□□□□□ -1.29
NPIPB3-210ENST00000542817 Q8N814 137 aa6.97□□□□□ -1.29
NPIPB3-210ENST00000542817 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
NPIPB3-210ENST00000542817 HSPG2P98160 4391 aa6.97□□□□□ -1.29
NPIPB3-210ENST00000542817 K7ERJ3 54 aa6.96□□□□□ -1.3
NPIPB3-210ENST00000542817 ZNF22P17026 224 aaPredicted RBP6.96□□□□□ -1.3
NPIPB3-210ENST00000542817 KIAA0087Q14695 138 aa6.96□□□□□ -1.3
NPIPB3-210ENST00000542817 TEN1Q86WV5 123 aa6.96□□□□□ -1.3
NPIPB3-210ENST00000542817 FAT1Q14517 4588 aa6.96□□□□□ -1.3
NPIPB3-210ENST00000542817 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 HERVK_113P63121 156 aa6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 Q6Q795 121 aa6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 LINC00526Q96FQ7 95 aa6.95□□□□□ -1.3
NPIPB3-210ENST00000542817 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
NPIPB3-210ENST00000542817 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
NPIPB3-210ENST00000542817 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
NPIPB3-210ENST00000542817 HIGD2BQ4VC39 106 aa6.94□□□□□ -1.3
NPIPB3-210ENST00000542817 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
NPIPB3-210ENST00000542817 IGLV5-39A0A0G2JS06 123 aa6.93□□□□□ -1.3
NPIPB3-210ENST00000542817 HERC2O95714 4834 aa6.92□□□□□ -1.3
NPIPB3-210ENST00000542817 CNBPP62633 177 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-210ENST00000542817 SPANXDQ9BXN6 97 aa6.92□□□□□ -1.3
NPIPB3-210ENST00000542817 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
NPIPB3-210ENST00000542817 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-210ENST00000542817 TMEM223A0PJW6 202 aa6.91□□□□□ -1.3
NPIPB3-210ENST00000542817 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
NPIPB3-210ENST00000542817 CARD19Q96LW7 228 aa6.91□□□□□ -1.3
NPIPB3-210ENST00000542817 MALP21145 153 aa6.9□□□□□ -1.3
NPIPB3-210ENST00000542817 HERVK_113P61574 105 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms