RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 COX7CP15954 63 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 IGLV1-51P01701 117 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 ENHOQ6UWT2 76 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
PRKAB1-207ENST00000542698 PSCAO43653 123 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 COX7BP24311 80 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 ATP5EP2Q5VTU8 51 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 C20orf197Q8N268 126 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 IGLV5-45A0A087WSX0 123 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 FHL2Q14192 279 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 Q8N2B8 174 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 SERP2Q8N6R1 65 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 FUSP35637 526 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
PRKAB1-207ENST00000542698 A0A087WYN8 130 aa5.82□□□□□ -1.48
PRKAB1-207ENST00000542698 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
PRKAB1-207ENST00000542698 COX17Q14061 63 aa5.82□□□□□ -1.48
PRKAB1-207ENST00000542698 AKAP13Q12802 2813 aa5.82□□□□□ -1.48
PRKAB1-207ENST00000542698 Q6ZQY7 126 aa5.82□□□□□ -1.48
PRKAB1-207ENST00000542698 PRR3P79522 188 aaKnown RBP5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 KIR2DL5BQ8NHK3 375 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 RMI2Q96E14 147 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 LITAFQ99732 161 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 SMG1Q96Q15 3661 aaKnown RBP5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 MIFP14174 115 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 SHISA2Q6UWI4 295 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 IGHV3OR16-9A0A0B4J2B5 98 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 Q6JHZ5 121 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 SOSTDC1Q6X4U4 206 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 UBE2DNLQ8IWF7 75 aa5.81□□□□□ -1.48
PRKAB1-207ENST00000542698 HILS1P60008 231 aa5.8□□□□□ -1.48
PRKAB1-207ENST00000542698 IGHV4-28A0A0C4DH34 117 aa5.8□□□□□ -1.48
PRKAB1-207ENST00000542698 TRBV7-7A0A0K0K1E9 115 aa5.8□□□□□ -1.48
PRKAB1-207ENST00000542698 UBE2BP63146 152 aa5.8□□□□□ -1.48
PRKAB1-207ENST00000542698 FAM110AQ9BQ89 295 aa5.8□□□□□ -1.48
PRKAB1-207ENST00000542698 CCKP06307 115 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 Q8N814 137 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 CYSRT1A8MQ03 144 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 UNQ6190/PRO20217Q6UXQ8 127 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 KALRNO60229 2985 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 LELP1Q5T871 98 aa5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 KLK5Q9Y337 293 aaPredicted RBP5.79□□□□□ -1.48
PRKAB1-207ENST00000542698 A0A087WVE0 104 aa5.78□□□□□ -1.48
PRKAB1-207ENST00000542698 FHL3Q13643 280 aa5.78□□□□□ -1.48
PRKAB1-207ENST00000542698 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.78□□□□□ -1.48
PRKAB1-207ENST00000542698 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
PRKAB1-207ENST00000542698 ATMQ13315 3056 aa5.78□□□□□ -1.48
PRKAB1-207ENST00000542698 MUC7Q8TAX7 377 aa5.77□□□□□ -1.48
PRKAB1-207ENST00000542698 TMEM258P61165 79 aa5.77□□□□□ -1.49
PRKAB1-207ENST00000542698 SCXQ7RTU7 201 aa5.77□□□□□ -1.49
PRKAB1-207ENST00000542698 BPY2O14599 106 aa5.77□□□□□ -1.49
PRKAB1-207ENST00000542698 EIF4EBP3O60516 100 aaPredicted RBP5.77□□□□□ -1.49
PRKAB1-207ENST00000542698 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
PRKAB1-207ENST00000542698 FAM218AQ96MZ4 157 aa5.77□□□□□ -1.49
PRKAB1-207ENST00000542698 BSNQ9UPA5 3926 aa5.76□□□□□ -1.49
PRKAB1-207ENST00000542698 DMXL2Q8TDJ6 3036 aa5.76□□□□□ -1.49
PRKAB1-207ENST00000542698 INAFM1C9JVW0 142 aa5.76□□□□□ -1.49
PRKAB1-207ENST00000542698 NDUFC2O95298 119 aa5.76□□□□□ -1.49
PRKAB1-207ENST00000542698 MRAPQ8TCY5 172 aa5.75□□□□□ -1.49
PRKAB1-207ENST00000542698 A8MTW9 85 aa5.75□□□□□ -1.49
PRKAB1-207ENST00000542698 ZNF73O43830 326 aaPredicted RBP5.75□□□□□ -1.49
PRKAB1-207ENST00000542698 HELZ2Q9BYK8 2649 aaKnown RBP5.75□□□□□ -1.49
PRKAB1-207ENST00000542698 C16orf95Q9H693 158 aa5.75□□□□□ -1.49
PRKAB1-207ENST00000542698 FLNAP21333 2647 aaKnown RBP5.75□□□□□ -1.49
PRKAB1-207ENST00000542698 F8P00451 2351 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 SYCNQ0VAF6 134 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 KPRPQ5T749 579 aaPredicted RBP5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 TACC2O95359 2948 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 FSHBP01225 129 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 C11orf45Q8TAV5 145 aa5.74□□□□□ -1.49
PRKAB1-207ENST00000542698 DEFB131BA0A096LNP1 70 aa5.73□□□□□ -1.49
PRKAB1-207ENST00000542698 M0R378 163 aa5.73□□□□□ -1.49
PRKAB1-207ENST00000542698 GCN1Q92616 2671 aaKnown RBP5.73□□□□□ -1.49
PRKAB1-207ENST00000542698 LINC01561Q8N1V8 128 aa5.73□□□□□ -1.49
PRKAB1-207ENST00000542698 TRBV10-3A0A0K0K1G6 114 aa5.73□□□□□ -1.49
PRKAB1-207ENST00000542698 LY6G6DO95868 133 aa5.73□□□□□ -1.49
PRKAB1-207ENST00000542698 SMR3AQ99954 134 aa5.72□□□□□ -1.49
PRKAB1-207ENST00000542698 ITPR3Q14573 2671 aa5.72□□□□□ -1.49
PRKAB1-207ENST00000542698 IGKV2-28A0A075B6P5 120 aa5.72□□□□□ -1.49
PRKAB1-207ENST00000542698 IGKV2D-28P01615 120 aa5.72□□□□□ -1.49
PRKAB1-207ENST00000542698 C6orf223Q8N319 242 aa5.72□□□□□ -1.49
PRKAB1-207ENST00000542698 CDK2AP2O75956 126 aa5.71□□□□□ -1.49
PRKAB1-207ENST00000542698 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.49
PRKAB1-207ENST00000542698 IGHV4-30-4P0DP06 118 aa5.71□□□□□ -1.5
PRKAB1-207ENST00000542698 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
PRKAB1-207ENST00000542698 DCHS1Q96JQ0 3298 aa5.71□□□□□ -1.5
PRKAB1-207ENST00000542698 SNURFQ9Y675 71 aa5.71□□□□□ -1.5
PRKAB1-207ENST00000542698 C3orf84H3BNL1 204 aa5.71□□□□□ -1.5
PRKAB1-207ENST00000542698 CFAP46Q8IYW2 2715 aa5.7□□□□□ -1.5
PRKAB1-207ENST00000542698 NHLRC4P0CG21 123 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms